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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0229000 |
| Transcript ID | LotjaGi3g1v0229000.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alpha-(1,6)-fucosyltransferase; TAIR: AT5G28910.2 alpha-(1,6)-fucosyltransferase; Swiss-Prot: sp|A1BF69|COBT_CHLPD Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; TrEMBL-Plants: tr|A0A0R0EFX5|A0A0R0EFX5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0229000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:35803306..35809336) extracted from Lotus japonicus Gifu genome v1.2.
CACATATTCTATTGGAGTTTGGAAGCCACCACCACTCTTCCCTCTTCTCATGGTTCTTGAACACTGCATCATGTGTATGT CTTTTGTTCTGCTTCCTAAGCATAAACAAATGTACCGAACCTGTTAAGGATACTGGTAATAAAAGCTACCTTCTCGAGTG AAATGGACGCAGTGAACCAAAAATACATTGAGAGAGCGGTTTCGCAGAGAGCACTGCAAATGGGTTCCTCGTTTTCTTGT CAAATCTGTGTTGTGGGGTTTCTCTCTGGAGTCTGCCTCACCTCTCTGTTCCTGGCTGCTTTGACTTCGACTTCCACCTC TTTGTTTCGTCCCATTTCATTTTCAACCATGTCACTAGGGAATTCAACTTCTGATGATTACAACAATGACAGAGTCTCAT TGCTTTACTCAGCTTGGAGTGCTGCTTTAATGCTGAATAAATCTGCAACTGGGAGAAATGGTGATGAGTACTTGCAGCAG TTGCAGCAGCAGAAACATGGTGGAATATATAGTAATTTGCCTAATGCTCCACATTTGGAAAACTGTGAGGCGAAAACACA GCTGTTTGGAAACCTTGATAAGCGTGAAGGAAATGAGAGGTTCCCTCCATGGACAAGTTGGAAGGGATTTCTACACACAT TCCCTGTTGATCTTCGGCTGCAGAATCAGGCTGCATCTGAGGGGGCTTATCCACCGTGGGTACGTTCTTAATTATTTTTC AAGTGCTGGATTCATCATAACTTACTTAGTTAACTCACAAACGTGATTTGTTTACCTTTGTTGGTGCTAATATTTGGTTT ATGGTTACCTCAAAGTCACCTTTTCATGGCCAATTCTTGTTTTCGTAGTTAGTAATATGTTTCTTAAATCCTTTTTAACT GTTTTGAAGCAGATTTTATTGCAATAGTTGATTGACCTGAGATAATAGATATAGACAAGTAACTCCTTTAAAAGAATAGA ACAATCATATCTGAGAAAGCTTTTGCTGGTATCTTAGTCTAGTCTAAGTTCGTTTATTTGGTCATCCATAAATGAGTCAC TGGCACTGCATATGTCTGGTTCTCTAAATTTGCAATCTACATATCCAGTGTTGGACGTGAAGAAGTATGCTGGTAAGTCT CGCATTGACTAAAAATATGACAAAGTATGTCCTTATAAAGAGTAGAGTAAAAATTGTTTGAGTGGCGCAGCGGAACATAA GACTCTTCACATATAATGATTCATGAGGGAGTTGGGAGTTCAGCATCGTACATTGAACACAAAACATAAGTGATTTGGAC ATCATCCACATTTATTAACCCGAATTCTAAAATTTTCTCCACTAGATACTAGATACTGTCAATCTTCAAACAAATCTTTC CTAACAAGATGTTCTGAGAAACAAGTTTACAAAGAATCTTTCTTCAATAAAAAACCCATGACTCTAACATTACTAATAGA