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Field | Value |
---|---|
Gene ID | LotjaGi3g1v0265700 |
Transcript ID | LotjaGi3g1v0265700.1 |
Related isoforms 4 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Beta-glucosidase; TAIR: AT4G21760.2 beta-glucosidase 47; Swiss-Prot: sp|Q7XSK0|BGL18_ORYSJ Beta-glucosidase 18; TrEMBL-Plants: tr|A0A072VAX5|A0A072VAX5_MEDTR Glycoside hydrolase family 1 protein; Found in the gene: LotjaGi3g1v0265700 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:49803468..49808553) extracted from Lotus japonicus Gifu genome v1.2.
ATTCATATCTTTTGGGTAAAGATTGATCCTGAAAAGAAAAAAAAATTGCACTTGAGTCCCAAACTGAAGCCTTCGTTAGC ACTTTTGCATGTCTGTCTAGATTAAATTCCGTTAAAATTAATTAAAAAAATAAAAAATTTAGAAATAAGAAAAACCCAGG TCCTCATCTGCGACACCGGCACGGCGAAACAGAGTGTCTAGATGGTCACAGCGGTGGCAACTTCGGAGGTGACAGAGCAG TCAAGCCCTGGTTTGGCTGAGGCATGGTGGCCCTGGGTTATGGTTGTTTTGTGCGTTTCCAGAGGATGTGAGACAATGGC TCGATAGGAGGTTCAATGGTTCAGGTACGTTGTTCCCGGTGGTGCTTCTTCCATGGCCTTCGATGCTAAAATCACTGTTA ATAGCCATAAATACTAGTGAAAGTTGCTTATAGTTCTATCCATGCCATGGTGACTTTGATTAATCATGGTTTACCAGTTG TATCCAAAGATGTAATCATTTCAAATTCAAATCAATTGGTAGCGATAATACCGAACCTACCTTACTCTATCAATACACAT TATGAAACCTAACTTACCAGAAACCACCAATAGATAATAAATTTTAGTTGCAGTAATCAGGCGCCAGATTACAAATGATT GAAAAATTGAACACCTTACATGGAGGTTTTAAATAAGGAGTGCCAAATTGTATCTGCTTCTCAAGAAACAAAATGACAAT GCAACAGTCGGCACTGCGCGTTGTGTTGTTGACCTTTGTTTGTTGTTTTCATTTTCATGTCCAAAGTTCCCATGATGTTG GAGATGGAATCAGCAGATTTAATTTCCCAAGAGGGTTCCTTTTCGGAGCAAGTACTTCGTCTTACCAGGTAAATTGTTCT TGCAATTGCCAATTATCAATGGTTTATTTCTGTCCTGAAATATGTATACTTTGTTGTTTCTAAATAAAAAAAAGATTGAA GGAGCAGCTTTTGAAGGTGGTAAAGGTTTAAGCAACTGGGATGCTTTTTCCCACATACCAGGTAAGTGGTGACTGGTGAT TTCATATCTTACTCTACCTTGATTGTTTGTTGTGCATACAGTTATAGAATTTCAACATTGTGCATGAGCATGGATAATCA CACTTCAGTTTACTGAATTTTCAGGAAATATAAAACATAATGAAACTGGTGATGTAGCTGATGATCATTATCATCGCTAT TTGGTAATACTAATCTGATATTATGATATATATATATATATATATATATACATATATCAACTTCACATTTTACTTGCCTT AACTAAACGCTAGCTTGCATCGTTGACTCCCTAAATCATTATTGTATTTTACAGGAAGACATTAAGTTGATGTCCTCTCT TGGATAGGTGTATATCGATTTTCAATTTCGTGGGCAAGGATTCTACCTAGTAAGTATTTTGCAGTTCACATAATTAGTTT CAATAAAATCTGCTCAATTTAATGTTCAAGGGGTGTAACAGGAGGGATATATGGGATGGTAAATCCAAGGGGGATTATGT TCTACAACAAGATTATAAACAATCTGAAGCTTAGAGGTAAGTAACAGTGTCCACTTGGTTATTGTCGTCGAAAATGCTAA TTTATTTTGACCAGTGCGCGTACATGGCTGATATTCCGCCATCCACCATTAGTATTTGTCAAATATGGCCTGTTTCTAGC TTTTGGCCATAATCCATCATCTGCCATTAACAACATTGATTTTGACTTAATAATGACCATTTTTGGCCTTGGCATTTGTC AAGACTCGAGGCATATAAATTAACCCTCCCCAAAATTAAGAACTAAGTTGCTAAGTGAACATCATATATGGTTTAATATT TATATTCATAGAAGTATTAGATTGTCTGTACTCTGTACCTAAATCTGGAGATGGCATGTTAATCCAGGGATTGAACCGTT TGTGACAATTCACCATATGGACCTGCCACAAGAGCTGGAAGAAAGATATGGTGGTTGGCTTAGTCCCCTAATACAGTAAA