Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi3g1v0247600.2

Overview

Field Value
Gene ID LotjaGi3g1v0247600
Transcript ID LotjaGi3g1v0247600.2
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Methyltransferase; TAIR: AT1G23360.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|P67056|MENG_LISIN Demethylmenaquinone methyltransferase; TrEMBL-Plants: tr|I1LSB3|I1LSB3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0247600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:40842429..40847513) extracted from Lotus japonicus Gifu genome v1.2.

CTGTCCCTTCCACACCACACACACAACACAGAATGTCTCTGTCGTCCCCACTTCAGAACCTCCCTGCGATAATCTCCACG AACGGTAACGCCACCGCAACGGCGAGGGCAGCGAAATGGCGGCACTGGGCGGTTAACACCGACACAACCACCGCCGTGGC CAGCGGTGGAGTCCAAACAGGTGGTTATGAAGAAGGAAATTTGGTTCGACCCAAGTGGACTGGAGAGACCCCCCTGTCTC GTTTGGTTCGAGCTCTTATCTCCTTCAAGCCCTTATACTCTTTCCTCAAGCTCGGTGCTAGGCAGGTTCTGATAAGGTTC ATCATTTCCTCTCCCATTTTCGATTCTTCAGTTAGTTGGTGTTAGTTTTTTTTCCTGTTAAATGGTTACTCTGCAGTTTA TTCATTGCTGCATGTTTAGTGTTTGAGTTTATGTTTATGTAAAATTTTGTTTGTGGAGTAGAAGCATTTGTATATTGGTC TATGATGAATGACATGTCCTAAAAGCTTAAGCAATCGGGTAAATGACACATGAATGATTTGATATTATATTTCTGACATG CCTCTTCACACAAGAGCGTCTTGGGCTTGAAATGTGGGCAATGCATAGGTCCACCTGCCATGTGATGAAATTGAATTTTT TATGTGAATAACGAGGGCAATAAGGATTGAACTCTAGATCAATTAGTCATATAGACTCTAATACGAATCATGAATCAATT CTCCCAAAAAATTAAGCAGGTAAAGGACACATGAATGATTTTTTATTATATTTCTAACATGAGATACTTTTTCTCCTTTT TCTCTTTGAAGATGTGTTGTGTTGGTTTTTTGGCATATCATGTTGGCTATGCTTCTAGTTTGATGCAGGTACCTCATGTA GTGGGGGAAAGACTTTTCCTGTTGTGTTATGTTAGGTTGGACTTTCATTATAGCCATGTGCTAATGAATGGTGAAATGAA GTTGTGCTAAGTGTGTCTTTGTTGGAAAGTGAATGTGATTTTTTTGGATATATGTGAATGCACAGTACAGCTGAGAAGAA CAACATACCTTGGAGGGAAATGACCAAAGAGATTTTAGAGTCCGAAGTGTACAGGGAGTTGGACAGCATTCAAAACCGCT CTTTAGTATATCCGGATTGTAAGTTTATATGAATTTTTGGTTTTTAGTGCTTACCTTCTACTTATTTTGTCTTTACTAAT GTGTGTTCAAGTATATTGATGGAGGGGATACTTTATTCACTGTGCAGATTATTTGAATCCATTCCATGCGTATGATGAGG GCAATCTTACATGGTTGGTAAGTGGTAATTCTGAACTTTCCCATAGGCCGATGGATGCTTTAATTTGGTCACTCCTATCT TGATAATATATAATCATACAACTTATAGCATGTTTGTTTAGGTAGGTAAACTGGTTGTGGTTGTTACTGCAGACTTTTTT TGGTCTTATGCACATACCGTCCCTGGAGTTTTTTTAATACTTCCATAAATTTTAATATATTAGTACTCAAATGAAACTTT GATGATGTTTTTCTGCCATTGGAATATAGACAAGGCAACAACATCGGAAAATTTCTGATTCTATTTATAGGTAGGTGAGT TGTGCTAAAAGTTGCACCTTATAGTTGTAAATATGTGACTATGCCTTCTGACCTTGCATCTATCCAAGATAAGGGTGGTA ACAAACATAACTGACAAATGTTTGTTGACCCACATTTTTCTCTTTTATGGGACCTTCTTCATCTTTCTAAAATGCTTTGG GTAAAGCATTTGTTCATTTTGTGCGCCTATCAAACTTACTGATTGTTCTCACAAAGGTTACAGAGTACAGTGATAGGCTA AGTGGGGGGGGGGGGGGGAGAAACCTTAGTCACTGTTACAATGACCCTATGTGGTGACAGGTGAACATGCCTCTCTTCGT CTTCTTGGTCTCTTTTATCTTCTCTGTTGGACTCTTCCTACTTCGGCCCAATTACTTCCTTGGTTTTGTCACTTAGTGTT ATTGACTTCTTGTCTCTTTCCTCGTTTCAGTGAGTCAGCCGCCAGGCAACGCGTCCTCCTGCGTGTTTCTTTCCTACGTA