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LotjaGi3g1v0265700.5

Overview

Field Value
Gene ID LotjaGi3g1v0265700
Transcript ID LotjaGi3g1v0265700.5
Related isoforms 4
Lotus japonicus genome version Gifu v1.2
Description Beta-glucosidase; TAIR: AT4G21760.1 beta-glucosidase 47; Swiss-Prot: sp|Q7XSK0|BGL18_ORYSJ Beta-glucosidase 18; TrEMBL-Plants: tr|V7BUA3|V7BUA3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0265700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:49803468..49808553) extracted from Lotus japonicus Gifu genome v1.2.

ATTCATATCTTTTGGGTAAAGATTGATCCTGAAAAGAAAAAAAAATTGCACTTGAGTCCCAAACTGAAGCCTTCGTTAGC ACTTTTGCATGTCTGTCTAGATTAAATTCCGTTAAAATTAATTAAAAAAATAAAAAATTTAGAAATAAGAAAAACCCAGG TCCTCATCTGCGACACCGGCACGGCGAAACAGAGTGTCTAGATGGTCACAGCGGTGGCAACTTCGGAGGTGACAGAGCAG TCAAGCCCTGGTTTGGCTGAGGCATGGTGGCCCTGGGTTATGGTTGTTTTGTGCGTTTCCAGAGGATGTGAGACAATGGC TCGATAGGAGGTTCAATGGTTCAGGTACGTTGTTCCCGGTGGTGCTTCTTCCATGGCCTTCGATGCTAAAATCACTGTTA ATAGCCATAAATACTAGTGAAAGTTGCTTATAGTTCTATCCATGCCATGGTGACTTTGATTAATCATGGTTTACCAGTTG TATCCAAAGATGTAATCATTTCAAATTCAAATCAATTGGTAGCGATAATACCGAACCTACCTTACTCTATCAATACACAT TATGAAACCTAACTTACCAGAAACCACCAATAGATAATAAATTTTAGTTGCAGTAATCAGGCGCCAGATTACAAATGATT GAAAAATTGAACACCTTACATGGAGGTTTTAAATAAGGAGTGCCAAATTGTATCTGCTTCTCAAGAAACAAAATGACAAT GCAACAGTCGGCACTGCGCGTTGTGTTGTTGACCTTTGTTTGTTGTTTTCATTTTCATGTCCAAAGTTCCCATGATGTTG GAGATGGAATCAGCAGATTTAATTTCCCAAGAGGGTTCCTTTTCGGAGCAAGTACTTCGTCTTACCAGGTAAATTGTTCT TGCAATTGCCAATTATCAATGGTTTATTTCTGTCCTGAAATATGTATACTTTGTTGTTTCTAAATAAAAAAAAGATTGAA GGAGCAGCTTTTGAAGGTGGTAAAGGTTTAAGCAACTGGGATGCTTTTTCCCACATACCAGGTAAGTGGTGACTGGTGAT TTCATATCTTACTCTACCTTGATTGTTTGTTGTGCATACAGTTATAGAATTTCAACATTGTGCATGAGCATGGATAATCA CACTTCAGTTTACTGAATTTTCAGGAAATATAAAACATAATGAAACTGGTGATGTAGCTGATGATCATTATCATCGCTAT TTGGTAATACTAATCTGATATTATGATATATATATATATATATATATATACATATATCAACTTCACATTTTACTTGCCTT AACTAAACGCTAGCTTGCATCGTTGACTCCCTAAATCATTATTGTATTTTACAGGAAGACATTAAGTTGATGTCCTCTCT TGGATAGGTGTATATCGATTTTCAATTTCGTGGGCAAGGATTCTACCTAGTAAGTATTTTGCAGTTCACATAATTAGTTT CAATAAAATCTGCTCAATTTAATGTTCAAGGGGTGTAACAGGAGGGATATATGGGATGGTAAATCCAAGGGGGATTATGT TCTACAACAAGATTATAAACAATCTGAAGCTTAGAGGTAAGTAACAGTGTCCACTTGGTTATTGTCGTCGAAAATGCTAA TTTATTTTGACCAGTGCGCGTACATGGCTGATATTCCGCCATCCACCATTAGTATTTGTCAAATATGGCCTGTTTCTAGC TTTTGGCCATAATCCATCATCTGCCATTAACAACATTGATTTTGACTTAATAATGACCATTTTTGGCCTTGGCATTTGTC AAGACTCGAGGCATATAAATTAACCCTCCCCAAAATTAAGAACTAAGTTGCTAAGTGAACATCATATATGGTTTAATATT TATATTCATAGAAGTATTAGATTGTCTGTACTCTGTACCTAAATCTGGAGATGGCATGTTAATCCAGGGATTGAACCGTT TGTGACAATTCACCATATGGACCTGCCACAAGAGCTGGAAGAAAGATATGGTGGTTGGCTTAGTCCCCTAATACAGTAAA