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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0284100 |
| Transcript ID | LotjaGi3g1v0284100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Flowering-promoting factor 1-like protein 1; TAIR: AT5G24860.1 flowering promoting factor 1; Swiss-Prot: sp|O24340|FPF1_SINAL Flowering-promoting factor 1; TrEMBL-Plants: tr|M5WHZ4|M5WHZ4_PRUPE Uncharacterized protein; Found in the gene: LotjaGi3g1v0284100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:57264536..57265350) extracted from Lotus japonicus Gifu genome v1.2.
CTGGTTTATAAGAGTGATCCTTCATCTGATAATTCCAATCATATAGCCGTCTTCCTCCAACTGAAATGAAGAAGCAATAA TTCCCCTGTCTGTCACACAAACACAAACACAAACACAAACACAAACAACACAAACACAAACACAAACACACATGTAGATC GAAACAGAGACACACAGCAATGTCTGGTGTATGGGTATTCAATCACAAGAACGGAGTAGCGAGGCTGATAACAAACCCAA CAAGGGAATCCTTCGAGCACACACACCCAACAACCACCACCGATCATCATCATCCAGGCACAGCCACCGCACCCGGCGCA AGACCAAGAGTTTTGGTCTTCCTCCCCAGCAACCAGGTCATCCGTTCCTACTCAGAACTCGAGCAACGACTCGTCCAACT CGGCTGGACTCGCTACCCTAACTCGCTCCGCCCTGACCTCGTCCAGTTCCACCGCTCACACTCCTCCTCACACCTCATCT CCCTCCCTAGAAATTTTGATAACTTCAAGCACTTTCATTTGTACGACATCGTCGTTAAAAATCGCTCCTTCTTTCAAGTT CGTGACCCCAATTATATACCCTAAGTAGCTTAAACCTTACCATGCCCTTAATTTCAATCAGTATGTACATTTTCATCGGT TCGTTATGCCATAGAATTAGAATTATTGTAGCTATATATGATTAAGCGTGGGCATGGTTCACTTCGTTGTACCATGTTTG TGATGAAATAGTAGTTAATATTAGTATTGATCTTTCTCACCAGTAAACCATTTCAAATTCCTCACTATAGTATTAATTAA TTAATTTCATGTGTG
CDS sequence (LotjaGi3g1v0284100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTGGTGTATGGGTATTCAATCACAAGAACGGAGTAGCGAGGCTGATAACAAACCCAACAAGGGAATCCTTCGAGCA CACACACCCAACAACCACCACCGATCATCATCATCCAGGCACAGCCACCGCACCCGGCGCAAGACCAAGAGTTTTGGTCT TCCTCCCCAGCAACCAGGTCATCCGTTCCTACTCAGAACTCGAGCAACGACTCGTCCAACTCGGCTGGACTCGCTACCCT AACTCGCTCCGCCCTGACCTCGTCCAGTTCCACCGCTCACACTCCTCCTCACACCTCATCTCCCTCCCTAGAAATTTTGA TAACTTCAAGCACTTTCATTTGTACGACATCGTCGTTAAAAATCGCTCCTTCTTTCAAGTTCGTGACCCCAATTATATAC CCTAA
Protein sequence (LotjaGi3g1v0284100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSGVWVFNHKNGVARLITNPTRESFEHTHPTTTTDHHHPGTATAPGARPRVLVFLPSNQVIRSYSELEQRLVQLGWTRYP NSLRPDLVQFHRSHSSSHLISLPRNFDNFKHFHLYDIVVKNRSFFQVRDPNYIP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 130 | 130 | 1.2E-63 | – | |
| PANTHER | 1 | 130 | 130 | 1.2E-63 | ||
| MobiDBLite | 18 | 46 | 29 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Regulation of flower development | Any process that modulates the frequency, rate or extent of flower development. |
Expression pattern of LotjaGi3g1v0284100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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