CTATTATTCCCTTTGTCCTGCGAATCTCTGTTCCATGCCATTCCTGATTTCTATGCTTTAGGGATCTGTTTCTTCTTTAT TGTCTCTCGTGGTCCCTGCAATTGTAATCAAAAGGGAGAACATGGATGGGAGAAGAGATAAGAAGGGTGCTTAGCCCTTG ATGGGTCTTCCGAGCGTGTATACGCTCGGGTCGGACTCAGGATACCCTGGTTTGGAAGGTATAAGTCCTGGTTGGACTCG GGGTACCCTGGTTGAGGGTAGGTTTCTTAATCCGACCAGATGAGAGGGTATCACATTAGTATCTGTTTTTGCATTCTATT GACAATTTTATGAGATTTTCCCATGTTGGTTCTTCTTCATTTGTTCTTTAGCTATCATTTTAATTTTAGGTTTCTTATTG ACTAGCCCTTCAGTTTTAGAGACTATTTTGTGGGTGGATTCCTATTAGTAATTACTGTTAGTGCCTTGGTAAAATTTCAA TAAACTTGTTATAAAATCTGTGCTCTATGATGATAGGCAGCGGCAGAAGCTGAGGCTGCTACAATGTCAATGGTGAAAAG AACAATTCCTGATGCTTCTTCGGTAGATGAAGCAAATCAGGTACTGCGTGGAAATTGGCTTCGTGCAATTGAACAACACC ACATGCAGTATTCACAAACATCCATGATTGATGACATTCTAGATATTGGATGCTCTGTTGGTGTAAGCTCAAGATATCTC GCAGACAAATTCCCTACAGCCAAAGTCACCGTGAGTGAGTTAATGGATGAAATTGTTCTCAACACGATGTAATGATGGAG ATTGAAGAATCATCATAACATAAATTCATTCTTGATCAACTTAAAATAACCAAGAACAAAAGAAGCCTTATGCTTGGTAT TGATGTGCATTGTGATTGATATGTTTGTTCCAGGGGCTAGATCTGTCACCCTATTTTCTAGCTGTGGCTCAGCATAAGGA AAAGAATGGAAATCCTAGAAAGTTTCCAATTAAATGGATACATGCAAAGGGAGAAGACACAGGCTTGCCTTCTAAATCAT TTGACATTGTATCAATTGCTTATGTGGTATGTCCTTTTCTTTTCCCTATTTTGTCCTCCTTTAAAATTTCAGAGAATGTG CTTTTTCTATATACATTTTATCTTAATATGGTCATTAAAAAGTGAGAATAAGTCCTGTTACGGACATTATTGCTTGATTT TTTATATGATGACTGCAATACAAGGCCTTAAGGTTTATGGATTTTGAATATTCATATAATTGAATTGAAGCACTGAACTC TCTAGAGTTTTCAGTGTTTTTGCATTAAATCAATTGTCGATTTCCAATTTAATATCACAATATAACAGAGTAATCTTTTC ATAGTGAACATGTTTTTTTGTTTTGATCGGCAAATTTTTTTTCTGCACCTGCTCCTACATGTCCATCAGCTTTTACCACT TGAAAACTGGGTTAAATATGTTCAGATTCTCAAGTGGTGGAGTCTTTCTAAGATGTTTTGGATTTATCACTGTATTACAA GGAAAGGTGTCATGAAATTAAAGTAACAAACTCTAGGTGCTTTTCCTGCAGCTCAGTGATGACCTCTTCTGAATGTTGAT CCCATGTCAAATAATATATCATAGATAGATTGCTCTAACACTAATTTTGATAAGATATTTAGTGGATTTCAATGTCTTAA TTCTCTAAATTTATGCAGCTGCATGAATGTCCTACGAGAGCTATAGTGAATTTAGTAAGGGAAGCATTCCGCCTGCTTCG GCCTGGAGGGACGCTAGCTATGACAGATAATTCGGTATATAATATCATGAGTTTTTTTTGGGTTTTATGCTCCTATGAGA AACACTAAATACTATTATTTTTTACTTCTGCAGCCGAAGTCGAAGGTCCTACAGGTACTTTCCAGCTTTTCTGTTTGATC TTATTTATTAATCAATACATAAAGTTTTACATATCTTTTTCTTTTATTGTGTTAAACCTTTGTGTATTAACCAGTGTAAA GATGCATAAATGAACTCAAGTACTATAGCTAAAGTGGCACTAGTTCCCTTTGGTAACTGCTTGATCTTTGTAGCAAATCC TAGGTTACAGGACCAAAATTTGGGTTGAGGATGGTCCACCATATATAGATACTCTTTAAAATTCTCACCACCCATGGCAA ATCATTAAGTTGATATTTGAGGAACTTACTACTTATTTCTAATATGTTCTCAGTTCTTACTGAGCTTCCATTTATTGTTA AGTTGAAATCTCACTAGAGAACAATATAAAGTTGAAATTTTGTGCTGACAATTTGGAGTGCTCCATAACATCAATATGGA TCATCTTTCATTATTTTGTAGTTTGTACCAGAAGCATAGTTGTCATCATTTTGAACATTACTTAGCCAGGAACATAACTC GTAATAATGCTTATGCTTTTCACTTTGATTATGATGGTAGATCTGAATCTGATAGAATGGCTTTCCATGTTGTCCATGTA GGAACATCATCAAACTTCTGTTTTTTCTGTGTGTCGTAGGAATTGTCTCCAGTTCTGTTTACATTGATGAAGAGCACAGA