TTCCTTCTCTCATTTTTGTTTTCTTTTCAGTACTAGTAATATACTACTATATAATGCTAAAGAATTTGAAAGTTTGTCAC TTCTTCATTGACTTACCCCCTAATCTTAGTGCAAAATGGTTATCTGAAATTTGATTTAGGAGAACAGTGAGATGCTGATA ACTATATGCTCTCATTGTGACAGGAGAGATTTTGTTCATTTTGCTGAAATTTGTTTTAAGAGCTTCGGAGACAGGGTGAG GTACTGGGCTACCATCAATGAGCCAAACATTGTTGCAGAGATGGGCTTTATGAGGGGAACATTCCCCCCGGGTCGCTGTT CCCTGCCTTTTGGAAATTGTCATGCTGGTGACTCTGATGTTGAGCCTCTCTATGTCATGCACAACATGTTGCTGTCACAT GGCAAGGCTGTTGAATTATACCGCAAGCGCTTTCAGGTAACAAAGTTGGGCCTAAACTGAAGACATTTGTTGTCACATTT TCTAGGATAAGGGTAAGAAGATTAAGGGTCATGATGACTGTTTTAATCAGTGAGTGTTGATGCTAATCCAGGTAAAGCAA AGGGGAACCATTGGCATTGTCTTAGATGCCTTCATGTATGAACCTCTTAGAGATCATGGACTATTTGATATATTTGATAA ACAAGCTGTGAGTAGGGCCTTGGCTTTTGACATAGGCTGGTAAGTTGTTAAGCAGTGAAGTACCATTTCCATTTTTTCAG TTAGTACTTGCATTAGTATCAAAGGAAAACCAAGAAGAGTTCTGCTAATGATATCATGCCTACATAAACATTATTAATGA AAAAAATTAGCAGCCCAGGATCCTTTAATTCTTGTTAAGACTTTTTCCTGCTTTTTTGTCACATGAAGGGTATTAGATCC CCTGGTTTTTGGCGAGTACCCTGCTGAGATGCGCGCTACTCTTAGGAGCCAGTTGCCGAGATTCTCTCATGAGGAGGAGA GTCTCGTAAAAGGAAGCCTGGACTTCATTGGCATCAATCACTATGGAACTCTTTATGCCAAGGACTGCTCCCTCTCTCCT TGTTCTCATGGTGCAGATCGTCGAATAAGAGGCTTTGCGGAAATAACAGGGATGAAAGATGGCATTCCAATTGGTGATCA GGTACCCTTATGTAGTCCAGCTTCTCTTATTGGTTTATTATATTGTTGGTGGTTGCTCAAATGTTTGACAAATGAATAGG GCATTGATGATAAGAGAATGCTCTTTGTACTAGAATCTTTCCCATAAATTGTATGAATGAGTATGATTGGTCTAAAGAAT GAAAGAGGGTACACTATCATTTTCATCGACTTTTAGCATGTTCTGATCAACTTATTTTCTCTCGGAATCAATTCTGACAG CTAGAAACTACTCACTTAGCTTCTCCCTAGAATTTATTTTGCTTGTAGAATCAATTCTCGTAAGACTTCACATTGACAAT ATCATGATTGTTATGCTTTATCACTTCTTTTTTTGGAAATCCAAATATATTAATCATAATAAAGAAGGAAGAGGCTTTAT CACTTTTCATACTTATTTTAAATAGTATTACCATTGAAGATAATATTTGATTAAATTTCTCTTGTTTAAAGCAGACAGGA GTGTCAAGTTTCTTTGTGGTTCCAAGGGGAATGGAGAAGATTGTTTACTACATAAAGCTAAGATACCATAACATGCCCAT GTATATTACAGAAAACGGTGTGTGAATACTGAATTCATTACATGATCTCATGTGCTCCCATTTGTTTTCTTTTGGCGTAG TTGCTTGATCAATTGATTAATACATTCAAACACTTCACCATGGATTAATGGAAAAAGAAATGACCTATGAAGGCCGCTTT TTGTTATCTAAATTTGGGTTATGAGGTTTGAGTTCTTAAATCATGGATCTACACAAAATTTGTTGCAGGTTATTCTCCAC CGCTCAATCCAGATGTGATATTGAATGATTTACAAGATTTCAAAAGAATAGAGTTTCATAAAGCCTACCTTGCATAGTTT TTAGACATATTTTCAGTTACTTGTTGACAAGGGCTAATTTTATCATCAAGAATGATACTTAGACACCTACAAGCACTCCA TTTCCCCCTATCTCTCTCTTCTTACCTATATCCACATCAATTACTTCACTCTATTCTCTTTCCTCTTTTACTCTGGGTGT CTGCGGGGAGTCTACACTATGCAGATGTCCACAAATGATTTTCATTTTATCATGTGCAGGGAAGGTGCAGATGTAAGAGG ATATATGATATGGTCATTGTTTGACAACTTTGAATGGGCAAGTGGCTATGACATAAGATTTGGGCTTTATTATGTGGATA GACATACACTTGAACGAATTCCAAAACTTTCTGCCCAGTGGTTTTCTAGCTTTCTCAACAACACTAGGGACACCTACAAA GAGAACTTGAATGAGCGATTTACAAGCAAAGATGTGACTCCTGATGGTTTCGAAGCTATTTGAACTAGCTGGAATGTATG GGCAGTAGTGTGATTTCCTGTGCTATGAATGGCTGCATAAAATCTTTATGTTATCTAATAATGGTGGGAATTTATCTCAT