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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0312700 |
| Transcript ID | LotjaGi3g1v0312700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Microtubule associated family protein; TAIR: AT2G38720.1 microtubule-associated protein 65-5; Swiss-Prot: sp|Q9ZVJ3|MA655_ARATH 65-kDa microtubule-associated protein 5; TrEMBL-Plants: tr|A0A0S3S964|A0A0S3S964_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0312700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:66090359..66097735) extracted from Lotus japonicus Gifu genome v1.2.
GGGGTTCGAGGTTTGGCGCCAAAACCTAAAAGCAGTGTGTTTTGAAAAACGCGATTCTGTTTTGACAAAACTCAAATCAA GGGATTTTGCGTAACTCATCATCATTACTACCAATGAATTTCATCAACGTTCAAAACGCACGCCGTTTCTGATTCATCAT TTCTTCACTCTCTCTGTCTCTGCTAGGGTTTCGTTTCTTCACAACAATGGCGGCCACGCCTCCTTCCTTCTCTCCCTCTC GCACCACCTGCGCTTCTCTCCTCAGCCAATTGCAGGTTCTTCCCCAATTTCCATCCACTTCGCTTCTCCAATTTCCAATT TTTGAATTTGAAATTCAAGTGTTGTTTGTTTTGTTATAGATGATATGGGATGAGATTGGGGAGAGTGATAGTGATCGAGA CAACATGCTTCTTCAACTGGAGCAGGAGTGCCTTGACATTTATCGCAGAAAGGTCGACGCCACGAGGAAGCACAAGGCTG AGTTATGTCAGTGGTTGGCTGATGCTGAAGCTGAACTCATCAATCTTGTTTCTTCCCTTGGGGAGTCTTCCTCGTTCTCG CGGGTAGGTTCGGTCGACATCCCATTTTGCTGCGTTGTTGCTTTCGCTATCGAGACCACAACATCATGCACCGTTTTGCA GTAAAATTTGTGTTAAAAAAATAGCATTATGATGTTGCTTTAATGTAAATCACAACACAATTTTAGTATTTATTCTCACT TTTCCTCATTATTATGGAGGTAGAAGATTGTGTAGTTCATAACTCTTAATAGAATCTATACATTATAGTAATTTCTTGAA GTGAATTTTACAAATGTATTCTATTTTTATTTTTATTTTTATCATATGCTATTGCCTACAATTTTCAAAATTGTATTTAC CATAATAGTATCAGACAGATTCTATTATTAATTATTTTCTTCCAATTCATGCTTGATGAATTCCAACATCTCATGTTTGT GGCTGCATGATTAGCATGTTACTGTTGGAATTAGCTAGATGCCTATTCAACTAATTCAGTTCTGCATTTGAAAGGGGAAG GGCACGCTTAAGCAGCAATTAGCTACCATAAGACCTGTCTTAGAGGACTTGAGGTCAAAGAAGGATGAGAGAGTTAAGGA ATTTTCAAAGATAAAGTCCCAAATTTCTCAGATATGTGTTGAAATAGCTGGCTACGAGCAGCCCAAAAGTTCCTCAGAGG AAGTTGATCAGAGTGATCTGACATTTAAGAAATTGGGCGAACTCAAATCGCATCTCCAGGATCTTCAGAATGAAAAGGTT CTGCCGAATTCAAAATATAGTCATATAATATTGTAAATTCCAGATTTTTAGTTCTTTTTTTTTGCTTAATATTGCTTCCT TTTTCTCTCCAACCAGATCTTGCGCCAGCAGAAAGTGAAAAGTCATATCAGTACTATTAGTGAGCTTTCAGCTGTAATGT CTATTGATTTTTGGAAGACTTTAAGTGAAATTCACCCAAGCTTGGGTGATTCATCAAAAGGTACACCACAGAGCATTAGC AATGACACTCTTGCCAGTCTAACTGGGTATATTCATTCATTAAAGCAGGAGAAGCAACAACGGCTACTCAAGGTGACTTC TGATGATCTAGATAAAATAGTTCGCTTGTACTTATGCTTAGTTTCTTCATGTGTAGTATTTTCCTTACTGTTGCAATTGC