Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0314500 |
| Transcript ID | LotjaGi3g1v0314500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ATP-binding protein, putative; TAIR: AT2G40070.1 flocculation FLO11-like protein; Swiss-Prot: sp|D7AF63|SFRA_GEOSK NADPH-Fe(3+) oxidoreductase subunit alpha; TrEMBL-Plants: tr|A0A151QZE9|A0A151QZE9_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0314500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:66505044..66509553) extracted from Lotus japonicus Gifu genome v1.2.
CTGAGATATCAAGTGATAAAAAAATTGAAGTTAGCCGGCTAGATCGAGCTCCACATGGCAGTAATTCCTGTTTTGACGCA AACTATATTATACAAATTTCTTTTGTCTTTTGCAGCACCATGCATCTCTCCTGCACAAGAAACAGAATCTACGAAAGTAG ATTAAGGTAGTAGTGTGAGGGTGGAACTGAAGAGGGAGAAGTAACTTAGAGAACATGTCTCGGATGATGAATATGATGCA GGCCAACATCAAAGGGCGCATGAACCAAGAACATGACAGATCAGACGATGATCTCTCCCTTTTCAGGGAACTGAGGAAGC GCCAGAATGATCATGTACCAAGCTTCCTCATCAACGGTGCTGCTTCTGAAGAGTATGAATGTGACACTAATATTGGTGGC AGTGTTGGTATGTACTCATATGACATATATGTATAATCTTTTTATTCCTCTTGGATTGGTCTTAGATTTGGAGTTTCTAT GTGTTGCTTGGTATGAATGAAGGATATGAGAATGAGAAGGAAGAAGGTCTTGCATGCGAAATTGTTATATATATGCCTTC TTCTTGGTGTTTGATGTTTTGTCCAATTGAAGATCAAAAACAGGGGAATTGAAAAATGAGAAACTTACCTAGTTTCCCTC AATTCAATTTGTCCATAGTGTAGGAAAACTAGGATATTTTATCACAGTACTCTATAGTTACTGAATTTGCAATTTTTGTT CCATCTTTTATCCTTAAATGGAAAACAATTTGTAGAAATTCATATAGTGTATTTACGAACAGAGCAGACACCCAGATTGA GAAATGAAGATCAGATAAAGAAGTAATGAATATGATATATGATGAATGTGATAAGACTAATAAAGAGGGAAATTCGATGT TTTTCTACATGGTTTGATTGTCTAAGTATCGTTGTTACTGCTTTTCATATTGAACCTAGATTTTTGCATAGGGTTAGTGT TTAACGGAGGAAAAATATTATTGCAGGAAAGTTTTCACTCTATAGAATTCATTCGGGGAAGAAAGAACATGGAGAGTTTA TGGAAACAAACAAAAATGACTATGATTGGTAAGTTGTATATATGCATTCTACAAATTGAATGATTATTTGTATGCTTTCT CAAACAAAGAAAAATAAATTCAACACATTGCATGTGAAATAAAGGTTGAAAACACCACCAGCAACTCCTCTGTTTCCATC CCTTGAAATGGAGCCCAATGCTCATCTAGTAACTCAGAAAGAGATACCAATCTCTCAGCCTATCTCAAGAGTACGTCACT GAACTCAATATTAATAACCAAATAATGATGTGAATTTATTTTTAGTTGGACTTTTTTGCTTTCATCATTTGGATTAAGGT ATTCAACTCTAAAGATCACTCTTCTTTGACTCCCTGAAATTTGCAAAAGGTATTAAACTTGATTCCTGAACTTAATATGC ATTCTGTTTTCCAAATTTTATTTTGCTTTTGCACTAAACTTTTCATTAGCTGTTTCACAACATGTATCCTCCACAAGTTT TTCATTATTTGAAAGAACTATTAAGAGATGCAACAATCTATTTACCATAAATATTCCCAATTCTCACATTTTAGATGGAG TTTTCACCCAGCCCATTTTCCCCCTCCAATGTACTTCATGTCTTTATTTAACATGGGACGAGTCTAGGGTCCCCCGGAAA GTTTCTATTCATCAAGACAAATTGTTTTTTATTTTATGATGATTTTCTCAATTCTGTACTTTCTGGATTTTGTTAGAAAA AAACATACATTAACTTAGTTGGACAACCTTCTGAGTTCTAAAGCCCAAACTGATATCACAAAGGTTCATTTTGACCTCAG CTTGCAAAGAGTGACATGGAAGTACTAAAACCCAAGTCAAGTGATGGAAGAGCAAAACATGCTAACTCAACTAAGGCAAA ACTTCCAATGAGATCAATAACACCAAGCCATAACAAACAGAGACCAAGCATCCTTAAGAAAACAAATGCAATAAAATCAG ACACTCCCCCAACCACCACTAACCAGAACAGTTATGCCAAAATACATGATGCTGCCTGCAACACTAAATCCACCCCCCAA AAGCAAACCAACAATGCCGATTTCCTTGCTTTGAATCTTAAGAAAAGCATAGAAACAAATGAATCACAGAATAAGCCTAG AACTAGAGGTGTTTCCCCATCAGTGAAGTCAAGGGCTGAAGGTGTTAAGATGGTAGAACTCTCAAATGGGGCACCACCAA