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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0290200 |
| Transcript ID | LotjaGi3g1v0290200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ribose-phosphate pyrophosphokinase 2; TAIR: AT5G12930.1 inactive rhomboid protein; Swiss-Prot: sp|Q9VJE5|CL190_DROME Restin homolog; TrEMBL-Plants: tr|A0A0S3SG32|A0A0S3SG32_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0290200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:59220926..59225147) extracted from Lotus japonicus Gifu genome v1.2.
CTATACATGAAGAAAAAGAAAAACTTGATCATCCATCCACATATAAATTTTGAAAAAGAACCTTTACTGACAAATTTGTC TCTGTGTATTTTGTTTTTATACCAAAAGAGAAAATTTTAGGGGTTGTAAGTTTTGTATGCACCCAAATCCAAGTCCAACC AATATTCACAAACACCAGCTCACTCACTGGTTTCCCTCTCAAAACTCAAATATTTGAACCAACAACACAATGCCTCTGCT TCTGCCTGCCCTTTGAATCACTCACGCGCCACCATGGACGACGCAAACGGTGGCGCAGTACCTCCACCACCACCGTGCCT CGTATCTATCGCCCCATTCTCCTCCCGCCGGCGCCGCCTCTCCGCCACCTTCGTGCGGCAGAGCCTCCCTGTCTCGCCAG TGGCATGGATATCCCTCCAGGGACGGCTCATCAACGCCGAAGAAGCCAGCTCGGCGAGAATCATCCGCGGTGGCTTAACC TCCGAACAAGCCCTCGCCTGGGACCTCTTCCCTCCGATCCACCGGTTCCTCATCGTCGCCGTCATAGGCGCCGCCGTCGC TCAGTCGCAGAAAAACCGTCAGATATGGTACCTTCAGAAGTCCGTTGAACTCAGAGTAAGGGCTCAATTTAATGCATCTC TGATTCTGTTTTTCTTCATGCTTGATTGCAATTTATTCGAGGGTTTCAATTTCAGCTTGCATTCATTTTGTTTGTCAAGA AAACTGGAACACCGTTACCGTTTCGGGTTTCGAAATTGATACCTAAATCTAATTTCTTTAATTTCCCTTTCATTTTGAAG CAACAATTCAAATGTAATGTAATTTAGTTTTAAATTTGCATGCCTTTGATTTTAATTCTTCTAAAGTTTGTATGTATGGG TCAATTTTGCTTTGTTTCATCATTTTATCAGGACCAGGTGCTATCAAGCATGCAGCAGAAGCTGGACAATCTTTGTGAGC AGGTTAACACTTCTAAAGAAAACTCACCAGCTGCCATCAAGGATAGTGAACTGAAACTGGATGATGAAGCTTTCGGCACC GAGAAGATTAAGTTTGTTGATTGTGGTTGTTGGCATTGCGAACGGCATTCTCCCTTTTTTAATGAATCCATGGTAAGAAC TCTTTTGGTGCTTGTGGCCTATTATAACTGTCAATACTAAACAGCTTGGTTTTGATTTTGATCACTTATTGACTTGATTA GCAGGATGCCTCTGCTATGAGAGCCTCCAGTGGAAATGAGGTGCTCCAATATAAGATGCCTTGCAGTAATGAAGAGCAAG AGGAGCGAAGAATGTCCGATTTGTCAGACTTAGCTTCAAGTGTGACATCTGCAGCTGATATCCAGGTACTATTTTCAAAT TTCTTCACTCATTTGTTGGGTTCCTATATGAATGAGCAAAGATACCAACATTTCTTTTGTACACCGCTTCTTATCTAGCA TTGTCAGTTTGGGTAAATAGCTTAATCGAGCACTTATGACAGTAAACACTTATTACATAAACATTTATTCATAAGCTAAT TTGAGAAGTTTATTAAATAAGTTTAAATTAGCTTATAGCTAGGTATAAGTCCTTATTCACAAGCTAATAGGAGTTGCTTA TGAAAATAAACTCAAAACAACTTATAATAAGCTATTTTAATAAGTTTACCCAAGCACTTGTATAAGCACAAAGTCATAAA CTCTTCCAAACACATTAGTAGTAGTAACTTCTTGTTGTTCTTTCTGACAAAATTAGTTTCTTGGTCTTTTTACAATTTGG TTGAACCCATTATTGTAATGTTTTTGTAAGGCTGATCTTGATATTGATTTTCCTATTATAAGTACAGCATCAATCTGATT