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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0298700 |
| Transcript ID | LotjaGi3g1v0298700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | AT1G65230-like protein; TAIR: AT1G79510.1 hypothetical protein (DUF2358); Swiss-Prot: sp|O94410|MU163_SCHPO Meiotically up-regulated gene 163 protein; TrEMBL-Plants: tr|A0A151RCV1|A0A151RCV1_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0298700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:62174810..62179342) extracted from Lotus japonicus Gifu genome v1.2.
AGCCACTCACTCACAAGAAGAAACAAGAGCCTCAAATTTTGCTTCAGCTCCAGGAAAGAAAGAAAGAAAGAAAGAAAGAC ACAAATGTGAAACACTCAAAATTCTCAATCTCTCTCTTTCTCTTTCTCTCAATCGATTCAAACTCTAAACCATTGAACAT TGAAAATCAATGGCTTTTCTTCTATCCAACTTCAAACCCTCTCTGCTACCTCAATCCAAATCGATAACCAAAGAGAAACC CATTCGCCAAACGTTATCATCAGCAAAACCCATTTCCCAAAACCCTTCATCTTCCACCTCGTTTTCTCCATTGGAAACGC TCCATAGTGTTTCTGCTCAGGTTGCTCAGGTGAACGCGCCACCAGGTGCTCAAGACAAGCAGCACCACCAGCAGCGTAAG GATGAGTTCTATGTCAATCTTGGTCTTGCTGTCAGGACCCTCCGTGAGGACATGCCTCTGATTTTCGTCAAAGACCTCAA TTATGACATTTACAGGTGAGTTTCTCATCTGGGTATTTTAGGTTTTGTTGTTTTGATGTTTGTTTGTTTATGCATGTGTG TGTTTTTTTTGTTGGAATTAAGGTTTTTTATCTGAGGTGGGAAATTGGGGTTTTTTATGTTGAATTTTGATTGTTTCAGG GATGATGTAACATTCAAGGATCCTTTGAATACGTTTAGTGGTATTGAGAAGTATAAATTGATCTTCTGGGCATTGAGGTT TCATGGTAAAATCTTGTTTCGTGAGATTGCGCTGGATGTGTACAGGGTATGGCAGCCTTCTGAGAATGAGATATTGATCA GGTGGAACCTGAGGGGTGTGCCGCGGGTTCCGTGGGAGGCGAAGGGGGAATTTCAGGGTACGTCGCGGTATAAATTGGAT AGGAAGGGGAAAATCTATGAGCACAAAGTTGATAATTTAGCATTCAATTTTCCACGGAGTATCAAACCGGTGTCAGTTTT GGATTTTGTTACTGCCTGCCCTGCAAGTCCAAATCTAACATTTTTATGGGGTGCCGCCGCGGATTCCAATTCATCTTCAT GGGTAGAGTTTTATCAGGCAGTCAAGGACACATTGGATCAAGAAGGAGAGTTGCTACCGCAAGATGGACTGGCTACTTGT TCATAACAATCTCTTAGTAAATTGTCTCATAGGTGATGTATACTATAGATTATAACAGGTTAGATGTAATGGATTTGGTC AATCATATAAAATGGGTTTTGCTCAATGGTCATCAAGAGTGTATATAGATAGGGAGGGATTCCGAAGCGTTCAATTGCTC ATGCTGATGTTGGTGGAAATAAAGCTTCATATCCTTGTCGAGTTTATACAGGTGAGATAGATCTATATGCTATAATCAGA ATTTATAATTTATAATTATTTTGATTCTTAAAGAATTGAATCTCGTCCTTTTTCTCAAATGATTGTTGAACCATATGGAT GGCACTTGCTTACACAGATCAGTGTTTGTACTTTCTTTCTGACTTGATGTAAGTTGTAATATAGCTTCATTGTACTAAGT TCTATGCATCTAATATATATGTATACACACACAATAGGTTTCAATTTTACATGAAAGCCATCTTATAATGTTTCCTTGAT GAGTAATTTGTTTTTTAAATTTATGTACAAATGGAAGTCAGCATATATTCTATGGTTATTTCCATTTTAATACTTTTCTT