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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0247600 |
| Transcript ID | LotjaGi3g1v0247600.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Methyltransferase; TAIR: AT1G23360.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|P67056|MENG_LISIN Demethylmenaquinone methyltransferase; TrEMBL-Plants: tr|I1LSB3|I1LSB3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0247600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:40842747..40846644) extracted from Lotus japonicus Gifu genome v1.2.
TACCTCATGTAGTGGGGGAAAGACTTTTCCTGTTGTGTTATGTTAGGTTGGACTTTCATTATAGCCATGTGCTAATGAAT GGTGAAATGAAGTTGTGCTAAGTGTGTCTTTGTTGGAAAGTGAATGTGATTTTTTTGGATATATGTGAATGCACAGTACA GCTGAGAAGAACAACATACCTTGGAGGGAAATGACCAAAGAGATTTTAGAGTCCGAAGTGTACAGGGAGTTGGACAGCAT TCAAAACCGCTCTTTAGTATATCCGGATTGTAAGTTTATATGAATTTTTGGTTTTTAGTGCTTACCTTCTACTTATTTTG TCTTTACTAATGTGTGTTCAAGTATATTGATGGAGGGGATACTTTATTCACTGTGCAGATTATTTGAATCCATTCCATGC GTATGATGAGGGCAATCTTACATGGTTGGTAAGTGGTAATTCTGAACTTTCCCATAGGCCGATGGATGCTTTAATTTGGT CACTCCTATCTTGATAATATATAATCATACAACTTATAGCATGTTTGTTTAGGTAGGTAAACTGGTTGTGGTTGTTACTG CAGACTTTTTTTGGTCTTATGCACATACCGTCCCTGGAGTTTTTTTAATACTTCCATAAATTTTAATATATTAGTACTCA AATGAAACTTTGATGATGTTTTTCTGCCATTGGAATATAGACAAGGCAACAACATCGGAAAATTTCTGATTCTATTTATA GGTAGGTGAGTTGTGCTAAAAGTTGCACCTTATAGTTGTAAATATGTGACTATGCCTTCTGACCTTGCATCTATCCAAGA TAAGGGTGGTAACAAACATAACTGACAAATGTTTGTTGACCCACATTTTTCTCTTTTATGGGACCTTCTTCATCTTTCTA AAATGCTTTGGGTAAAGCATTTGTTCATTTTGTGCGCCTATCAAACTTACTGATTGTTCTCACAAAGGTTACAGAGTACA GTGATAGGCTAAGTGGGGGGGGGGGGGGGAGAAACCTTAGTCACTGTTACAATGACCCTATGTGGTGACAGGTGAACATG CCTCTCTTCGTCTTCTTGGTCTCTTTTATCTTCTCTGTTGGACTCTTCCTACTTCGGCCCAATTACTTCCTTGGTTTTGT CACTTAGTGTTATTGACTTCTTGTCTCTTTCCTCGTTTCAGTGAGTCAGCCGCCAGGCAACGCGTCCTCCTGCGTGTTTC TTTCCTACGTACTATTATTCCCTTTGTCCTGCGAATCTCTGTTCCATGCCATTCCTGATTTCTATGCTTTAGGGATCTGT TTCTTCTTTATTGTCTCTCGTGGTCCCTGCAATTGTAATCAAAAGGGAGAACATGGATGGGAGAAGAGATAAGAAGGGTG CTTAGCCCTTGATGGGTCTTCCGAGCGTGTATACGCTCGGGTCGGACTCAGGATACCCTGGTTTGGAAGGTATAAGTCCT GGTTGGACTCGGGGTACCCTGGTTGAGGGTAGGTTTCTTAATCCGACCAGATGAGAGGGTATCACATTAGTATCTGTTTT