AAGTAGTATACATGAATCATCTCAATTGATGTACTGCAAATGATCACTGTAAAAGTTGTGTTGTTAGTTACTGTTTCATT TACCTAAGCTAAATTCTACATTTCTCACATTGAATTTTTTTGCATGACATATTTTTAAAGGGGCAGCCTGAAATATTTGC TCACTTCCCTTTTATTCATAGGAGGTTAACTGTGTTCTGAATTATAATTGCATATATGCTTGCATTTGAAGCTCAAACAC TTCTATACCGAGCAAGATGATGAATTATATCTAAGTTAACATTGGATTGAGATGGAATGGTGGATTTGTATGTGTAGACT AGTGTGTATTAGTCTCAATAAGTGTGTTTTAACTCAAGTTGGTCTAACCAGTCATTACCAACTATTCAACCTTGGTTATA GTTGATCTGGGGCTAAGGACAAAGGATTTGAGCCTATTTTGGTCGTCATATGATATGATCTGTATGTGAAAATTTCTATG TAGTGTTGAAGCTTAAAGCCACAATCTTTACTGTATATGCTTTAAAGTAATCCAAATAGTATTGGTTCAATTTTAATTTT AAGTAGCGGATTGTGTTTTCTAGGATTAAAATTGTATTAATGCCTTGGGTTATGAAGCATGAGCACAAACTGGATGCTGG CCATGACCTGGACACACTAACATGTGCAATACTTAAAAATTAATATTGACTATATATGTATAAATGTATAGCCAAGATTA TCTTCTTTTAGTTCTCATGTTATCACTTAATATGTGCCCCCCATAAATAAACAGACACATGTGTGTATGTATTATGTGGG GTGGGTGGGGGTGTTAGTGTTACAATGATGAACAATGAAGGAGCAATATTTCCAAATGAAATATTATTGAGTCCATTTTT TTAGCATTTTGCATATTTATATTTTCAGTTAACTTTTTCTGAAAGTTATTTAAAAATAAAATGATCTTCTTTAGAAGAGT GGTATGCTTCAAGTTTCAAGCTATATTTTGGGGTCCGTTAAGTGTCAAAGTTGCACGTAAATGCTTTTGTTGTCCTTGCT AGCTAGAACTCCTCATCTAATTGATTGTATTTTAGTCAAAAGTGGATGTGAAAGGTGTTGGCATTGATTGCAGTTCTTTT TTATACATGGTCTCTAATTTTCTTGCAGTTTGTATAAAATAAAATATCAATCTTTAAGAAGTTTTAAGACAGGATGGATG AAAAAAAGCCATACCTTTTTCTTTTCTATACAAATGACATGAGTCTTTTGTGAACGGGATGAGTTTGGATCTTTTTGCAT GGCTTGAGGATGGGATCATGAGGATGATAGTGCATTGTTGTTTTAATACATGTAAACGTCTAAAATCTTAGGTGTAATTG GTCATTGATTGAGCACTTGGTTTCCAATATGTTCTTGAAGATTTATGAATCAATATTTGTTTTCTTGTAGGTACAAGAAC TTACTAAATTCCTGGTTGATCTATGGGATCTTATAGAGACGCCAATTGATGAGCAAAAAGCCTTTAACCATGTTACTAGA TTAATTTCAGCATCAGTTGACGAAGTGTCAACACATGGGTGTCTTTCTTCAGATGTCATTGAGCAGGTTAAACTTTCATC GACTTGAGCGTGCAATTTCACATGCATAATGTGAATTTTAGTTGCTTGATTATGTAAATGTTTTGCAGGTTGAGGCTGAA GTTCAGCGCTTAAATGCTCTGAAGGCCAGTAAAATGAAGGATTTGGTGTTTAAGAGGCAGAATGAACTTGAAGAAATTTA TAGAGGTGTTCACATGGATGTGGATAGTGAAGCTGCTAGACAGATTCTGACCAGCCTTATAGAATCTGGTATATGGCCTA TATCTTTTATTAATGATTTATTGATAGACCCTAAATTGCTATTGATTTTTTTTTTCTTTTGAAATCTATTTGCGAGTGCT TAAAACTAGGATTAAATTCTCTCTAGGATTATTGTAGTAGATGCTTTCATAATGTCTGTTCTTAATTTTTATTTTCCTAT AAACACAAGCTTTTATGGCTTTGCAGGTAATATTGATCTGTCTGATTTGCTTCAAAGCATGGATGATCAAATCAGACAAG CCAAAGAGCAAGCTCAAAGCAGAAGAGAGATCTTAGATAGGGTTGAGAAATGGAGATTTGCAGCTGAGGAGGAAAAGTGG TTAGATGAATATGAAAGGGTAGATATTTCTTTGAGTTTTTTATTTAAATTAATGCCGTTGAAATTTATTGCCATGGAGAA