Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi3g1v0247600.1

Overview

Field Value
Gene ID LotjaGi3g1v0247600
Transcript ID LotjaGi3g1v0247600.1
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Methyltransferase; TAIR: AT1G23360.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|P67056|MENG_LISIN Demethylmenaquinone methyltransferase; TrEMBL-Plants: tr|I1LSB3|I1LSB3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0247600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:40842292..40847530) extracted from Lotus japonicus Gifu genome v1.2.

GATTATGTCACTGTGGTCTGTCCCTTCCACACCACACACACAACACAGAATGTCTCTGTCGTCCCCACTTCAGAACCTCC CTGCGATAATCTCCACGAACGGTAACGCCACCGCAACGGCGAGGGCAGCGAAATGGCGGCACTGGGCGGTTAACACCGAC ACAACCACCGCCGTGGCCAGCGGTGGAGTCCAAACAGGTGGTTATGAAGAAGGAAATTTGGTTCGACCCAAGTGGACTGG AGAGACCCCCCTGTCTCGTTTGGTTCGAGCTCTTATCTCCTTCAAGCCCTTATACTCTTTCCTCAAGCTCGGTGCTAGGC AGGTTCTGATAAGGTTCATCATTTCCTCTCCCATTTTCGATTCTTCAGTTAGTTGGTGTTAGTTTTTTTTCCTGTTAAAT GGTTACTCTGCAGTTTATTCATTGCTGCATGTTTAGTGTTTGAGTTTATGTTTATGTAAAATTTTGTTTGTGGAGTAGAA GCATTTGTATATTGGTCTATGATGAATGACATGTCCTAAAAGCTTAAGCAATCGGGTAAATGACACATGAATGATTTGAT ATTATATTTCTGACATGCCTCTTCACACAAGAGCGTCTTGGGCTTGAAATGTGGGCAATGCATAGGTCCACCTGCCATGT GATGAAATTGAATTTTTTATGTGAATAACGAGGGCAATAAGGATTGAACTCTAGATCAATTAGTCATATAGACTCTAATA CGAATCATGAATCAATTCTCCCAAAAAATTAAGCAGGTAAAGGACACATGAATGATTTTTTATTATATTTCTAACATGAG ATACTTTTTCTCCTTTTTCTCTTTGAAGATGTGTTGTGTTGGTTTTTTGGCATATCATGTTGGCTATGCTTCTAGTTTGA TGCAGGTACCTCATGTAGTGGGGGAAAGACTTTTCCTGTTGTGTTATGTTAGGTTGGACTTTCATTATAGCCATGTGCTA ATGAATGGTGAAATGAAGTTGTGCTAAGTGTGTCTTTGTTGGAAAGTGAATGTGATTTTTTTGGATATATGTGAATGCAC AGTACAGCTGAGAAGAACAACATACCTTGGAGGGAAATGACCAAAGAGATTTTAGAGTCCGAAGTGTACAGGGAGTTGGA CAGCATTCAAAACCGCTCTTTAGTATATCCGGATTGTAAGTTTATATGAATTTTTGGTTTTTAGTGCTTACCTTCTACTT ATTTTGTCTTTACTAATGTGTGTTCAAGTATATTGATGGAGGGGATACTTTATTCACTGTGCAGATTATTTGAATCCATT CCATGCGTATGATGAGGGCAATCTTACATGGTTGGTAAGTGGTAATTCTGAACTTTCCCATAGGCCGATGGATGCTTTAA TTTGGTCACTCCTATCTTGATAATATATAATCATACAACTTATAGCATGTTTGTTTAGGTAGGTAAACTGGTTGTGGTTG