ACCCTTTCTTGATGAGTACTACTTGACTGACATGGATGGAACACTGAGAGAAGCTGGTTTTGTGAACATAACATCAATTC TTACTGACCCCAGGCACGTGACTATAACGGCAACTGTGCCTATATGAAATATCTTGAATTTTCCTTTTCTTTTTTGGTGC ATAAACGTCTTCTTGATTTTGGCTTCAAGCACGTTTGCCCTTGTGCAATTATTGTGTTGTGTCCTATTCTAGATAGTTAC AGTGTCTAAAACTGGTAGATGTACCGTGTACGTTCAGTTGAAGAATGTGGTCCAAAATTATTAGAATTATTTATCCATGG ATCATTCTGAAATGTTCTTTCAAGCTGATCAAAACATTTGTAATTCATCAGATGTAGTATTATGGTTTTTTCTTAACTAT TTTTTTGTTTACTTTTCCCTCATTTTTGGGTGTGTAGTATTATGT
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0247600.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTCTCTGTCGTCCCCACTTCAGAACCTCCCTGCGATAATCTCCACGAACGGTAACGCCACCGCAACGGCGAGGGCAGC GAAATGGCGGCACTGGGCGGTTAACACCGACACAACCACCGCCGTGGCCAGCGGTGGAGTCCAAACAGGTGGTTATGAAG AAGGAAATTTGGTTCGACCCAAGTGGACTGGAGAGACCCCCCTGTCTCGTTTGGTTCGAGCTCTTATCTCCTTCAAGCCC TTATACTCTTTCCTCAAGCTCGGTGCTAGGCAGGTTCTGATAAGTACAGCTGAGAAGAACAACATACCTTGGAGGGAAAT GACCAAAGAGATTTTAGAGTCCGAAGTGTACAGGGAGTTGGACAGCATTCAAAACCGCTCTTTAGTATATCCGGATTATT ATTTGAATCCATTCCATGCGTATGATGAGGGCAATCTTACATGGTTGGCAGCGGCAGAAGCTGAGGCTGCTACAATGTCA ATGGTGAAAAGAACAATTCCTGATGCTTCTTCGGTAGATGAAGCAAATCAGGTACTGCGTGGAAATTGGCTTCGTGCAAT TGAACAACACCACATGCAGTATTCACAAACATCCATGATTGATGACATTCTAGATATTGGATGCTCTGTTGGTGTAAGCT CAAGATATCTCGCAGACAAATTCCCTACAGCCAAAGTCACCGGGCTAGATCTGTCACCCTATTTTCTAGCTGTGGCTCAG CATAAGGAAAAGAATGGAAATCCTAGAAAGTTTCCAATTAAATGGATACATGCAAAGGGAGAAGACACAGGCTTGCCTTC TAAATCATTTGACATTGTATCAATTGCTTATGTGCTGCATGAATGTCCTACGAGAGCTATAGTGAATTTAGTAAGGGAAG CATTCCGCCTGCTTCGGCCTGGAGGGACGCTAGCTATGACAGATAATTCGCCGAAGTCGAAGGTCCTACAGGAACATCAT CAAACTTCTGTTTTTTCTGTGTGTCGTAGGAATTGTCTCCAGTTCTGTTTACATTGA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0247600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MSLSSPLQNLPAIISTNGNATATARAAKWRHWAVNTDTTTAVASGGVQTGGYEEGNLVRPKWTGETPLSRLVRALISFKP LYSFLKLGARQVLISTAEKNNIPWREMTKEILESEVYRELDSIQNRSLVYPDYYLNPFHAYDEGNLTWLAAAEAEAATMS MVKRTIPDASSVDEANQVLRGNWLRAIEQHHMQYSQTSMIDDILDIGCSVGVSSRYLADKFPTAKVTGLDLSPYFLAVAQ HKEKNGNPRKFPIKWIHAKGEDTGLPSKSFDIVSIAYVLHECPTRAIVNLVREAFRLLRPGGTLAMTDNSPKSKVLQEHH QTSVFSVCRRNCLQFCLH
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR42912
150 323 174 1.0E-58 –
PANTHER
PTHR42912:SF22
150 323 174 1.0E-58 –
SUPERFAMILY
SSF53335
169 313 145 3.53E-27
IPR029063
Gene3D
G3DSA:3.40.50.150
174 331 158 5.6E-28 –
CDD
cd02440
202 307 106 4.50581E-14 –
Pfam
PF08241
204 305 102 2.9E-20
IPR013216

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008168
Molecular function Methyltransferase activity Catalysis of the transfer of a methyl group to an acceptor molecule.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0247600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…