CAATAGATTCCATTTTATATATACAAATATACAAATATTTAGTTCATAAACTTTGTCATTATCTTAGTGTCACCAAAATA CATGCAAATTTATTGGGCATAGCTAGTGACTTTATGTCTCTTTCACTAATTTGACTTAAAAAGTACAATGTCAAACTAGT GATTGTTGTATACTTGTAAGTTGTTAGTTTTTAATTGTTTCTCGGTGATTCAATTGTAGTTTTTTTATTTTTTTATAGTA AACAATTTATGAGCTTTCTCTCAACTACTTCAATTTTTAGGAGAGTTGGTCTTTGACCTGTTATTAAAAGTTTGATCCTT GTGAGTTGCTGCTCCCACTACTCATTTACGCGCACACACACGCCTATGTGTATAGGTTTCTATGTATTATTACTATGTAC ACACACACACACACACACACACACACACACACACATATATCTTTGTATATGTGAGTATGTTTGCTTGCATAGGCTTTAAA ACCCAAAAGTTCTTGTGTTTTGTGGGGGCGTAGGGGATATAAAATAAGTTATGAGCATTTATTTAACAGCTTAAGTTATT AGAGGAGCTTGATCATTGGTATTTGACAGTTTACTAGTATATATTGATAGTATAACGCTATATATTTTCTCTGTTAAAGG AATTTGTTGATTTTGATTGGTTGGTAGTTAAATTTTCTATATTTGGTTGTTCGTGACCTGTGTAAATGTGGTAATGGTAT TTCACATGTCGGTCTATGGTGCTTAAATCTATAAAAGAAATATTGTCTTTGAAGCATTATCTACTTCGGTCAATTCGCAT TATCTTGAATGTTTAAATTTAAATTATTACTGACAATAATACGAAGCTAGGACAAAGTCATTTGTTTATTTTTAACTTTG ATATTAGAATGTAATACATCACCTCTAAACCAGTAAAGTGACATTTATCTTTGAATTATAAAAGAATCTAGATGATCATT CGTGAATACTTTTTGAGAATGTCTCGTTAGCACAAAATTGTTCTTCCACCGGAACTTAACACCTTGAACTTCAACAGTTT TGCCACTTTTTAAGTTGAAATTTATGTCATTTTCAGCAATTACAATGTTTTATGTTCCATTGATCAATAAAAAATGCATA TTTCTGCATTAGTTTGTAGATCTATTTAGAGAAACATACATGAAATATAGTCCTGTTTCCGTCATTTACTCTTTTTCATC CCATTTTTAGGATGAAAATCGATACAGTGCAGTGAGAGGAGCACACAAAAATTTAAAACGTGCAGAGAAAGCTAGGATTG TCGTCAGCAAGATACCATGTAAGTCATGATTTATTTAACTTTTTTTCATTTGTATATGTTCATGATGATCTACAAATTCT TTTGGTCGATGATTATGCATTTATGGGAATGGGAGACCTGCATAAGTTAGTTGCTTCTTATACATGAATCAGAAAGCTAT TAAAATGTTAATGGTATTTAAACCATTATGAACAGTTAGATAAAAGATCAGTGCAAGCTGTGGACAAGCTTGAATGATAA CATCTCTTCTAAATGAATGGGTGTAGTTACCCAATTAAAAAACCAGTCTTCTTATTTTATGTTTGAGAGAGGGAACTCTT TGTTAGGGTTTAGGCCTGTGAATATGTTTTTGTATTCTAATTCTGGTTCAAATCTAAAATTGTTATCAACAAAACTGTGC TATTTGTTTGTGCAATCTCGAGTTTAATAAATATAATATCATATGTAATGGACTGACAATAAAGTTCATTGGAGAAAATT ATGCAAAATATAAAATACTACGGAGCTAAGTTGTAATATTCGTACTGCTAGTTTCTTTAATGGTTTAACGCTAACTATCC TTCAACTTTTGTTTTTACTGAGCAGCTATTGTTGAGAATTTGACTACAAAAGTAAAAGCCTGGGAGTTGGAAAAAGGAAT ACCTTTCTTGTATGAGAAGGTGATGATATATATTTTATGTTTTTGATTATGATATGGGGAAAGATTAGTCAGGTTTCAAC TCAATTACTTTTCAGGCTCCCTTGTTACAAAGCTTAGAGGAATATCATGTACAACGACAGCTGAGAGAAGAAGAGAAGCG AAAATCTCGGGTATGGCCTGCAGTCATAGTATTTATTTTCTTCTAATGTTTACTTTCACTTCTATATCACTGGCAAAAGA