Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0251000 |
| Transcript ID | LotjaGi3g1v0251000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Trihelix transcription factor; TAIR: AT3G58630.1 sequence-specific DNA binding transcription factor; Swiss-Prot: sp|Q9LJG8|ASIL2_ARATH Trihelix transcription factor ASIL2; TrEMBL-Plants: tr|A0A151RTL3|A0A151RTL3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0251000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:41941493..41945148) extracted from Lotus japonicus Gifu genome v1.2.
ATGCAATTGTTTTCCCGCACGGTAAACGACTATCATCGTACTTCGTTCGTAACATTGCCAAAGCTGCTGCTTCCGCAGAC GGCCCTCCTTGTTTCTCTGACCCACCCAACCGGCCACCGATTTTCTAATTTTTTTTCTATTAAAACCCAAACACACAGCC GTTATGGTCTCCGCCGACGGAGCTCCGTCGCGTCCTCCGCCGTCGTTCCCCAGCCGCGAGGACTGCTGGAGCGAGGACGC CACCTTCACGCTCGTCGATGCCTGGGGCGAACGCTACCTCGAGCTCAACCGCGGCAGCCTCCGCCAGAAGCACTGGCAGG AGGTCGCCGACACCGTCAACGACCGCCACGCCGGCAGTAAGAAATCCCGCCGGACCGACGTGCAGTGCAAGAACCGAATC GACACGCTGAAGAAGAAGTACAAGATCGAGAAGGCTAGGGTTTCCGAATCCGGCGGCGGTTACCGGAGCCTCTGGCCGTT CTTCTCCCGTCTCAACGCCCTCATCGGCGATACTTATCCGGCCAGAAAGGCATCCCCGCCGGCCGCCGTGAAACCGTCGG CGCCGCCGGCGTGGATTGTCTCGCACCCTGTCGGTCCCCGATCCGGGACTCAGAAACGCCCGGCTGCGAAGCCTTCGCCG CCGGTTCTGAGCAGGGAGGAGGACTCGTTGTTCCGCCGGAATTTCTCGGCGTTCGCGGCGGCTGCGGCTGCTGCGGCGGA GGCGGAGAGCGGGGAGTCGGAGGAGTGGAGGTCGAGCAGCGGCGGCAGTGGGAAGAGGGGAAGAGTGGAGAATGATGACA AGGATTTGCAGTTTGGTTACAGAGAGCTTGCTCATGCTATAGTGAGGTTTGGGGATATGTATGAGAGAGTTGAAGAGATG AAACAGAGGCAAATGGTGGAGTTGGAGAAGCAGAGGATGCAGTTTGCTAAGGATTTGGAATATCAGAGGATGCAGCTTTT CATGGAAACACAGGTTCAGCTGCAAAAAATTAAACGCAGCAAACGATCTTCTTCTGGAACTGGTGAGCTTTTTTTTCGTA CAATTTTGTGATACTGTTGTTTAGTTAGTGTTTGTTTGTTGTTAATGATTTTCATCCTTTGATTTTGTGGAAATTGTATG CTTTTGACTCCATAACATGTCTGGCTTATTGTTCTGTATTGTACTATTGTTGTTGTTTGTCTGTGTTTGGATTTTTCTTT TGTTTGGATGCTAATGTTGTATATGTATGATGCGCTTGTGAATCATGGTGATTGTATGCTTGTGGCTAAAGTAGGGAAAT TTGTGTAGTTGTGAGTGATTGTAACTGAAGGGCAATTTTTGTTTTCACTGTGGGTCAGGTTGGAGTTTAAGCTATGATTG TGCTTAGAGGCAATATTTTGATCAGTTGCATATGTCGTCCATGATGGAAAGAAATTTGTTTCATTTGTCTCATTTTCTTT