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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0288300 |
| Transcript ID | LotjaGi3g1v0288300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transcription factor; TAIR: AT1G21200.1 sequence-specific DNA binding transcription factor; Swiss-Prot: sp|Q7U5L7|MQO_SYNPX Probable malate:quinone oxidoreductase; TrEMBL-Plants: tr|A0A0R0G3N1|A0A0R0G3N1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0288300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:58359019..58361157) extracted from Lotus japonicus Gifu genome v1.2.
GTAAACTATCCCTTTCCCTTGTCTCTTTCTGTCTACTTGCTCTTCACTGTTCTACCCATCGTTGGTGTCGTCAACAGGTA AACCTTAAACGAGATCCATATTCATTTTTCTCTGTTTTTTGTCACTCAACTTTTGTTTCTGAATATCTGCTCATGATTTT TGTTCTTGGGAATTTGGATTTGTACTCAATGGTGTTTCTGTATCTCATAAACCCAACAGAACAAACTAGTTTTGATTTAT ATGATTACTAGTTAGTGTGCTCTGTAATCACCAATTTGTGGATTCTTTGCTTTTTATTTTGTTTAGGAGATCATGTTCTG AAGAACTAGACTTGGCTTCAGTTTTCCTATGGTGTTGAGATGAATTAACTGGTATAGATACTTATCTGATCACAAACCCA ATTGGAGTTGAAATTTCAGTTTCTGTCCAGTATCTGAATTTTGAGAATTAGGGTTTGGGGATTGTGTTCACAGAATGAAT AATTCCGGTTTGGGGGGTGGTTTTTTGGCTGGTCCCAGTGGTGGGATTTTGGACCTGGAATCGCCGTTCCGTAGGCACCA ACAGACCCAGTTGGGTCATCCATCGGTGACTGGTCAACAGCACATGAATGTTATGAGTGGTTTGGATAATGATCACCCAA TTGGCCTGGTTGAAGTGAAAAGTTTGAATGCGGCGTTGAATTTCGGTAAAGGGAAGGCGGTTGCTCTTTGTAATCATGTC AATATTAATGATCTCAGCGAAGATGATGAGCTGGGTTATGCGGAAGACGGGAATTGCGAGCACTTGGATGGGGGCAAGAG CAAAAAGGGGTCTACGTGGCAGCGAATGAAGTGGACAGACAACATAGTTGGGCTTCTTGTAGCTGTGGTGAGCTGTGTGG ATGATGATGGCACGATTGGTGCTGGCATGGAACGTGTTAAAAGGAAATATGGGGCTTTACAAAAGAAGGGCAAGTGGAAA ACGGTCTCCAAGATAATGATAAGCAAGGGTTGCCATGTTTCGCCCCAGCAATGTGAGGACAAATTCAATGACTTGAATAA GAGATACAAGAGGTTAAATGAAATACTTGGAAGGGGAACTTGTTGCCAAGTGGTTGAGAATCCTGCACTGCTTGATTCAA TGCCGAACTTGTCAGCTAAGATGAAGGATGCTGTTAGAAAGATACTGAGCTCAAAACACTTATTTTATAAGGAGATGTGT GCCTACCACAATGGGCAAAGGTTACCAAATTCCTATGATCTTGACTTACATGGTTATTCTCTGGAACATGGGAGGGACTC TAGAGATAATAATGGTTCTGAAGACGAAGCTGAGGATAACAATGAAAGCGAGGATGATGGGGTGGATAATGAAATTAATA TCAATGCACGTGGGGACGGTGGGAGGATGGAGGAGTTATGCGATAGAAATAAACAGAGTGAGGAGGATGGTCACTTTTGG CCACGATCTGTTCGGATGGATAAATTTCAGGTTGAAATGGACAAGATTTTTCAAGACCCTGCAAAGCCATTGTGGGAACA AAGAGAGTGGATTAAGATGCAGCTGTTGCAGCTTCAAGAGGAAAATGTCGGTTACCAAGCCCAAGCTCTTGAACTTGAAA AACAACGGTTTAAGTGGTTAAGATACTGCAGCAAGAAGGACAGGGAGCTGGAGAAATTGAGGTTGGAGAACAAGAAGATG AAATTGGAAAATGAGCACAGGATCTTGAAACTCAAGCAGAAAGAGCACGAGACAGATTGCAACAGGTCTGAGATGTCCTT AGACCCTGCCTCTCATGGAATCAACAGGCCGCAAAGGAGGGAACATATCAACCTGGCCAGACAACAGTAGCTCCAGCACA GAAAGGATTGATCTTCATTGTTTAAATAATGTATGAAATGAAACCTTCTTGTTTAAACTGTTAGGCCAACATAGTAGGTT ATATATTTAGGATTGCATTGATCTTGAAAATGAATCATGTATTAAATTATTCTGGGGTTTTTAGTTATACAAGTGGACAT TTTCCCTTTGAGTTGTCCCCATCTTTAAGAACAAACTGTTACTAAATCATTTTTCTTACCTTTTACAATGCCAAGACATT AGAAATTGAGCATAAAAGCGTAAACTCATTTTGGAATGAAATGAAATAAATGTTTTGCC