TGCATTCTATTGACAATTTTATGAGATTTTCCCATGTTGGTTCTTCTTCATTTGTTCTTTAGCTATCATTTTAATTTTAG GTTTCTTATTGACTAGCCCTTCAGTTTTAGAGACTATTTTGTGGGTGGATTCCTATTAGTAATTACTGTTAGTGCCTTGG TAAAATTTCAATAAACTTGTTATAAAATCTGTGCTCTATGATGATAGGCAGCGGCAGAAGCTGAGGCTGCTACAATGTCA ATGGTGAAAAGAACAATTCCTGATGCTTCTTCGGTAGATGAAGCAAATCAGGTACTGCGTGGAAATTGGCTTCGTGCAAT TGAACAACACCACATGCAGTATTCACAAACATCCATGATTGATGACATTCTAGATATTGGATGCTCTGTTGGTGTAAGCT CAAGATATCTCGCAGACAAATTCCCTACAGCCAAAGTCACCGTGAGTGAGTTAATGGATGAAATTGTTCTCAACACGATG TAATGATGGAGATTGAAGAATCATCATAACATAAATTCATTCTTGATCAACTTAAAATAACCAAGAACAAAAGAAGCCTT ATGCTTGGTATTGATGTGCATTGTGATTGATATGTTTGTTCCAGGGGCTAGATCTGTCACCCTATTTTCTAGCTGTGGCT CAGCATAAGGAAAAGAATGGAAATCCTAGAAAGTTTCCAATTAAATGGATACATGCAAAGGGAGAAGACACAGGCTTGCC TTCTAAATCATTTGACATTGTATCAATTGCTTATGTGGTATGTCCTTTTCTTTTCCCTATTTTGTCCTCCTTTAAAATTT CAGAGAATGTGCTTTTTCTATATACATTTTATCTTAATATGGTCATTAAAAAGTGAGAATAAGTCCTGTTACGGACATTA TTGCTTGATTTTTTATATGATGACTGCAATACAAGGCCTTAAGGTTTATGGATTTTGAATATTCATATAATTGAATTGAA GCACTGAACTCTCTAGAGTTTTCAGTGTTTTTGCATTAAATCAATTGTCGATTTCCAATTTAATATCACAATATAACAGA GTAATCTTTTCATAGTGAACATGTTTTTTTGTTTTGATCGGCAAATTTTTTTTCTGCACCTGCTCCTACATGTCCATCAG CTTTTACCACTTGAAAACTGGGTTAAATATGTTCAGATTCTCAAGTGGTGGAGTCTTTCTAAGATGTTTTGGATTTATCA CTGTATTACAAGGAAAGGTGTCATGAAATTAAAGTAACAAACTCTAGGTGCTTTTCCTGCAGCTCAGTGATGACCTCTTC TGAATGTTGATCCCATGTCAAATAATATATCATAGATAGATTGCTCTAACACTAATTTTGATAAGATATTTAGTGGATTT CAATGTCTTAATTCTCTAAATTTATGCAGCTGCATGAATGTCCTACGAGAGCTATAGTGAATTTAGTAAGGGAAGCATTC CGCCTGCTTCGGCCTGGAGGGACGCTAGCTATGACAGATAATTCGGTATATAATATCATGAGTTTTTTTTGGGTTTTATG CTCCTATGAGAAACACTAAATACTATTATTTTTTACTTCTGCAGCCGAAGTCGAAGGTCCTACAGGTACTTTCCAGCTTT TCTGTTTGATCTTATTTATTAATCAATACATAAAGTTTTACATATCTTTTTCTTTTATTGTGTTAAACCTTTGTGTATTA ACCAGTGTAAAGATGCATAAATGAACTCAAGTACTATAGCTAAAGTGGCACTAGTTCCCTTTGGTAACTGCTTGATCTTT GTAGCAAATCCTAGGTTACAGGACCAAAATTTGGGTTGAGGATGGTCCACCATATATAGATACTCTTTAAAATTCTCACC ACCCATGGCAAATCATTAAGTTGATATTTGAGGAACTTACTACTTATTTCTAATATGTTCTCAGTTCTTACTGAGCTTCC ATTTATTGTTAAGTTGAAATCTCACTAGAGAACAATATAAAGTTGAAATTTTGTGCTGACAATTTGGAGTGCTCCATAAC ATCAATATGGATCATCTTTCATTATTTTGTAGTTTGTACCAGAAGCATAGTTGTCATCATTTTGAACATTACTTAGCCAG