AGCACACCATATGAGGCAGATTTATGAACTTCATTAGGACAAATACAATGTTCATTGTTTAGTTAAAAGATGAGGTGGAA TTCATGTTGGAATTACTGGCCAGTTTGTTACTTAACATGGAAGCTTTTGCAGATTGCAGGATCTGATGAAGAAAATTATC CATTGACAAGAAAAGTGCAGCGTGACTTGTGGATCCACCAGCACCCTTTAAACTGTAACCACCCGAATGTGAAGTTCCTT GTTGCTGACTGGGAGAGATTTCATGGATATGGTATTGGAGCTCAGATTGCTTCCATGTGTGGACTTCTTGGAATTGCGAT CAACGAAGGAAGAGTCCTTATAACAAACTATTATAACAGGGCTGATCATGATGCTTGTGAAGGAACTTCCAGAGTTCCAG GTCTAGTTGGGACTGTTACTTCTTTCCAGAAACATCCTCAGAATGCCGCCAGCGCGCATTCGAGCTCATGAACAATGAAG AGGCACAGAGCAGGGGGATTGTGACCACAAAAGAAAATTATACATCCAAGCATGTATGGGCTGGACCAACTCCTAGGTAA TTATAAGGCTTGGCTTAATTCCACTTTGGGCCCCTGATGTTTCACAAATGTGCGGTCTGCATCCCCCCATGTCTAAAATG TGCGTCAAGCTCCTTCATGTTTCTAAAGCGGTCGATTAAAGCCCTTCCGTCCATCTCCGTTAGTTGACTAACGAAAATGC TGACGTGTCACTTTTTTAATCAATAAAATATTTATTTTTTAAAACAAAATAAATAAATACTAAAAATTTTCAAAAACATA AAATTCAGAAATCCAGGTTCAAGCAGCACTCATGTTCAAATGCAACCCAGTTCAAAACCCTAAATCCAGAACTCGTCAGC TTCTACTCTCACAAACCCCAGATCCAAACCCAAACCCATAAATCACAGAGAATCGAAGAAATAGAAGGGAAGACGTTGGG TTTGGTATCTGAAATCCAAACCATAAATGCACAACCCAGTAGTCAGATCCGTTGCAGAAAGGCCTTGACAACACAAATCG AATGGAGAGTTGATGGTGCGGGCTTGGTCGGCGGCAAAAGGCTCTGAAGGTGTCGTCGTCGACAAAGAAGGCTTTGGTGA GAGCAGAATCTTCTGAAGCGATTCCAGATTCGAATTCATCTCTGCCAGATTCGTCATCGCTTTGCATCATCAGTCCCCTT TCCTTTTCTCTTCAGATATGTGAGCATCTGGGCACTAGGGGTGATGAATTGTTGATGGGTTTGGTGAAGAAAACCCAGAT CCATACACAATAACAAGCACCCCAACCCGAAAATCCTCACCCATAACAGAACCAAGAAGGAAAAAGGGAGAGAAAGGGGA GGAAGATTGAAGGGTTCAGATTTTTGAAGCTTTTTCACAGTACATCACACATGAAGAAGAAGAAGAAAGTGATTGAGGTT CGGGAACAGTAGTTGCGGTGGCTGAGGCTGCAACTAATCTTTTAAAAATATTTGGGTTTTTTTAAACAGATATTTAGGGT TGGGGTTCTGGGTTTGGATTGGGTTGTATGAATTTGGGAAAGTTGAAAAGATTATTAGTTTTTTTTTCTTAAATTAAAAA TTAATGGGTTTTAAGTTCAGGAGTTGAAGATGATATATAAGAGATGAATTTTATGCTTTTGTAAAATTTTAAAATTTATT TATTTATTTTATTTTTAAAAATAATATTTTATTGATTAAATAAGTGATACATTAGTATTTCCGTTAGTCAACTAACGGAG ATGGACGGAAGGGCTTTAATCGACCGCTTTAGAAACATGAAGGAGCTTGAGCGCACATTTTAGATATGGGGGATGCAGAC CGCACATTTGTGAAACATCAGGGACCCAAAGTAGAATTAAGCCTAATTATAATCATCCAATCTGATGATCTCAGAGTTAA CTGCAATTTATGACTATTGAATGTTTTTTATTCTTCCAATTCCAATGCTTCCTTCTTGCAGAAAGTGGGGTCTTCCATGG