TTACTGCAGACTTTTTTTGGTCTTATGCACATACCGTCCCTGGAGTTTTTTTAATACTTCCATAAATTTTAATATATTAG TACTCAAATGAAACTTTGATGATGTTTTTCTGCCATTGGAATATAGACAAGGCAACAACATCGGAAAATTTCTGATTCTA TTTATAGGTAGGTGAGTTGTGCTAAAAGTTGCACCTTATAGTTGTAAATATGTGACTATGCCTTCTGACCTTGCATCTAT CCAAGATAAGGGTGGTAACAAACATAACTGACAAATGTTTGTTGACCCACATTTTTCTCTTTTATGGGACCTTCTTCATC TTTCTAAAATGCTTTGGGTAAAGCATTTGTTCATTTTGTGCGCCTATCAAACTTACTGATTGTTCTCACAAAGGTTACAG AGTACAGTGATAGGCTAAGTGGGGGGGGGGGGGGGAGAAACCTTAGTCACTGTTACAATGACCCTATGTGGTGACAGGTG AACATGCCTCTCTTCGTCTTCTTGGTCTCTTTTATCTTCTCTGTTGGACTCTTCCTACTTCGGCCCAATTACTTCCTTGG TTTTGTCACTTAGTGTTATTGACTTCTTGTCTCTTTCCTCGTTTCAGTGAGTCAGCCGCCAGGCAACGCGTCCTCCTGCG TGTTTCTTTCCTACGTACTATTATTCCCTTTGTCCTGCGAATCTCTGTTCCATGCCATTCCTGATTTCTATGCTTTAGGG ATCTGTTTCTTCTTTATTGTCTCTCGTGGTCCCTGCAATTGTAATCAAAAGGGAGAACATGGATGGGAGAAGAGATAAGA AGGGTGCTTAGCCCTTGATGGGTCTTCCGAGCGTGTATACGCTCGGGTCGGACTCAGGATACCCTGGTTTGGAAGGTATA AGTCCTGGTTGGACTCGGGGTACCCTGGTTGAGGGTAGGTTTCTTAATCCGACCAGATGAGAGGGTATCACATTAGTATC TGTTTTTGCATTCTATTGACAATTTTATGAGATTTTCCCATGTTGGTTCTTCTTCATTTGTTCTTTAGCTATCATTTTAA TTTTAGGTTTCTTATTGACTAGCCCTTCAGTTTTAGAGACTATTTTGTGGGTGGATTCCTATTAGTAATTACTGTTAGTG CCTTGGTAAAATTTCAATAAACTTGTTATAAAATCTGTGCTCTATGATGATAGGCAGCGGCAGAAGCTGAGGCTGCTACA ATGTCAATGGTGAAAAGAACAATTCCTGATGCTTCTTCGGTAGATGAAGCAAATCAGGTACTGCGTGGAAATTGGCTTCG TGCAATTGAACAACACCACATGCAGTATTCACAAACATCCATGATTGATGACATTCTAGATATTGGATGCTCTGTTGGTG TAAGCTCAAGATATCTCGCAGACAAATTCCCTACAGCCAAAGTCACCGTGAGTGAGTTAATGGATGAAATTGTTCTCAAC ACGATGTAATGATGGAGATTGAAGAATCATCATAACATAAATTCATTCTTGATCAACTTAAAATAACCAAGAACAAAAGA AGCCTTATGCTTGGTATTGATGTGCATTGTGATTGATATGTTTGTTCCAGGGGCTAGATCTGTCACCCTATTTTCTAGCT GTGGCTCAGCATAAGGAAAAGAATGGAAATCCTAGAAAGTTTCCAATTAAATGGATACATGCAAAGGGAGAAGACACAGG CTTGCCTTCTAAATCATTTGACATTGTATCAATTGCTTATGTGGTATGTCCTTTTCTTTTCCCTATTTTGTCCTCCTTTA AAATTTCAGAGAATGTGCTTTTTCTATATACATTTTATCTTAATATGGTCATTAAAAAGTGAGAATAAGTCCTGTTACGG ACATTATTGCTTGATTTTTTATATGATGACTGCAATACAAGGCCTTAAGGTTTATGGATTTTGAATATTCATATAATTGA ATTGAAGCACTGAACTCTCTAGAGTTTTCAGTGTTTTTGCATTAAATCAATTGTCGATTTCCAATTTAATATCACAATAT AACAGAGTAATCTTTTCATAGTGAACATGTTTTTTTGTTTTGATCGGCAAATTTTTTTTCTGCACCTGCTCCTACATGTC