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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0200000 |
| Transcript ID | LotjaGi3g1v0200000.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Macrophage migration inhibitory factor family protein; TAIR: AT5G01650.2 Tautomerase/MIF superfamily protein; Swiss-Prot: sp|P81748|MIFH_TRITR Macrophage migration inhibitory factor homolog; TrEMBL-Plants: tr|A0A0S3RUB9|A0A0S3RUB9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0200000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:29162485..29164498) extracted from Lotus japonicus Gifu genome v1.2.
ATGCCGTGCCTTAACCTCTCCACCAACGTCAACCTCGACGGCGTCGACACCTCTTCCATCCTCTCCGAAGCCACCTCCAC CGTCGCCACCCTTATCGGAAAACCTGAGGCCGTACGCTCCCTCACACCTTCTCTCCTTGCAATTTCCATTTATGCTTATT ATTCGTTATTTGTATCCGAAATAGTGAAATTGAATTAGGATCGTATGAGTTGTGGATAGTTTTCTCTGCTTGCAAAACAA TTATTTTGAGGATTTTTTTGATACAAAGGATTTGTGACTGGTGAGTGTGCTGGTCTCATATATATGGTTCCTATTTGTCT CTGTTTGACATTTTTGATGGATGGTTGAATGTACGGTTGAATGTAAACTAGTTAGGATTTCGATGATTTGCAGCTGAGCT GATAATATGCTACAATAGAGTTTTTTTTTGGGGGGGGGGGGGTGTTCAAGTTGGGTTTTTTTAGAGTTGGTGTTGTACAT GAGTTTCTATGAGATACTCTTTTGGTTTTCCTTTATGGTCTTCTGCAATATAATGGTACGGCCGGAAGTCCCTATTTATT TTACTGGTCCAGTGCTGTATTTGCTGAATTGCTCATTTGAATCAGTGTAGTCTAAGGCTTCTAATGCCACATGTAACGCA CTGCCCTTGCGCCCTAGGTTATGTTTGTCAGTTTTGAGGGGAGGGGAAGACTTTGAGAGGAAGGGAAGGAGAAGGTGAAG AGAGGGCAAGCCCTCCCCTTATTTGGAAGTTCATAATCCCACAAAACTTTCCAATTCGGGGGAACTCATAAAACAACTGG ATTGAGGGGGCTAGAGGTATTTTCAGAAATACCCCCAACCCTATTCCCCCACTTTAGAAAAACTCCTAAACAAGGGGTGG GTTTCTCATAAGCCTCTGTCTTCCCTTTCCCTACCCTCCAAAACCCAACTTACTAACAAAGCATTAGTTTCTTTAATATT TGGTCTTTGTGATTAGGTTTTAATTTTATGATGAATTTTATTCTTGAGGGGCTATGTCTGAATGGTGCGGAATGGGATCA TATAAGTTCCATTTTTTCTTTGGATTGTTTAAACTAAGTGTGATGGAAGTAAACATGATGGAATGCATTCCATCCCCATC GAATATCCTATTTTTTCTTCTCTGCCAATTTGAGCAGAATGGATGGATAAAGTCTTTTATCCCATTCCATCACTTGAATA TCCAAACAATGAAATGGTAGCTTTATTCCCTTCCTCTCCATTTTTACTTCATTCCATTATATCTTTTAACTATTCTTTCC CACTCTCCAATAGATATCCAAACGCAACCTTTATCCTTTAATTGATATGGAAAATTAAATGATCAAATAATTTACTGTCT GTTCTTTTTCTACTGTTGATGCATTTCTTGAGTGAGCTGTGCTTTGGTGCCACTTGCTTTAAGATGATAATACTGCCTGG CACCTTTATTCTTTGGCCAACAGTTTTCTTGGGTGAATACGAAGAATGTTTCTTATAAATGCTGGATCCATAGTATTATA CATACATTGAATTGAATTGCTTTCTATGGTTGGTATTTAATTTTTCTCTTGTTCTATATCTGTATTTCTTTCTTTGCAAG AAAGTTTATTGCTTTGACTTGTTCAGAATGTCATATAAAGCCTTATTATTCTGATCTTTGTTTATCTGCAGTATGTGATG ATTGTCCTGAAAGGATCAGTACCCGTGTCTTTTGGTGGAACTGAGCAACCAGCAGCTTATGGAGAATTGGTGTCCATCGG TGGTCTTAACCCTGATGTGAATAAGAAACTTAGTGCTGCAATTGCTTCAATTCTTGAAACCAAGTTGTCCGTGCCCAAGT CACGATTCTTCTTAAAATTCTATGACACTAAGGCAAGTGTATAAATTCTGAGTTGCCCTGAAAAGAAGGGTCATTGCCCT GCACTCTTTTTCTTATTGCATTTTTTCCCTTTTTGTTTAGGCCCATCAGAGTCAAGAATATGCACAATGTTTGCATGCTT TGCATCAGCACTAG
CDS sequence (LotjaGi3g1v0200000.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCGTGCCTTAACCTCTCCACCAACGTCAACCTCGACGGCGTCGACACCTCTTCCATCCTCTCCGAAGCCACCTCCAC CGTCGCCACCCTTATCGGAAAACCTGAGGCCTATGTGATGATTGTCCTGAAAGGATCAGTACCCGTGTCTTTTGGTGGAA CTGAGCAACCAGCAGCTTATGGAGAATTGGTGTCCATCGGTGGTCTTAACCCTGATGTGAATAAGAAACTTAGTGCTGCA ATTGCTTCAATTCTTGAAACCAAGTTGTCCGTGCCCAAGTCACGATTCTTCTTAAAATTCTATGACACTAAGGCCCATCA GAGTCAAGAATATGCACAATGTTTGCATGCTTTGCATCAGCACTAG
Protein sequence (LotjaGi3g1v0200000.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPCLNLSTNVNLDGVDTSSILSEATSTVATLIGKPEAYVMIVLKGSVPVSFGGTEQPAAYGELVSIGGLNPDVNKKLSAA IASILETKLSVPKSRFFLKFYDTKAHQSQEYAQCLHALHQH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 121 | 121 | 6.7E-73 | – | |
| PANTHER | 1 | 121 | 121 | 6.7E-73 | ||
| SUPERFAMILY | 1 | 106 | 106 | 4.4E-29 | ||
| Pfam | 2 | 107 | 106 | 4.5E-18 | ||
| Gene3D | 2 | 102 | 101 | 4.7E-36 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0200000.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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