TTCCTTCTCTCATTTTTGTTTTCTTTTCAGTACTAGTAATATACTACTATATAATGCTAAAGAATTTGAAAGTTTGTCAC TTCTTCATTGACTTACCCCCTAATCTTAGTGCAAAATGGTTATCTGAAATTTGATTTAGGAGAACAGTGAGATGCTGATA ACTATATGCTCTCATTGTGACAGGAGAGATTTTGTTCATTTTGCTGAAATTTGTTTTAAGAGCTTCGGAGACAGGGTGAG GTACTGGGCTACCATCAATGAGCCAAACATTGTTGCAGAGATGGGCTTTATGAGGGGAACATTCCCCCCGGGTCGCTGTT CCCTGCCTTTTGGAAATTGTCATGCTGGTGACTCTGATGTTGAGCCTCTCTATGTCATGCACAACATGTTGCTGTCACAT GGCAAGGCTGTTGAATTATACCGCAAGCGCTTTCAGGTAACAAAGTTGGGCCTAAACTGAAGACATTTGTTGTCACATTT TCTAGGATAAGGGTAAGAAGATTAAGGGTCATGATGACTGTTTTAATCAGTGAGTGTTGATGCTAATCCAGGTAAAGCAA AGGGGAACCATTGGCATTGTCTTAGATGCCTTCATGTATGAACCTCTTAGAGATCATGGACTATTTGATATATTTGATAA ACAAGCTGTGAGTAGGGCCTTGGCTTTTGACATAGGCTGGTAAGTTGTTAAGCAGTGAAGTACCATTTCCATTTTTTCAG TTAGTACTTGCATTAGTATCAAAGGAAAACCAAGAAGAGTTCTGCTAATGATATCATGCCTACATAAACATTATTAATGA AAAAAATTAGCAGCCCAGGATCCTTTAATTCTTGTTAAGACTTTTTCCTGCTTTTTTGTCACATGAAGGGTATTAGATCC CCTGGTTTTTGGCGAGTACCCTGCTGAGATGCGCGCTACTCTTAGGAGCCAGTTGCCGAGATTCTCTCATGAGGAGGAGA GTCTCGTAAAAGGAAGCCTGGACTTCATTGGCATCAATCACTATGGAACTCTTTATGCCAAGGACTGCTCCCTCTCTCCT TGTTCTCATGGTGCAGATCGTCGAATAAGAGGCTTTGCGGAAATAACAGGGATGAAAGATGGCATTCCAATTGGTGATCA GGTACCCTTATGTAGTCCAGCTTCTCTTATTGGTTTATTATATTGTTGGTGGTTGCTCAAATGTTTGACAAATGAATAGG GCATTGATGATAAGAGAATGCTCTTTGTACTAGAATCTTTCCCATAAATTGTATGAATGAGTATGATTGGTCTAAAGAAT GAAAGAGGGTACACTATCATTTTCATCGACTTTTAGCATGTTCTGATCAACTTATTTTCTCTCGGAATCAATTCTGACAG CTAGAAACTACTCACTTAGCTTCTCCCTAGAATTTATTTTGCTTGTAGAATCAATTCTCGTAAGACTTCACATTGACAAT ATCATGATTGTTATGCTTTATCACTTCTTTTTTTGGAAATCCAAATATATTAATCATAATAAAGAAGGAAGAGGCTTTAT CACTTTTCATACTTATTTTAAATAGTATTACCATTGAAGATAATATTTGATTAAATTTCTCTTGTTTAAAGCAGACAGGA GTGTCAAGTTTCTTTGTGGTTCCAAGGGGAATGGAGAAGATTGTTTACTACATAAAGCTAAGATACCATAACATGCCCAT GTATATTACAGAAAACGGTGTGTGAATACTGAATTCATTACATGATCTCATGTGCTCCCATTTGTTTTCTTTTGGCGTAG TTGCTTGATCAATTGATTAATACATTCAAACACTTCACCATGGATTAATGGAAAAAGAAATGACCTATGAAGGCCGCTTT TTGTTATCTAAATTTGGGTTATGAGGTTTGAGTTCTTAAATCATGGATCTACACAAAATTTGTTGCAGGTTATTCTCCAC CGCTCAATCCAGATGTGATATTGAATGATTTACAAGATTTCAAAAGAATAGAGTTTCATAAAGCCTACCTTGCATAGTTT TTAGACATATTTTCAGTTACTTGTTGACAAGGGCTAATTTTATCATCAAGAATGATACTTAGACACCTACAAGCACTCCA TTTCCCCCTATCTCTCTCTTCTTACCTATATCCACATCAATTACTTCACTCTATTCTCTTTCCTCTTTTACTCTGGGTGT CTGCGGGGAGTCTACACTATGCAGATGTCCACAAATGATTTTCATTTTATCATGTGCAGGGAAGGTGCAGATGTAAGAGG ATATATGATATGGTCATTGTTTGACAACTTTGAATGGGCAAGTGGCTATGACATAAGATTTGGGCTTTATTATGTGGATA GACATACACTTGAACGAATTCCAAAACTTTCTGCCCAGTGGTTTTCTAGCTTTCTCAACAACACTAGGGACACCTACAAA GAGAACTTGAATGAGCGATTTACAAGCAAAGATGTGACTCCTGATGGTTTCGAAGCTATTTGAACTAGCTGGAATGTATG GGCAGTAGTGTGATTTCCTGTGCTATGAATGGCTGCATAAAATCTTTATGTTATCTAATAATGGTGGGAATTTATCTCAT