GAACATAACTCGTAATAATGCTTATGCTTTTCACTTTGATTATGATGGTAGATCTGAATCTGATAGAATGGCTTTCCATG TTGTCCATGTAGGAACATCATCAAACTTCTGTTTTTTCTGTGTGTCGTAGGAATTGTCTCCAGTTCTGTTTACATTGATG AAGAGCACAGAACCCTTTCTTGATGAGTACTACTTGACTGACATGGATGGAACACTGAGAGAAGCTGGTTTTGTGAACAT AACATCAATTCTTACTGACCCCAGGCACGTGACTATAACGGCAACTGTGCCTATATGA
CDS sequence (LotjaGi3g1v0247600.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACCAAAGAGATTTTAGAGTCCGAAGTGTACAGGGAGTTGGACAGCATTCAAAACCGCTCTTTAGTATATCCGGATTA TTATTTGAATCCATTCCATGCGTATGATGAGGGCAATCTTACATGGTTGGCAGCGGCAGAAGCTGAGGCTGCTACAATGT CAATGGTGAAAAGAACAATTCCTGATGCTTCTTCGGTAGATGAAGCAAATCAGGTACTGCGTGGAAATTGGCTTCGTGCA ATTGAACAACACCACATGCAGTATTCACAAACATCCATGATTGATGACATTCTAGATATTGGATGCTCTGTTGGTGTAAG CTCAAGATATCTCGCAGACAAATTCCCTACAGCCAAAGTCACCGGGCTAGATCTGTCACCCTATTTTCTAGCTGTGGCTC AGCATAAGGAAAAGAATGGAAATCCTAGAAAGTTTCCAATTAAATGGATACATGCAAAGGGAGAAGACACAGGCTTGCCT TCTAAATCATTTGACATTGTATCAATTGCTTATGTGCTGCATGAATGTCCTACGAGAGCTATAGTGAATTTAGTAAGGGA AGCATTCCGCCTGCTTCGGCCTGGAGGGACGCTAGCTATGACAGATAATTCGCCGAAGTCGAAGGTCCTACAGGAATTGT CTCCAGTTCTGTTTACATTGATGAAGAGCACAGAACCCTTTCTTGATGAGTACTACTTGACTGACATGGATGGAACACTG AGAGAAGCTGGTTTTGTGAACATAACATCAATTCTTACTGACCCCAGGCACGTGACTATAACGGCAACTGTGCCTATATG A
Protein sequence (LotjaGi3g1v0247600.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTKEILESEVYRELDSIQNRSLVYPDYYLNPFHAYDEGNLTWLAAAEAEAATMSMVKRTIPDASSVDEANQVLRGNWLRA IEQHHMQYSQTSMIDDILDIGCSVGVSSRYLADKFPTAKVTGLDLSPYFLAVAQHKEKNGNPRKFPIKWIHAKGEDTGLP SKSFDIVSIAYVLHECPTRAIVNLVREAFRLLRPGGTLAMTDNSPKSKVLQELSPVLFTLMKSTEPFLDEYYLTDMDGTL REAGFVNITSILTDPRHVTITATVPI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 44 | 265 | 222 | 3.1E-70 | – | |
| PANTHER | 44 | 265 | 222 | 3.1E-70 | – | |
| SUPERFAMILY | 68 | 256 | 189 | 2.3E-31 | ||
| Gene3D | 84 | 262 | 179 | 1.8E-31 | – | |
| CDD | 96 | 201 | 106 | 2.27729E-14 | – | |
| Pfam | 98 | 199 | 102 | 1.8E-20 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. |
Expression pattern of LotjaGi3g1v0247600.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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