AAACTAGACTTATTTGTTCTAAGGCTGTACAAAATGAAAAATGATTTGGTTTTCTTCGTAAGGACGGAACGGAAGGACCT TTGAATTCTTGCAGACCTTGCCATTGGCTTATTGTTAATTGGACTTGAACATTGTAGATATGCATGTGAAATCTCTTCAA TCCTTATGTATGCGGAAATACTCTCCATCTTTCACAAAGGGCTGACAATGTCATTGAGTAAACTGATTATTACTGCCATT TTTATGGTGGTCTTTCTCCATTTATTCCTGCCAAAAAATTATATAAGCAATTTTTTGTTTGTTATGGCTACGCATTACAA TGAATGAAAATGGCATACCGAATATGTAGTTTAAATGTTTTAAAATAAGAAAAGGGACTAGCAGTGCATCCACCATATTT GTTTCAAAGATCACCATCTACCCTATTATTATGTTTACCTTAAGTGACAAAGGTTTAAATTAAGTTTGAAACTTCTATTG GCAGCTGTGATTTTTTTGTTTCATGTTCTGAGAATTCATAGACTAGTGTAGTATTTACACTTTTTGACAAAGTCTTATGG TATTTTTCATCAACCTGGAACTTTTAATCATGAATCTGGTAATTCTGGTACTCTTAACACTAAACAGGAGCAGAAGAGGC TGCAGGAACAACATGCTGTAGAGCAAGAGGCACTTTTTGGTTCCAGGTCTGCAACAAAGAAGCCTCTGGGTCAGAGCACT ACTGCTAACACCATAGTTGGGACACCAAATGGGCGCAGAATGCTTACTCCTTCGAGCCGTTATGGAACCTCCGGTGGAAA GGAACGTAGAGAAAGTGTTCGAGGGAATAACATAATTCCCGTGAACTATGTTGCTCTTCCAAAAGATGATTCTGTTTCTA GAGGCAGTTAGGCTGCCATAAAATTAGACTTGTGTAAATCAGCTTTGTAAATGTGCTCATTCTACAAGCTCTGTTCCTTT ACTGAAACTTTATATTTAGCCTAGTTCGCAACAAAATAGAGGCTGATCTTTCTTTTCTTTTTTTGGTCAAATAGATGCTG ATCTTAACTTGTGGATCGACTGTAAATGAAAGATGACAAGGCCTGTTCTAGGGTTGATATGAAAAATTGTACAAGTGGTC GGCTGATAGAATTAGGAGAAAAATACAACCATTGGTCTTTAATAGCTTCTTTCAACCAAACTATCAGGTGCCATCTATGA TCTATTATTCGAAATTACAATGCTGGAGTAAGGTTCGATGATGATGGTATGAATCAAGTCATAAATTTATATGAAATTTT GAGAGAATCCATTAGGC
CDS sequence (LotjaGi3g1v0312700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGCCACGCCTCCTTCCTTCTCTCCCTCTCGCACCACCTGCGCTTCTCTCCTCAGCCAATTGCAGATGATATGGGA TGAGATTGGGGAGAGTGATAGTGATCGAGACAACATGCTTCTTCAACTGGAGCAGGAGTGCCTTGACATTTATCGCAGAA AGGTCGACGCCACGAGGAAGCACAAGGCTGAGTTATGTCAGTGGTTGGCTGATGCTGAAGCTGAACTCATCAATCTTGTT TCTTCCCTTGGGGAGTCTTCCTCGTTCTCGCGGGGGAAGGGCACGCTTAAGCAGCAATTAGCTACCATAAGACCTGTCTT AGAGGACTTGAGGTCAAAGAAGGATGAGAGAGTTAAGGAATTTTCAAAGATAAAGTCCCAAATTTCTCAGATATGTGTTG AAATAGCTGGCTACGAGCAGCCCAAAAGTTCCTCAGAGGAAGTTGATCAGAGTGATCTGACATTTAAGAAATTGGGCGAA CTCAAATCGCATCTCCAGGATCTTCAGAATGAAAAGATCTTGCGCCAGCAGAAAGTGAAAAGTCATATCAGTACTATTAG TGAGCTTTCAGCTGTAATGTCTATTGATTTTTGGAAGACTTTAAGTGAAATTCACCCAAGCTTGGGTGATTCATCAAAAG GTACACCACAGAGCATTAGCAATGACACTCTTGCCAGTCTAACTGGGTATATTCATTCATTAAAGCAGGAGAAGCAACAA CGGCTACTCAAGGTACAAGAACTTACTAAATTCCTGGTTGATCTATGGGATCTTATAGAGACGCCAATTGATGAGCAAAA AGCCTTTAACCATGTTACTAGATTAATTTCAGCATCAGTTGACGAAGTGTCAACACATGGGTGTCTTTCTTCAGATGTCA