TACTTGGTAAACAACAACTCCCTATATATCCCATTGAGACAAATGACAGTCAATAAGTTAACATCAATTTATATGGCAAC CATATAACCTAGGTATCCACTTTTTTTTTGTGACATCTGTTATAATTTGGTTTTTCTCGTCTTACTTGACATATTATCAT CATAACAGAGTGGTTTGTTAGTTTTCATCCAAAAAACATCTCTTAGTTTATATTACATTCTAGGTTTAGGCCACTACCAT TGTTCTTGCCTTTGAAAGATCAACTTGTTTATGGCTGTATAGCCACTTTGCTTGGTAATTCAGATTCTTATAAAATTTGC GGTTTCAGCTAGTAATTGAACTTCTTCCCTTGTATTCGCTGGCAAAAAAAAAAACTGTTGTCTGCATTCTATATTCCTAC ATCCCCCCTGCCAATATTCTTCCTTTTACTATCTGAGATTATTCTGCATGATATTATGCTCAGAAAGAATCTGACATATA TTTGTATGTCTTCTGCTTAAAAAGTGTTCCCTCTTATTTTTATCATGTGTTTTCCGTTATTTCAATGCTCGGAAAGATTA ATGCTAATGGAAGTTATCATGTTCCTTATTCTTACTTCACTTCTTTCTCGAATTTATGTTAGTTTCTTTTAAACTGCTCT CAAAATCTAAGGTTGATAAAATTCCTTATAGATGGGCAATCCTCCCTTTCTTTTCTTTTTTGTCTCTTTTGTTTACAAGT GTTATATGGAATAGGAAATAAATCTAAAGACCAACATCCCCAGATGCAGGTTACTTTGGTGTGTTTATAATTTATCGAAT CCATAACGTCAGCACCATGATTACTAAGAGCTTTAGAAAATTATACGGACCAATCATGCAAGGTACAGAGAATTTACCAG GATCATCTAGCCTAGGAGGAAATCTCTTGTTCATTTTTGATTATAGGGAATGCTTTTATATTTCTTAAACAACCTCTCTA AAAGCTTACTTTGTTTCTTCTCTACATCTTGCTTGGTTATTTCTTGAGGGGAGGCTACAGGTGGAACTAAGGATTTATCT ATATTCTTCTCAAGTTCCTCACCTCATACTTTTTTTACTCACCTCTACTTCGGTTGGTTCATTCTCTATCATATTGCCCT TCACCTCTGATTCACTCTCATCCCCTTCTTCATCCTCTATCATACTGTTTTCTTGGTCCCAACTTGTTCTCTTGGAGACC AAAGAAGCGGACTTTGGTGGCCCGTTCAAATACCGAAACAGTGTATCAAAGTCTAGCTAATATTGCTGCTGAGCTGCTTT GGATCCAATTCCTGTTGCAAGAGCTTTCATATTCAGTTCCAAATCCCAAAAGGTTTATTGTGGTGCCCACTAGGGTGGAC CATTTATATTTTGGTCCACCGGTGGTCCATTTTTTATAACCGTTGGATGAAGGAATCAAGGAATATTCTTAAATTTAATG GCTAGGATTGAATTAGTCTTAGAAGGGTATGATTGTAATACCACCATGAACAAGTTCTCTCTCCCTCAACCTCAATGGAC CCAGAACCACCACCGCCGTGCAACCTTCACAGCGTGGTGGCCACCGCCGTTCTGACCCACTGTCACCACCGGATCTTCTC CCTTCCCCCCTACGACGACAATGCCTTAGTTCTCCCTCCGTTGCATTCTCGAATCTGGGTGTTTTTGTTGGTTTTTTGTG TTGCGTTGTTGATCCACTTTTGCAGTGCTTCTGAGCCACTCTCGGTGGATGGCAAGGTGTTGCCGTGTTGGTGCTCGACG AATCCAACTTCGATTCCGTTATTTCCTCCTTCGATCACATCTTTGTTGAATTTTACGCTCCCTGGTGTGGCCACTGCAAG CGTCTCTCTTCTTCTCAATTCCTCTTATCTAATGCCTGTGCTGTTTTTCAAGTTTCCGTTTTTATTACAAACCCACTTAG AAAACTACCCGGCTACCCCCTTATTTTGGTTGGTTCGTGAATGTGAAGTTCCGTTTTTTTTAATCTGGGTACTCATGTTT CGTTGTTGGGTATGAAAGCATGTCTTGATAATAGTGGATAATGCATCTTGAAAGATTGATTTTTTTAATTTTTTTGTGTG TGTTATGTGGGATATGATTGATGCGCTTTTGTAATTGGCATGTGCAAGATCATCAAGCATAATACACACTTTCTATGGCT CAGATTATGATTTATGAGGATTGGTTGTAAATGTCCCATCACTGATTTTGGCTTTTGCTACTTTCGTTTTTCTGTATCTT