AATAATATGCAACCTACAACTGATATAAACGGAACTCTGTTGGCTTCTCATAGAAAAATGGATAGACGGTGGTGGAGAGC ACAGGTACTTGTTCTCTGGATTAATGAAATCTTCAGTCTTATTTTCTGTTCCACCAATAAAATTTTGACATGCGTAACTA CTCCAATCCTATATTTTTTAATTGATATGCTAACATTTCATTAATGGAACATGGAATTGATATGCTAACATTTCATTAAT GGAACATGGAATTGAGACACTATTTTAGGTTCAAAAATCTGTATTTGCAAAAAGGGAACTATGTCCTCGTTTTAGCAACA CTTCATGATTTAATCTTGTTGCCATAAATGTTGCTTTTAGGCTGTACGCTACTTAATGAGGTTCCCTACTGAATACACAT GCAATTTGATGAATGAGGCTCGCCATGATGCCTTTGGAAAATTAGCTGCCAAAATGGTTCTTGAAAGCCTTGGTGAAAAC TGGCCGAAGGTGGGTTTGTCTTAATTCTTAAATATACAATGTTTTTCTCAATGGACAAAAGAGACTACTTTAATTTGCAT CTAAATGACCATGAGAAGAATGAACCCAAATCCTTAAATACCCAACCTGACGTTGACCTAAACATAAAATCTGACTTGAT GTCGATCTAAATTGTAAACCACACCAAAATCCTAACTCGACGTCAATCTAAATCCTAAATCCAACTCGATGTTGACCTAA ATCCTAAATATGACCAGATGGCATCATAAACCATAAATCCGACCCAACATGACTCGCTTGACTCCATGTTGGCCTAAATC CTAAATTCGACTTAATCTGACCCGATAACGACCAAAGCCCAGAATCTAAACCGGCGTGACTCGCCTGAATCAATGCCGAA CTAAACCCTAAATCCGACCGGACAATGACGTTATCCCTAAATCCGACCAGACGCCGACCTAAACCCTGAGTCCTCCCCAA CGCGACTCGCCTATCTCGATAAGCTAATGCCAATTCTTTCCGCCATGTGTGTGTGTGTTGTCAAGCTCTATATTGGGTTT GCGTTGTTAGTTTGATCTCCACAGATGGCCATTGCCATCTACTGAGTTGAATTCACTTTTCACTTGAGATCAGGGTTGTT GTGCTGGCTTAGTGTAGTTTGTTTCTTTATTTCTATTATTCACCAAAAATAAATAAACTTAAATGTTTAAAAATGACCTT GTAAATAGGAATATATTATATCAAATTAACTAATTAGGACACTTTGTGCTCCTGTGAGGCGGTCAGACAAGCTTTCACCT GTGTTTTTATCATAATATTATTTATTTTTGTTAAATTACTCTCGCGCGCAATTTCATCTCGGGTGTGGTGAAGGTCAAAG ATCCCCTCAAGAGTACGGCTTCTAAGTATTGAACTCTTGACCAAACAACGACTTTTTACTACTGTGAACGGGACTCGTTG GGTTTTCATCCTAGTATTAGATAGTACTTTGTAGAATTGAGCAATTTATTTGTAAAACTTATACACTTACATTTACTCCT CTGCCACAGGAAATTAAGGACAAGCCAAGGTCCTCTGAAATTGAAGAATATGTGTGGTCCAATCACAAGCCTTGGGTCCC TACGCCTCTTCTAAGCATGCATGTAAGGATAGGAGACAAAGCACTTGAAATGAAGGTTGTTGAATTTGAAGAATACATGC AGCTTGCTGAACAGATTCGAAAGCACTTCCCAAACCTTAATAACATTTGGTTGTCCACTGAGATGCAGGTACCAAACTTT GATCTTTCTTATTCTTAATCATATATTTTGAGTCATTTTAGATGTTGTTTTAGTTTATTGTACACTCTAATAACATTATG AAGTTTGATTCAGCAAGTCATTGACAAAACGAGAGAATATCCTCAGTGGAACTTTCACTACACAAAGGTAAGACGCCAAG TTAAGAATAATATGTCAATGGCAGTGTATGAAGCCAGCTTGGGTAGAAAGACCAGCACTAACTATCCACTAGTTAATTTC TTGATGGCTGCAGACTCGAACTTTTTTGTTGGAGCATTGGGTTCTACATGGTCTTTTTTTATTGATGGAATGAGAAATAC