TTGAGCAGGTTGAGGCTGAAGTTCAGCGCTTAAATGCTCTGAAGGCCAGTAAAATGAAGGATTTGGTGTTTAAGAGGCAG AATGAACTTGAAGAAATTTATAGAGGTGTTCACATGGATGTGGATAGTGAAGCTGCTAGACAGATTCTGACCAGCCTTAT AGAATCTGGTAATATTGATCTGTCTGATTTGCTTCAAAGCATGGATGATCAAATCAGACAAGCCAAAGAGCAAGCTCAAA GCAGAAGAGAGATCTTAGATAGGGTTGAGAAATGGAGATTTGCAGCTGAGGAGGAAAAGTGGTTAGATGAATATGAAAGG GATGAAAATCGATACAGTGCAGTGAGAGGAGCACACAAAAATTTAAAACGTGCAGAGAAAGCTAGGATTGTCGTCAGCAA GATACCATCTATTGTTGAGAATTTGACTACAAAAGTAAAAGCCTGGGAGTTGGAAAAAGGAATACCTTTCTTGTATGAGA AGGCTCCCTTGTTACAAAGCTTAGAGGAATATCATGTACAACGACAGCTGAGAGAAGAAGAGAAGCGAAAATCTCGGGAG CAGAAGAGGCTGCAGGAACAACATGCTGTAGAGCAAGAGGCACTTTTTGGTTCCAGGTCTGCAACAAAGAAGCCTCTGGG TCAGAGCACTACTGCTAACACCATAGTTGGGACACCAAATGGGCGCAGAATGCTTACTCCTTCGAGCCGTTATGGAACCT CCGGTGGAAAGGAACGTAGAGAAAGTGTTCGAGGGAATAACATAATTCCCGTGAACTATGTTGCTCTTCCAAAAGATGAT TCTGTTTCTAGAGGCAGTTAG
Protein sequence (LotjaGi3g1v0312700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAATPPSFSPSRTTCASLLSQLQMIWDEIGESDSDRDNMLLQLEQECLDIYRRKVDATRKHKAELCQWLADAEAELINLV SSLGESSSFSRGKGTLKQQLATIRPVLEDLRSKKDERVKEFSKIKSQISQICVEIAGYEQPKSSSEEVDQSDLTFKKLGE LKSHLQDLQNEKILRQQKVKSHISTISELSAVMSIDFWKTLSEIHPSLGDSSKGTPQSISNDTLASLTGYIHSLKQEKQQ RLLKVQELTKFLVDLWDLIETPIDEQKAFNHVTRLISASVDEVSTHGCLSSDVIEQVEAEVQRLNALKASKMKDLVFKRQ NELEEIYRGVHMDVDSEAARQILTSLIESGNIDLSDLLQSMDDQIRQAKEQAQSRREILDRVEKWRFAAEEEKWLDEYER DENRYSAVRGAHKNLKRAEKARIVVSKIPSIVENLTTKVKAWELEKGIPFLYEKAPLLQSLEEYHVQRQLREEEKRKSRE QKRLQEQHAVEQEALFGSRSATKKPLGQSTTANTIVGTPNGRRMLTPSSRYGTSGGKERRESVRGNNIIPVNYVALPKDD SVSRGS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 561 | 559 | 1.1E-271 | – | |
| PANTHER | 3 | 561 | 559 | 1.1E-271 | ||
| Pfam | 57 | 530 | 474 | 4.5E-77 | – | |
| Coils | 294 | 314 | 21 | - | – | |
| Coils | 351 | 378 | 28 | - | – | |
| Gene3D | 365 | 498 | 134 | 4.6E-25 | – | |
| Coils | 467 | 490 | 24 | - | – | |
| MobiDBLite | 495 | 545 | 51 | - | – | |
| MobiDBLite | 502 | 533 | 32 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Microtubule cytoskeleton organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins. | ||
| Molecular function | Microtubule binding | Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers. |
Expression pattern of LotjaGi3g1v0312700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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