TTCCGCCACCATGTCATGTGTCACTGTATATATAACTTGTTCAAATGGAGTTCTCATGAATCATCCTGATCAAACATTTT TGTAGTTTGTATGCATTCCACAGCCTTGACTTTGACTGGAACCAGGATAATTAATTAATTGCAATTGCTTAATTATGTTG TTGCGCCACTAAAAAGTAAAGATAACTAACCATACATGGAGTATGTGTCATGATATGAATGGAAGGAGTGCAGAGTACTC AGTACAATTAGAGGACTGAAATTTTCTGCTTAATTGAAATTCTATAATTGTCTTGTTATTTCTACCTACTTTCGGCAATG CTTCATTTTTCTGGTTTTCTTATATATTCTTAAGTTCCACCATCATTTAACTATTATATGCAAATATGCTTCTCCTTTCA TTCTTTTTGGTACTTTGTCATGCCTTGTGACTTGTCTTATCCACAGTTGAACAACTTGGCTGTAGAACAAGATATTTATA ATCTTAAGAGAGACTGTGAAGAGAAGAATACGACAATTAAAGAGCTAACCACTCAGCTGAACTATTCTGAAGTTGCTAAT AGCAAGGTAATACTTATTTACATTTTATTCTCGTTAGTTAGAATTTTGAATTTCTCTTTCTCTTTGTTTAATCCACTCAC TACTCCAACTACTATTTGATACAGAGGGTTACTGAATTAGAAGACATTATACGAAGGAAGAATACAACAATTACTAAATT GAAGAATGATTTGGTGGTTCTTGAACAAAAGGTATTATATTCATCCTAGATATAAAAAATTGAGATGCACCAGGTTGGTA GCTTAGGTATTTAAGTTGATTGTCTAACACAACCTTTGTTAGATACTTGAATATATATTGCATGATGAGAAACCAAATCC TGAATTTGCATTGCTATGGAATAAGCACATAACACTACTGATTACTCTATAAAGCACTGAAAGCAGAGTTAAAGAACTGT TCCTTATCCATCAATTTGAAATGCTTCTTTTACAACTGGCTTTTTCACAATTGACCTCAGGTTGTGCAACTTACAAGACT CCGTAGAGCCTCCTTCTCTGCTAGTACTTCAAATTGCAGCCCACTGCCGCAAATGAGAGATAACCTCGTTTATGATATGG ATAGCACCACTAGTCCCTCATCTTCTGATACAGATGGTTCTCCTGCTAACAAGGCACAAGATCCTCAAGTTGATGTCATT GTCTCGAACCAGGGTTCTGCTTCCGGGATTGATCAGATACCTATGCCAGCAGAAGTCTTCAGTTCTTCAGGCAGAGTCTT TGAACGCCGCTCAAAAACAAAATCGCGATCCATTAGTCCTCTTAAAGAGGTTTCAATGAATCGGAAATCTAATGCTGCTT CTTCTTCTTCAAGTCCAAAGCAATTGTCAGCTCGTGGGGACTTGAAAAAGAGTAGAAGACGATCTCTTAATGGACCTAAG AGTGCAACTGCACTTAAGAGATGGGTACAGTAATGAGTAAGTAATCTTGAATAATGTTTACATTAAAGCATAGAATTTTA TTCGCTTGTGTTAAAACTTCTATAAGCATGTTTGGATCAACTTCTTTTTCTTCAGAATCAATTTTGAAAGGCAGAAGTTA CTCACATTAGCTTGTCCACTGAGTTAATTACGATTTTAGAATCAATTGTAGAAGAATTTTCAAAAATGCACCATTTCATT GCTTTTTTAATTCTCAACCATTTAGAGTCTGCTGCATTATCGGTTTGCATCAGTGCAAACAAATGCTTTTCAAGAAAAAA AGTGAATGCTTTCCATAAGGATCTAGTGGGAAGTCCATTCACACTACACTCTCAATCATTACCCAAACACATGCTTATCG GACATCTTTATGTTGAATTTGAAGCTAATGAACTAAGAACATTGCAAGTATGGTATAAACATATTCTCCATAGCAGCAAA TTTCTTCACATGTTTGCTAGAAATTTACACCATGCCCTCAACTATGGCCATCAATGAACGCTTTTTTTATTTTGATATTT TTGTTTTGATTTTATCTTTCACTAAGTGGCCACTTTCACATATGTTCATTCATTTTCATTTCTCATTGTAGGTTGCTATG GGACGCAGGTCGAGGGTAAAGGATTCGCTATGTTATGCAGTTAGCCAGCGGGATCAAATAGTGTTAAATAGGATGTAGTA AATATGCCAGAGGAGTATAGTGATATAAATTATTTACTTGAGTTTTGGCACATTATGGTTTAGATTGATAAATTACTTAT GGCCGCAGCAGGGATTTTATTCAAATATAGGTAGCGTTGTCTAATGCAATGTTGTAAAACTTAGACTCTGTCATGAGTAA AACACTAAAACTTATTGCATTCCATGAATATAACCAGTTTATGAAGTAAACTTTACTTTCAG