TGGGGGGAAGGTAATGGCGGGCTACTTGAGTGTCAACAAGGATAGATTTTGGTAGAGTAGGCCTTGCAATTATTAGAATA TTTGTAACCATGGTAATAATATGATTCTTAATTTGTGTATATATTGTAGCGTGATCTCTTTAAATGATTTAGCAAGCTAT TGGAACCATGAGGATATCCAGGGTATCAGGCAGCTGATGACTACCTTTGAGGAGATTAATTTGGTAACCATTGAGCGGGA TAAGAACAATGCAGCAGACGCTCTAGCTCGGGAAGTATGTAGAACTGGGACGCCGTTTCAATGGTGGAATAACCCTCCCT CTTTTGTTTATGCATCACTGTATTAAGATGCAATTAGTTAGTTTTCCTCTACTATTAATTTTCCTCTTGTAACCAAAAAA TTTAAAGAGTAATCATGAAAGCTAAGAATCCAAGTGTCAACAAGTGCTTGCTTAACTTAAGCCAGATCAAGGCGAGCTAT CTAAAATGATGTGTACCAATAAAAAAATAGG
CDS sequence (LotjaGi3g1v0229000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACAATGAAGAGGCACAGAGCAGGGGGATTGTGACCACAAAAGAAAATTATACATCCAAGCATGTATGGGCTGGACC AACTCCTAGAAAGTGGGGTCTTCCATGGAATAATATGCAACCTACAACTGATATAAACGGAACTCTGTTGGCTTCTCATA GAAAAATGGATAGACGGTGGTGGAGAGCACAGGAAATTAAGGACAAGCCAAGGTCCTCTGAAATTGAAGAATATGTGTGG TCCAATCACAAGCCTTGGGTCCCTACGCCTCTTCTAAGCATGCATGTAAGGATAGGAGACAAAGCACTTGAAATGAAGGT TGTTGAATTTGAAGAATACATGCAGCTTGCTGAACAGATTCGAAAGCACTTCCCAAACCTTAATAACATTTGGTTGTCCA CTGAGATGCAGCAAGTCATTGACAAAACGAGAGAATATCCTCAGTGGAACTTTCACTACACAAAGGTAAGACGCCAAGTT AAGAATAATATGTCAATGGCAGTGTATGAAGCCAGCTTGGGTAGAAAGACCAGCACTAACTATCCACTAGTTAATTTCTT GATGGCTGCAGACTCGAACTTTTTTGTTGGAGCATTGGGTTCTACATGGTCTTTTTTTATTGATGGAATGAGAAATACTG GGGGGAAGGTAATGGCGGGCTACTTGAGTGTCAACAAGGATAGATTTTGGTAG
Protein sequence (LotjaGi3g1v0229000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNNEEAQSRGIVTTKENYTSKHVWAGPTPRKWGLPWNNMQPTTDINGTLLASHRKMDRRWWRAQEIKDKPRSSEIEEYVW SNHKPWVPTPLLSMHVRIGDKALEMKVVEFEEYMQLAEQIRKHFPNLNNIWLSTEMQQVIDKTREYPQWNFHYTKVRRQV KNNMSMAVYEASLGRKTSTNYPLVNFLMAADSNFFVGALGSTWSFFIDGMRNTGGKVMAGYLSVNKDRFW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 67 | 67 | 2.0E-119 | – | |
| PANTHER | 1 | 67 | 67 | 2.0E-119 | – | |
| Gene3D | 11 | 218 | 208 | 1.1E-11 | – | |
| PANTHER | 79 | 230 | 152 | 2.0E-119 | – | |
| PANTHER | 79 | 230 | 152 | 2.0E-119 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0229000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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