AACCAGAGGAGGTTTGTCTAAGATGTTTATGGTTGAGGATGGTGGATTTTGCATCTTGGGGGCATGGCTGGCTGGCTTGC AGGGAAGAAGGAGATGAGGGTGAAATAAAAAGAGGAGGAATGACTAAAATATCCTTGGTGCAAAGTCAAATATGCCCCTG GTGCACCGGTGGACCAAAATATAAATGGTCCACCCTAGTGGGCACCGTTTATTGTGATAACATGAGTACTACAGCTTGAC TCAAAATCCTATTCTAAACACTCAGCACCAAAGCACATGGAACTGAATATCTTCTTTGTTTGCGAGAAGGTCACTTGAAC AAGAGCTTCATTGTTCAACATATTCCCTCCCTGGATCAAAAGGCATACATTTTTGCAAAGGCTCTTTATACCTTGTGATT TACTTCTCTCGGAGACAAATTCAATGTAGTTGACAAATATTCATATGTCAAGCCACCTTGAGTTTGCAGGGGCATGTTAG AGCGTATTGTAGTGATAAAGCATGTGGCTCGGTTGTATGTTAGTTGTATTCCAATAGTTATTGCGCACATACACATCGGT TTTGTTAGAGTTAGTTGAACCAAAGGGACTGACTAACTACTAATGATTTCACG
CDS sequence (LotjaGi3g1v0298700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTTTCTTCTATCCAACTTCAAACCCTCTCTGCTACCTCAATCCAAATCGATAACCAAAGAGAAACCCATTCGCCA AACGTTATCATCAGCAAAACCCATTTCCCAAAACCCTTCATCTTCCACCTCGTTTTCTCCATTGGAAACGCTCCATAGTG TTTCTGCTCAGGTTGCTCAGGTGAACGCGCCACCAGGTGCTCAAGACAAGCAGCACCACCAGCAGCGTAAGGATGAGTTC TATGTCAATCTTGGTCTTGCTGTCAGGACCCTCCGTGAGGACATGCCTCTGATTTTCGTCAAAGACCTCAATTATGACAT TTACAGGGATGATGTAACATTCAAGGATCCTTTGAATACGTTTAGTGGTATTGAGAAGTATAAATTGATCTTCTGGGCAT TGAGGTTTCATGGTAAAATCTTGTTTCGTGAGATTGCGCTGGATGTGTACAGGGTATGGCAGCCTTCTGAGAATGAGATA TTGATCAGGTGGAACCTGAGGGGTGTGCCGCGGGTTCCGTGGGAGGCGAAGGGGGAATTTCAGGGTACGTCGCGGTATAA ATTGGATAGGAAGGGGAAAATCTATGAGCACAAAGTTGATAATTTAGCATTCAATTTTCCACGGAGTATCAAACCGGTGT CAGTTTTGGATTTTGTTACTGCCTGCCCTGCAAGTCCAAATCTAACATTTTTATGGGGTGCCGCCGCGGATTCCAATTCA TCTTCATGGGTAGAGTTTTATCAGGCAGTCAAGGACACATTGGATCAAGAAGGAGAGTTGCTACCGCAAGATGGACTGGC TACTTGTTCATAA
Protein sequence (LotjaGi3g1v0298700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAFLLSNFKPSLLPQSKSITKEKPIRQTLSSAKPISQNPSSSTSFSPLETLHSVSAQVAQVNAPPGAQDKQHHQQRKDEF YVNLGLAVRTLREDMPLIFVKDLNYDIYRDDVTFKDPLNTFSGIEKYKLIFWALRFHGKILFREIALDVYRVWQPSENEI LIRWNLRGVPRVPWEAKGEFQGTSRYKLDRKGKIYEHKVDNLAFNFPRSIKPVSVLDFVTACPASPNLTFLWGAAADSNS SSWVEFYQAVKDTLDQEGELLPQDGLATCS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 261 | 261 | 8.7E-126 | – | |
| PANTHER | 1 | 261 | 261 | 8.7E-126 | ||
| Pfam | 87 | 197 | 111 | 1.1E-38 | ||
| SUPERFAMILY | 103 | 198 | 96 | 6.26E-11 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0298700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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