CATCAGCTTTTACCACTTGAAAACTGGGTTAAATATGTTCAGATTCTCAAGTGGTGGAGTCTTTCTAAGATGTTTTGGAT TTATCACTGTATTACAAGGAAAGGTGTCATGAAATTAAAGTAACAAACTCTAGGTGCTTTTCCTGCAGCTCAGTGATGAC CTCTTCTGAATGTTGATCCCATGTCAAATAATATATCATAGATAGATTGCTCTAACACTAATTTTGATAAGATATTTAGT GGATTTCAATGTCTTAATTCTCTAAATTTATGCAGCTGCATGAATGTCCTACGAGAGCTATAGTGAATTTAGTAAGGGAA GCATTCCGCCTGCTTCGGCCTGGAGGGACGCTAGCTATGACAGATAATTCGGTATATAATATCATGAGTTTTTTTTGGGT TTTATGCTCCTATGAGAAACACTAAATACTATTATTTTTTACTTCTGCAGCCGAAGTCGAAGGTCCTACAGGTACTTTCC AGCTTTTCTGTTTGATCTTATTTATTAATCAATACATAAAGTTTTACATATCTTTTTCTTTTATTGTGTTAAACCTTTGT GTATTAACCAGTGTAAAGATGCATAAATGAACTCAAGTACTATAGCTAAAGTGGCACTAGTTCCCTTTGGTAACTGCTTG ATCTTTGTAGCAAATCCTAGGTTACAGGACCAAAATTTGGGTTGAGGATGGTCCACCATATATAGATACTCTTTAAAATT CTCACCACCCATGGCAAATCATTAAGTTGATATTTGAGGAACTTACTACTTATTTCTAATATGTTCTCAGTTCTTACTGA GCTTCCATTTATTGTTAAGTTGAAATCTCACTAGAGAACAATATAAAGTTGAAATTTTGTGCTGACAATTTGGAGTGCTC CATAACATCAATATGGATCATCTTTCATTATTTTGTAGTTTGTACCAGAAGCATAGTTGTCATCATTTTGAACATTACTT AGCCAGGAACATAACTCGTAATAATGCTTATGCTTTTCACTTTGATTATGATGGTAGATCTGAATCTGATAGAATGGCTT TCCATGTTGTCCATGTAGGAACATCATCAAACTTCTGTTTTTTCTGTGTGTCGTAGGAATTGTCTCCAGTTCTGTTTACA TTGATGAAGAGCACAGAACCCTTTCTTGATGAGTACTACTTGACTGACATGGATGGAACACTGAGAGAAGCTGGTTTTGT GAACATAACATCAATTCTTACTGACCCCAGGCACGTGACTATAACGGCAACTGTGCCTATATGAAATATCTTGAATTTTC CTTTTCTTTTTTGGTGCATAAACGTCTTCTTGATTTTGGCTTCAAGCACGTTTGCCCTTGTGCAATTATTGTGTTGTGTC CTATTCTAGATAGTTACAGTGTCTAAAACTGGTAGATGTACCGTGTACGTTCAGTTGAAGAATGTGGTCCAAAATTATTA GAATTATTTATCCATGGATCATTCTGAAATGTTCTTTCAAGCTGATCAAAACATTTGTAATTCATCAGATGTAGTATTAT GGTTTTTTCTTAACTATTTTTTTGTTTACTTTTCCCTCATTTTTGGGTGTGTAGTATTATGTTCTTATAGCTGCCAAATG TGAAACATGTATGATGTATAAAGTTTCAATCCTTCAAGAATTTGAAGAAGTGGATGTTATGTTTAGATATCCGTTAAAAC CAATGTAAATAAACTATACATTCAGGATAAAAGATGAAC
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0247600.