CDS sequence (LotjaGi3g1v0288300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATAATTCCGGTTTGGGGGGTGGTTTTTTGGCTGGTCCCAGTGGTGGGATTTTGGACCTGGAATCGCCGTTCCGTAG GCACCAACAGACCCAGTTGGGTCATCCATCGGTGACTGGTCAACAGCACATGAATGTTATGAGTGGTTTGGATAATGATC ACCCAATTGGCCTGGTTGAAGTGAAAAGTTTGAATGCGGCGTTGAATTTCGGTAAAGGGAAGGCGGTTGCTCTTTGTAAT CATGTCAATATTAATGATCTCAGCGAAGATGATGAGCTGGGTTATGCGGAAGACGGGAATTGCGAGCACTTGGATGGGGG CAAGAGCAAAAAGGGGTCTACGTGGCAGCGAATGAAGTGGACAGACAACATAGTTGGGCTTCTTGTAGCTGTGGTGAGCT GTGTGGATGATGATGGCACGATTGGTGCTGGCATGGAACGTGTTAAAAGGAAATATGGGGCTTTACAAAAGAAGGGCAAG TGGAAAACGGTCTCCAAGATAATGATAAGCAAGGGTTGCCATGTTTCGCCCCAGCAATGTGAGGACAAATTCAATGACTT GAATAAGAGATACAAGAGGTTAAATGAAATACTTGGAAGGGGAACTTGTTGCCAAGTGGTTGAGAATCCTGCACTGCTTG ATTCAATGCCGAACTTGTCAGCTAAGATGAAGGATGCTGTTAGAAAGATACTGAGCTCAAAACACTTATTTTATAAGGAG ATGTGTGCCTACCACAATGGGCAAAGGTTACCAAATTCCTATGATCTTGACTTACATGGTTATTCTCTGGAACATGGGAG GGACTCTAGAGATAATAATGGTTCTGAAGACGAAGCTGAGGATAACAATGAAAGCGAGGATGATGGGGTGGATAATGAAA TTAATATCAATGCACGTGGGGACGGTGGGAGGATGGAGGAGTTATGCGATAGAAATAAACAGAGTGAGGAGGATGGTCAC TTTTGGCCACGATCTGTTCGGATGGATAAATTTCAGGTTGAAATGGACAAGATTTTTCAAGACCCTGCAAAGCCATTGTG GGAACAAAGAGAGTGGATTAAGATGCAGCTGTTGCAGCTTCAAGAGGAAAATGTCGGTTACCAAGCCCAAGCTCTTGAAC TTGAAAAACAACGGTTTAAGTGGTTAAGATACTGCAGCAAGAAGGACAGGGAGCTGGAGAAATTGAGGTTGGAGAACAAG AAGATGAAATTGGAAAATGAGCACAGGATCTTGAAACTCAAGCAGAAAGAGCACGAGACAGATTGCAACAGGTCTGAGAT GTCCTTAGACCCTGCCTCTCATGGAATCAACAGGCCGCAAAGGAGGGAACATATCAACCTGGCCAGACAACAGTAG
Protein sequence (LotjaGi3g1v0288300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNNSGLGGGFLAGPSGGILDLESPFRRHQQTQLGHPSVTGQQHMNVMSGLDNDHPIGLVEVKSLNAALNFGKGKAVALCN HVNINDLSEDDELGYAEDGNCEHLDGGKSKKGSTWQRMKWTDNIVGLLVAVVSCVDDDGTIGAGMERVKRKYGALQKKGK WKTVSKIMISKGCHVSPQQCEDKFNDLNKRYKRLNEILGRGTCCQVVENPALLDSMPNLSAKMKDAVRKILSSKHLFYKE MCAYHNGQRLPNSYDLDLHGYSLEHGRDSRDNNGSEDEAEDNNESEDDGVDNEININARGDGGRMEELCDRNKQSEEDGH FWPRSVRMDKFQVEMDKIFQDPAKPLWEQREWIKMQLLQLQEENVGYQAQALELEKQRFKWLRYCSKKDRELEKLRLENK KMKLENEHRILKLKQKEHETDCNRSEMSLDPASHGINRPQRREHINLARQQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 448 | 448 | 7.2E-200 | – | |
| PANTHER | 1 | 448 | 448 | 7.2E-200 | – | |
| Pfam | 117 | 243 | 127 | 1.1E-16 | – | |
| Gene3D | 141 | 193 | 53 | 1.7E-6 | – | |
| MobiDBLite | 265 | 316 | 52 | - | – | |
| MobiDBLite | 277 | 291 | 15 | - | – | |
| Coils | 357 | 377 | 21 | - | – | |
| Coils | 385 | 421 | 37 | - | – | |
| MobiDBLite | 415 | 451 | 37 | - | – | |
| MobiDBLite | 436 | 451 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0288300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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