CDS sequence (LotjaGi3g1v0290200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACGACGCAAACGGTGGCGCAGTACCTCCACCACCACCGTGCCTCGTATCTATCGCCCCATTCTCCTCCCGCCGGCG CCGCCTCTCCGCCACCTTCGTGCGGCAGAGCCTCCCTGTCTCGCCAGTGGCATGGATATCCCTCCAGGGACGGCTCATCA ACGCCGAAGAAGCCAGCTCGGCGAGAATCATCCGCGGTGGCTTAACCTCCGAACAAGCCCTCGCCTGGGACCTCTTCCCT CCGATCCACCGGTTCCTCATCGTCGCCGTCATAGGCGCCGCCGTCGCTCAGTCGCAGAAAAACCGTCAGATATGGTACCT TCAGAAGTCCGTTGAACTCAGAGACCAGGTGCTATCAAGCATGCAGCAGAAGCTGGACAATCTTTGTGAGCAGGTTAACA CTTCTAAAGAAAACTCACCAGCTGCCATCAAGGATAGTGAACTGAAACTGGATGATGAAGCTTTCGGCACCGAGAAGATT AAGTTTGTTGATTGTGGTTGTTGGCATTGCGAACGGCATTCTCCCTTTTTTAATGAATCCATGGATGCCTCTGCTATGAG AGCCTCCAGTGGAAATGAGGTGCTCCAATATAAGATGCCTTGCAGTAATGAAGAGCAAGAGGAGCGAAGAATGTCCGATT TGTCAGACTTAGCTTCAAGTGTGACATCTGCAGCTGATATCCAGTTGAACAACTTGGCTGTAGAACAAGATATTTATAAT CTTAAGAGAGACTGTGAAGAGAAGAATACGACAATTAAAGAGCTAACCACTCAGCTGAACTATTCTGAAGTTGCTAATAG CAAGAGGGTTACTGAATTAGAAGACATTATACGAAGGAAGAATACAACAATTACTAAATTGAAGAATGATTTGGTGGTTC TTGAACAAAAGGTTGTGCAACTTACAAGACTCCGTAGAGCCTCCTTCTCTGCTAGTACTTCAAATTGCAGCCCACTGCCG CAAATGAGAGATAACCTCGTTTATGATATGGATAGCACCACTAGTCCCTCATCTTCTGATACAGATGGTTCTCCTGCTAA CAAGGCACAAGATCCTCAAGTTGATGTCATTGTCTCGAACCAGGGTTCTGCTTCCGGGATTGATCAGATACCTATGCCAG CAGAAGTCTTCAGTTCTTCAGGCAGAGTCTTTGAACGCCGCTCAAAAACAAAATCGCGATCCATTAGTCCTCTTAAAGAG GTTTCAATGAATCGGAAATCTAATGCTGCTTCTTCTTCTTCAAGTCCAAAGCAATTGTCAGCTCGTGGGGACTTGAAAAA GAGTAGAAGACGATCTCTTAATGGACCTAAGAGTGCAACTGCACTTAAGAGATGGGTACAGTAA
Protein sequence (LotjaGi3g1v0290200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDDANGGAVPPPPPCLVSIAPFSSRRRRLSATFVRQSLPVSPVAWISLQGRLINAEEASSARIIRGGLTSEQALAWDLFP PIHRFLIVAVIGAAVAQSQKNRQIWYLQKSVELRDQVLSSMQQKLDNLCEQVNTSKENSPAAIKDSELKLDDEAFGTEKI KFVDCGCWHCERHSPFFNESMDASAMRASSGNEVLQYKMPCSNEEQEERRMSDLSDLASSVTSAADIQLNNLAVEQDIYN LKRDCEEKNTTIKELTTQLNYSEVANSKRVTELEDIIRRKNTTITKLKNDLVVLEQKVVQLTRLRRASFSASTSNCSPLP QMRDNLVYDMDSTTSPSSSDTDGSPANKAQDPQVDVIVSNQGSASGIDQIPMPAEVFSSSGRVFERRSKTKSRSISPLKE VSMNRKSNAASSSSSPKQLSARGDLKKSRRRSLNGPKSATALKRWVQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 7 | 446 | 440 | 7.2E-155 | – | |
| Coils | 118 | 138 | 21 | - | – | |
| Coils | 238 | 258 | 21 | - | – | |
| Coils | 270 | 304 | 35 | - | – | |
| MobiDBLite | 328 | 350 | 23 | - | – | |
| MobiDBLite | 381 | 447 | 67 | - | – | |
| MobiDBLite | 395 | 421 | 27 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0290200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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