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTCACTGTGGTCTGTCCCTTCCACACCACACACACAACACAGAATGTCTCTGTCGTCCCCACTTCAGAACCTCCCTGC GATAATCTCCACGAACGGTAACGCCACCGCAACGGCGAGGGCAGCGAAATGGCGGCACTGGGCGGTTAACACCGACACAA CCACCGCCGTGGCCAGCGGTGGAGTCCAAACAGGTGGTTATGAAGAAGGAAATTTGGTTCGACCCAAGTGGACTGGAGAG ACCCCCCTGTCTCGTTTGGTTCGAGCTCTTATCTCCTTCAAGCCCTTATACTCTTTCCTCAAGCTCGGTGCTAGGCAGGT TCTGATAAGTACAGCTGAGAAGAACAACATACCTTGGAGGGAAATGACCAAAGAGATTTTAGAGTCCGAAGTGTACAGGG AGTTGGACAGCATTCAAAACCGCTCTTTAGTATATCCGGATTATTATTTGAATCCATTCCATGCGTATGATGAGGGCAAT CTTACATGGTTGGCAGCGGCAGAAGCTGAGGCTGCTACAATGTCAATGGTGAAAAGAACAATTCCTGATGCTTCTTCGGT AGATGAAGCAAATCAGGTACTGCGTGGAAATTGGCTTCGTGCAATTGAACAACACCACATGCAGTATTCACAAACATCCA TGATTGATGACATTCTAGATATTGGATGCTCTGTTGGTGTAAGCTCAAGATATCTCGCAGACAAATTCCCTACAGCCAAA GTCACCGGGCTAGATCTGTCACCCTATTTTCTAGCTGTGGCTCAGCATAAGGAAAAGAATGGAAATCCTAGAAAGTTTCC AATTAAATGGATACATGCAAAGGGAGAAGACACAGGCTTGCCTTCTAAATCATTTGACATTGTATCAATTGCTTATGTGC TGCATGAATGTCCTACGAGAGCTATAGTGAATTTAGTAAGGGAAGCATTCCGCCTGCTTCGGCCTGGAGGGACGCTAGCT ATGACAGATAATTCGCCGAAGTCGAAGGTCCTACAGGAATTGTCTCCAGTTCTGTTTACATTGATGAAGAGCACAGAACC CTTTCTTGATGAGTACTACTTGACTGACATGGATGGAACACTGAGAGAAGCTGGTTTTGTGAACATAACATCAATTCTTA CTGACCCCAGGCACGTGACTATAACGGCAACTGTGCCTATATGA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0247600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MSLWSVPSTPHTQHRMSLSSPLQNLPAIISTNGNATATARAAKWRHWAVNTDTTTAVASGGVQTGGYEEGNLVRPKWTGE TPLSRLVRALISFKPLYSFLKLGARQVLISTAEKNNIPWREMTKEILESEVYRELDSIQNRSLVYPDYYLNPFHAYDEGN LTWLAAAEAEAATMSMVKRTIPDASSVDEANQVLRGNWLRAIEQHHMQYSQTSMIDDILDIGCSVGVSSRYLADKFPTAK VTGLDLSPYFLAVAQHKEKNGNPRKFPIKWIHAKGEDTGLPSKSFDIVSIAYVLHECPTRAIVNLVREAFRLLRPGGTLA MTDNSPKSKVLQELSPVLFTLMKSTEPFLDEYYLTDMDGTLREAGFVNITSILTDPRHVTITATVPI
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR42912
165 386 222 5.3E-70 –
PANTHER
PTHR42912:SF22
165 386 222 5.3E-70 –
SUPERFAMILY
SSF53335
189 377 189 7.37E-31
IPR029063
Gene3D
G3DSA:3.40.50.150
209 383 175 5.0E-31 –
CDD
cd02440
217 322 106 5.84439E-14 –
Pfam
PF08241
219 320 102 3.8E-20
IPR013216

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008168
Molecular function Methyltransferase activity Catalysis of the transfer of a methyl group to an acceptor molecule.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0247600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…