TCAGAAAGCTGTATTTTGGTTCTCAATCATGTTTTCTTCTGAAAGGAAGAATGTAAAGTGGCCCCACTTTTGTGTGATTA ATGCCTCATATACTTGGATCTTTCTAGTAACTACATTGACTTGTGCTTTGTTACTCATTTCTGGCTTGCTTCTTGAATAT TTTTTTCACACTCATTTCTCGAATTATTATTAGTGCTACCTTGAGCTTTGGTTTATCTTCTCTTTTGGCATTTTAAAGTA TAGCAATAGCTACACATTAAGTGCATTCTTTTAAATCTTTTGGAGGGTTGGTTCATTGCAGATTCACAGAATGATGGAAT TCAGTTTAACCTCACAATTTATAGTATATGGTTTTTCTTTAATTATATTTTACTGTTAAAAAGCTAAGACCAGGACTTCT GATATCAAGTTTTGAATTTTGATCCGATTAGTGTTTGGTTATATAAGATATGGCAATATGGTAAAGCCTAGTTCAGTGTG TCTTCTTTGTTGCATATGGTCAACAATTGCTTCAATTCATTGACATTGAGCCATAAGGGGTTTTCTGGTTTGGAAACTGA GCAGAATTTTTATGAGGCTAGTTCTTTATTGTTTCTTGCTTTTGGTCATTCTTTTTCTTTTCTCTCCTTAAACACAAACA TGGTCTTGGACTCTTGGTGTACTAATTTGTGCAACAGCTCATTGAAAGATATATATACCCTAAAACTCCAACTGAAAATA AAAAAGTCCCATGACATGAATTTGAAATGTCATAAAGTACCTCACCTCCACTTAAGTCCACTTAAGTATTGGCCCCGAAA TTCCATTCCAAGAGGAAATGGAATGTCATCACAGTCTCCATTTGTTATTAAAAGTTTGCTGAAATTTTAGACACCTTGAA AGAATCAAGACATATGCAGACAAAGACATAAGTTGAAATCCTGCGTTGTGAAGTATTATATTACTATAATAAAATAATTC AATTAATTTTGACTATGGAGGCTTAGGTTCAGCTTCCTTTTTTTGGTCCAATTTATGTCTGTAGTTGTCAAAGCACCCAC TCTTGCCTTTAATTCCTCTGCCTCAGGCCCTTATTTAAAACACCTGTACTCTGTTGAGTTCTGTTGGAGTAATCTTCATT GCAGTTGATTATTAATTTAACACTTTTTAAATTTGTGTTTAATATATAAATAATCATAAGATTTTTATTCTTAGTGTTAT TGTTACATGTCAAATGAAGTAATTGCACTCTAATTTTGTTAGTGGTATGTTGGTGTTGCTGCCATTAAAAATAAAAATAA GGTAAGGTTACCAAGTTTGTTGTTTGCGGCTTAGTTTTTTGTTTCTCTTTGTTTGTACATGCCTCTCAATCATAAGCACC AAGATTTGTGCGCTCTTGTATGTTTCTGTCGTATTTTCTCATCTTCTGTGGAAATATTTTTTGGTCTCCAAATATAGAAG TTTTCATATAAAAATAATACTCATAATTCAGTTTCCATAGAACACTTAAATATCAAATGTTGTTTTCTTATGTATACTTT GATTATTTTTGAAATCATACTTTCCTTTAAATAACGTTTATGTCAATTCGTACTTGGTAGTATCTTCCAAGGCGTAGTTT CAGTTTTCGTTGACATGTATATGACTTTGATTAATTGTGTCATGATTAATTGTGTCATAAATTGAATAAGACAGATGGCA CCACTATAGTTATTAATTTTTGGAGATTATTTTTTCTTTTAAAAATATTTTATAGATTAAGGTTAAAGAAGGACTTTTTA AGTATATGAGCTGTATGTTTTTAGATAATTTCAATACATGTGTATTCGTATGCTTATATATTTTCTTGTTTCCTCTAACA GATAGTTTCTCATAGCAAGCAGTGATGGATATATGATATATGATATCCTATTGGGAAGAACTGAAGAATAGATAGATTTA CATTTGGACATGGAAAGCACATACCCTTTTTTTTGGAATGAAAGAAAATTTAGGCAAAGGTATTTCACAGTGAGTATTTC GGGTTTGGTTGTTTTTTTAATGTAATACTTGCTTTTGTGTAGTAAATTTTCTTTCTTTTTTCTTTCACCTTTGGACTTTG GTGAACATCCGAAGATAAATGAGGGAAAAGATGATGGCTTAATTCGAACTTTCATTTTGTTAGATTCACCTTATAATGAT GATTTAAATCTTTATTTAATATTTGCCATTTTTTTTACGTTTATGTCTTGTTCCGA