CTAATCTTATCTGAGAGAGATGTTCTCAGAATTCTTATATTGAGTAATCTAATTTATGTTATTCGAAAAAATAATTATGA AGTTTAGCATCAGTCGCCAGGCTGATGACTGATGCTAATATACAAATTTTGTATCGGATAAATTAACCTAAATTAGCCGA TGCTTCAGTGTATTTTTACTTAGCGTCATCTCAGTTGATGCTAAAATCAGTAACAACTTCCCTAGGATGTGTGCTTCCTG ACTACAGGGGAACTAGACCTCAGTAGAAAGTAAGAACAAGAGGAGTACGAGGGCTAGCGACAAACACATGGGTAAGAATA TAAAATGAAAGCAATAAACTTATCTACTTGAACTTGAATACTTGTGCTTTCTTATCTTCATAATCTTCAACCTTTTTATA TTTTTTTTGTTGATGTTGGTGTCTTCATAAAAACCTAGTCAAGGTCGAGGAGAGACTCTTCTTCACAATCTTCCCCTTCC ACATCTTGAAATTTTAAGCACATTGATGAAAATTGTAACACCCCAC
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0265700.5) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGTAAATCCAAGGGGGATTATGTTCTACAACAAGATTATAAACAATCTGAAGCTTAGAGGGATTGAACCGTTTGTGAC AATTCACCATATGGACCTGCCACAAGAGCTGGAAGAAAGATATGGTGGTTGGCTTAGTCCCCTAATACAGAGAGATTTTG TTCATTTTGCTGAAATTTGTTTTAAGAGCTTCGGAGACAGGGTGAGGTACTGGGCTACCATCAATGAGCCAAACATTGTT GCAGAGATGGGCTTTATGAGGGGAACATTCCCCCCGGGTCGCTGTTCCCTGCCTTTTGGAAATTGTCATGCTGGTGACTC TGATGTTGAGCCTCTCTATGTCATGCACAACATGTTGCTGTCACATGGCAAGGCTGTTGAATTATACCGCAAGCGCTTTC AGGTAAAGCAAAGGGGAACCATTGGCATTGTCTTAGATGCCTTCATGTATGAACCTCTTAGAGATCATGGACTATTTGAT ATATTTGATAAACAAGCTGTGAGTAGGGCCTTGGCTTTTGACATAGGCTGGGTATTAGATCCCCTGGTTTTTGGCGAGTA CCCTGCTGAGATGCGCGCTACTCTTAGGAGCCAGTTGCCGAGATTCTCTCATGAGGAGGAGAGTCTCGTAAAAGGAAGCC TGGACTTCATTGGCATCAATCACTATGGAACTCTTTATGCCAAGGACTGCTCCCTCTCTCCTTGTTCTCATGGTGCAGAT CGTCGAATAAGAGGCTTTGCGGAAATAACAGGGATGAAAGATGGCATTCCAATTGGTGATCAGGGAAGGTGCAGATGTAA GAGGATATATGATATGGTCATTGTTTGA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0265700.5) extracted from Lotus japonicus Gifu v1.2 Proteins.

MVNPRGIMFYNKIINNLKLRGIEPFVTIHHMDLPQELEERYGGWLSPLIQRDFVHFAEICFKSFGDRVRYWATINEPNIV AEMGFMRGTFPPGRCSLPFGNCHAGDSDVEPLYVMHNMLLSHGKAVELYRKRFQVKQRGTIGIVLDAFMYEPLRDHGLFD IFDKQAVSRALAFDIGWVLDPLVFGEYPAEMRATLRSQLPRFSHEEESLVKGSLDFIGINHYGTLYAKDCSLSPCSHGAD RRIRGFAEITGMKDGIPIGDQGRCRCKRIYDMVIV
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.20.20.80
1 273 273 8.4E-92 –
PANTHER
PTHR10353:SF175
2 265 264 4.6E-124 –
PANTHER
PTHR10353
2 265 264 4.6E-124
IPR001360
Pfam
PF00232
2 231 230 1.4E-59
IPR001360
SUPERFAMILY
SSF51445
2 238 237 7.29E-75
IPR017853

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004553
Molecular function Hydrolase activity, hydrolyzing O-glycosyl compounds Catalysis of the hydrolysis of any O-glycosyl bond.
Subterm of
GO:0005975
Biological process Carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0265700.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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