CTAATCTTATCTGAGAGAGATGTTCTCAGAATTCTTATATTGAGTAATCTAATTTATGTTATTCGAAAAAATAATTATGA AGTTTAGCATCAGTCGCCAGGCTGATGACTGATGCTAATATACAAATTTTGTATCGGATAAATTAACCTAAATTAGCCGA TGCTTCAGTGTATTTTTACTTAGCGTCATCTCAGTTGATGCTAAAATCAGTAACAACTTCCCTAGGATGTGTGCTTCCTG ACTACAGGGGAACTAGACCTCAGTAGAAAGTAAGAACAAGAGGAGTACGAGGGCTAGCGACAAACACATGGGTAAGAATA TAAAATGAAAGCAATAAACTTATCTACTTGAACTTGAATACTTGTGCTTTCTTATCTTCATAATCTTCAACCTTTTTATA TTTTTTTTGTTGATGTTGGTGTCTTCATAAAAACCTAGTCAAGGTCGAGGAGAGACTCTTCTTCACAATCTTCCCCTTCC ACATCTTGAAATTTTAAGCACATTGATGAAAATTGTAACACCCCAC
CDS sequence (LotjaGi3g1v0265700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTAAATCCAAGGGGGATTATGTTCTACAACAAGATTATAAACAATCTGAAGCTTAGAGGGATTGAACCGTTTGTGAC AATTCACCATATGGACCTGCCACAAGAGCTGGAAGAAAGATATGGTGGTTGGCTTAGTCCCCTAATACAGAGAGATTTTG TTCATTTTGCTGAAATTTGTTTTAAGAGCTTCGGAGACAGGGTGAGGTACTGGGCTACCATCAATGAGCCAAACATTGTT GCAGAGATGGGCTTTATGAGGGGAACATTCCCCCCGGGTCGCTGTTCCCTGCCTTTTGGAAATTGTCATGCTGGTGACTC TGATGTTGAGCCTCTCTATGTCATGCACAACATGTTGCTGTCACATGGCAAGGCTGTTGAATTATACCGCAAGCGCTTTC AGGTAAAGCAAAGGGGAACCATTGGCATTGTCTTAGATGCCTTCATGTATGAACCTCTTAGAGATCATGGACTATTTGAT ATATTTGATAAACAAGCTGTGAGTAGGGCCTTGGCTTTTGACATAGGCTGGGTATTAGATCCCCTGGTTTTTGGCGAGTA CCCTGCTGAGATGCGCGCTACTCTTAGGAGCCAGTTGCCGAGATTCTCTCATGAGGAGGAGAGTCTCGTAAAAGGAAGCC TGGACTTCATTGGCATCAATCACTATGGAACTCTTTATGCCAAGGACTGCTCCCTCTCTCCTTGTTCTCATGGTGCAGAT CGTCGAATAAGAGGCTTTGCGGAAATAACAGGGATGAAAGATGGCATTCCAATTGGTGATCAGACAGGAGTGTCAAGTTT CTTTGTGGTTCCAAGGGGAATGGAGAAGATTGTTTACTACATAAAGCTAAGATACCATAACATGCCCATGTATATTACAG AAAACGGTTATTCTCCACCGCTCAATCCAGATGTGATATTGAATGATTTACAAGATTTCAAAAGAATAGAGTTTCATAAA GCCTACCTTGCATAG
Protein sequence (LotjaGi3g1v0265700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVNPRGIMFYNKIINNLKLRGIEPFVTIHHMDLPQELEERYGGWLSPLIQRDFVHFAEICFKSFGDRVRYWATINEPNIV AEMGFMRGTFPPGRCSLPFGNCHAGDSDVEPLYVMHNMLLSHGKAVELYRKRFQVKQRGTIGIVLDAFMYEPLRDHGLFD IFDKQAVSRALAFDIGWVLDPLVFGEYPAEMRATLRSQLPRFSHEEESLVKGSLDFIGINHYGTLYAKDCSLSPCSHGAD RRIRGFAEITGMKDGIPIGDQTGVSSFFVVPRGMEKIVYYIKLRYHNMPMYITENGYSPPLNPDVILNDLQDFKRIEFHK AYLA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Gene3D | 1 | 324 | 324 | 4.4E-110 | – | |
PANTHER | 2 | 298 | 297 | 1.7E-134 | – | |
Pfam | 2 | 323 | 322 | 4.6E-71 | ||
PANTHER | 2 | 298 | 297 | 1.7E-134 | ||
SUPERFAMILY | 2 | 323 | 322 | 1.93E-88 | ||
PRINTS | 213 | 227 | 15 | 1.9E-6 | ||
PRINTS | 290 | 298 | 9 | 1.9E-6 | ||
PRINTS | 312 | 323 | 12 | 1.9E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi3g1v0265700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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