CDS sequence (LotjaGi3g1v0251000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTCTCCGCCGACGGAGCTCCGTCGCGTCCTCCGCCGTCGTTCCCCAGCCGCGAGGACTGCTGGAGCGAGGACGCCAC CTTCACGCTCGTCGATGCCTGGGGCGAACGCTACCTCGAGCTCAACCGCGGCAGCCTCCGCCAGAAGCACTGGCAGGAGG TCGCCGACACCGTCAACGACCGCCACGCCGGCAGTAAGAAATCCCGCCGGACCGACGTGCAGTGCAAGAACCGAATCGAC ACGCTGAAGAAGAAGTACAAGATCGAGAAGGCTAGGGTTTCCGAATCCGGCGGCGGTTACCGGAGCCTCTGGCCGTTCTT CTCCCGTCTCAACGCCCTCATCGGCGATACTTATCCGGCCAGAAAGGCATCCCCGCCGGCCGCCGTGAAACCGTCGGCGC CGCCGGCGTGGATTGTCTCGCACCCTGTCGGTCCCCGATCCGGGACTCAGAAACGCCCGGCTGCGAAGCCTTCGCCGCCG GTTCTGAGCAGGGAGGAGGACTCGTTGTTCCGCCGGAATTTCTCGGCGTTCGCGGCGGCTGCGGCTGCTGCGGCGGAGGC GGAGAGCGGGGAGTCGGAGGAGTGGAGGTCGAGCAGCGGCGGCAGTGGGAAGAGGGGAAGAGTGGAGAATGATGACAAGG ATTTGCAGTTTGGTTACAGAGAGCTTGCTCATGCTATAGTGAGGTTTGGGGATATGTATGAGAGAGTTGAAGAGATGAAA CAGAGGCAAATGGTGGAGTTGGAGAAGCAGAGGATGCAGTTTGCTAAGGATTTGGAATATCAGAGGATGCAGCTTTTCAT GGAAACACAGGTTCAGCTGCAAAAAATTAAACGCAGCAAACGATCTTCTTCTGGAACTGATAGTTTCTCATAG
Protein sequence (LotjaGi3g1v0251000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVSADGAPSRPPPSFPSREDCWSEDATFTLVDAWGERYLELNRGSLRQKHWQEVADTVNDRHAGSKKSRRTDVQCKNRID TLKKKYKIEKARVSESGGGYRSLWPFFSRLNALIGDTYPARKASPPAAVKPSAPPAWIVSHPVGPRSGTQKRPAAKPSPP VLSREEDSLFRRNFSAFAAAAAAAAEAESGESEEWRSSSGGSGKRGRVENDDKDLQFGYRELAHAIVRFGDMYERVEEMK QRQMVELEKQRMQFAKDLEYQRMQLFMETQVQLQKIKRSKRSSSGTDSFS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 20 | 20 | - | – | |
| PANTHER | 6 | 284 | 279 | 2.1E-121 | – | |
| PANTHER | 6 | 284 | 279 | 2.1E-121 | – | |
| Pfam | 19 | 113 | 95 | 5.6E-25 | – | |
| MobiDBLite | 122 | 165 | 44 | - | – | |
| MobiDBLite | 188 | 210 | 23 | - | – | |
| Coils | 233 | 253 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0251000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…