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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0291700 |
| Transcript ID | LotjaGi3g1v0291700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Polyphenol oxidase; TAIR: AT5G38210.1 Protein kinase family protein; Swiss-Prot: sp|Q06215|PPO_VICFA Polyphenol oxidase A1, chloroplastic; TrEMBL-Plants: tr|K7M1M4|K7M1M4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0291700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:59402476..59403348) extracted from Lotus japonicus Gifu genome v1.2.
CTTGCAATGAAAGAAAAAGCACAAGCTACATAGATAGCTAGCTAAAAACATGACATCTATCTTATCATCTCTGTCTTTCG TATCCAACATTAATCACCATTCTTCCCTGCATCCATTATTCTCTCAGAAACACATACTCAAACCAAAACGCCTAGACCAT CACCACCATGTTTCTAGAGTGGCATGTTGCAGCAACAATAGGGGCAACCCGAGCAACACAACACCACCAAACTCCAACGG AGGACACAGGAGGGATGTTCTGATCAGCCTAGGAGGATTGTGTGGTGCCGCCGGTGCCACTCTTATCAACAGCCCTTTTG CCATTGCTGATCCAGTCATTCCAAACTACAAAAACTGCGTTCAAGCAGAAATACCGGACTGTGGAAAGCCTCCCTTTGAT TGCTGTCCTCCTCCCACAAGCACTGACGTCCAACCTTTCCAGCTACCTTCCTATAGCGGAACGCCGCTGCGGGTAAGGCC AGCGGCGCATCTGGTGACTGATGAATATCTTGCCAAATACGAAAGAGCAATTGACTGTTAGAATTTTGGGTCACAAATGT AACTTTTAATTGTGTTAGGGCCATTATTTAATTAGCCAAAACTAAAGTGGTCTATTTAATATTGATCTTATGGCTAAGGG CATATGTGTTATGAAAAGGTATTGTGCAGATACCATAAGGCAATATTCTAATTTGATGAGGGGCCAAATTAGAAATATTG AAAACAGAATTGTAACTGATGCAGTTACTTATAGGGTTGTGGTCCCTAATTGTAGACGCAACACAGTAACGTGAAAAGTT TCTCCTCATCCCCATCAGAGGAAAACATCAGGAAACCCTAAGGGTGATCTACAATTGGAAGATCACAACCCCA
CDS sequence (LotjaGi3g1v0291700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACATCTATCTTATCATCTCTGTCTTTCGTATCCAACATTAATCACCATTCTTCCCTGCATCCATTATTCTCTCAGAA ACACATACTCAAACCAAAACGCCTAGACCATCACCACCATGTTTCTAGAGTGGCATGTTGCAGCAACAATAGGGGCAACC CGAGCAACACAACACCACCAAACTCCAACGGAGGACACAGGAGGGATGTTCTGATCAGCCTAGGAGGATTGTGTGGTGCC GCCGGTGCCACTCTTATCAACAGCCCTTTTGCCATTGCTGATCCAGTCATTCCAAACTACAAAAACTGCGTTCAAGCAGA AATACCGGACTGTGGAAAGCCTCCCTTTGATTGCTGTCCTCCTCCCACAAGCACTGACGTCCAACCTTTCCAGCTACCTT CCTATAGCGGAACGCCGCTGCGGGTAAGGCCAGCGGCGCATCTGGTGACTGATGAATATCTTGCCAAATACGAAAGAGCA ATTGACTGTTAG
Protein sequence (LotjaGi3g1v0291700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTSILSSLSFVSNINHHSSLHPLFSQKHILKPKRLDHHHHVSRVACCSNNRGNPSNTTPPNSNGGHRRDVLISLGGLCGA AGATLINSPFAIADPVIPNYKNCVQAEIPDCGKPPFDCCPPPTSTDVQPFQLPSYSGTPLRVRPAAHLVTDEYLAKYERA IDC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 25 | 162 | 138 | 8.6E-22 | – | |
| PANTHER | 25 | 162 | 138 | 8.6E-22 | – | |
| MobiDBLite | 46 | 64 | 19 | - | – | |
| MobiDBLite | 46 | 66 | 21 | - | – | |
| Gene3D | 95 | 163 | 69 | 6.5E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0291700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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