ATCTAAGGACAGAGCAGAGGCCAAGCTCAACTACACGAGGAAGAAGTACTACTAGAGCATCTACAGTTGGAGGGTTTCAG AAACCGGATCCTACCCCGAAAGCATGTAGACCATCAAGGTCACCATCACCAAGCATGTCTCATGGTGGTTGGAACCAGTT AGACAGGACCCAGAAAAATATGAGGCAGCAAAAGGAAATATTTACCTTAGCATCCGGCAATAATGAAAGTAAATCACATT TTAAGGGAAGTAAAATGGTGGAGAAAATGATGAATGCAAGAAAATCAAGTATCAATCAAGCAGACAAAGAAACAAAAGCA AAGCCTGTCAAATACGGGGTAAGATTAATCCTCATTCTCCTTTCATTTTGCCAAGTCCAGTTACAGGAAACACATACTAC TTTGCATCTGCTATAAAGGGGTCAAACAGTTTATTGCATGTTTCAACCAGTTTCTCTTTCATTATAATCAATTTTGAAAC TTAGAAGCTATTCGTAAAAGCTTCTCCATATAATTGATTCTGACTTTAGAATCAATTGTAGAATGGTTTCCAAAGATCCT GTTACTCACTTCTATTTCTGTTTAAACCAAACTCTAATTCATTTAATTTATCTGTTGCTTCAAGTGATGGGACAGGAAAA TTAAGAGAAGAACACATTACACAAGGATGTTCCAGCAATGTTGAGATTCGTTATGCGGCTTTACATGTCTTGCACACTAA AGAAAAATGACCAAAAAATAAAGCCATGAGAATAGTGCTAAGGGATTTTTGAAAATATGCAGAAGATTGTAGCTTAAAAA TGTCTGTTGATGCAACAATGTCAGAGATCAAGAAATAACTTATTTAGACATGTTTCGGAAAACTTGATTTGATTTAGACT AGCTCATATTTTGTAAAAATGTCCGTATGTTATTTTACCACGTTCATCATGGATGAAAAGTTACATCAATCTTAATTAAC TGGCATAGTTTCGTAATTATCAAAATTCACAACATAGTTTCTCAGAGTTATCTGAAATTTGTTTGTTTTCTTGTCTAATT TTCCGATGGAACAAAAAAAAAGAGTTATCTGAAATTTAAAAAGATTACTGATACATGTTTAAGGGCTCTGTTTCTTACAT CCCTGGTGGCTGGTGCAAAAATTAATGCTCTACATTTGCCTCATACTTGATGCTTTGGATTGTTGTTAAAATTGTCATCT TAGCGAAATCATTGAAGTTACATATATACTTCTGTTCTGGCAAGAATTTCCGGGACAGGACCTTGAAAGGGTTCCATATA ATAATAAGATGAAGTGCTCGACCGAGGGATGAAACCTCGAAAGGGTTCCATAGAAATGGTACTCCTAGTTTCGGCCGGGT ATGCAGATTTTATCCGGAATTTCCTCGGCATATTATGCCAGGGGCTATTTCCCTTTCCTCAGCTACTTCTACAACGGCTC TAGAGCTAGTTCCTACACTACGACTAGTCTGTCCCTTCGACTATTCGAAGTAGCTGTTACAATTCTCGGATGCCAACAAC ATGAAATCAAAATACTTCATAATGTCAATCACATTATTATTTCTGCTACAGAGACTACACTACTGCTGCTCAATCGGCTA AAGTAATATTTCTGCTAAAAAGATACGAGGTTTTTCTTATTCATTGTTTGTATAGAAATCTCAGCCACTTTCTTGTTTGG ATATTATTTAAAGAATTGCTCCCTAGTTGGTTAATATGCTATGTTGGATGGACTGTTATGTTTTTACTGATGTAAATTCC CTCCCCTCTCAGTTTTTTATTTTCTTTTTCTCTCCTTCCTTCTTTTGTATTAAGGGTTTGGGGCACCCTTGTGTCCCCTT TTTAATACAATTCATTGGTTTATCAAAAAAAAATCCATGAAGAGAGTAACCGATGAAAAAAAATAATGTTTTGGGCGTTA ACTGAGTAAAGAACACAGCAATTTGATCATGTCATGCCTTGCAGCAATATTTAGCGTCACTTAATAGATACTATCCAGAT ATCAAATAATAATCTTCAACAGTTCCACCATAGAAACCACAATCAGAAGAAGAAACCATGTACCTTACAAGCATACAAGT GCAAAAGAATAGCTTCCCTGCCTTCTATGGAATAACTAAGCTGAACAATGGTAGAGCCAAACAGTACAACTTGAGGTCTC AATGTTTTAGTTCCAAATAAGCTTTAATATTAATGGTGAAAGTTTTGGTCCATCTAACCAACTATAATAAACCAGTGTTG TCCAGTCTAAAAATCAAAATCTCTCCAAAC
CDS sequence (LotjaGi3g1v0314500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTCGGATGATGAATATGATGCAGGCCAACATCAAAGGGCGCATGAACCAAGAACATGACAGATCAGACGATGATCT CTCCCTTTTCAGGGAACTGAGGAAGCGCCAGAATGATCATGTACCAAGCTTCCTCATCAACGGTGCTGCTTCTGAAGAGT ATGAATGTGACACTAATATTGGTGGCAGTGTTGGAAAGTTTTCACTCTATAGAATTCATTCGGGGAAGAAAGAACATGGA GAGTTTATGGAAACAAACAAAAATGACTATGATTGGTTGAAAACACCACCAGCAACTCCTCTGTTTCCATCCCTTGAAAT GGAGCCCAATGCTCATCTAGTAACTCAGAAAGAGATACCAATCTCTCAGCCTATCTCAAGACTTGCAAAGAGTGACATGG AAGTACTAAAACCCAAGTCAAGTGATGGAAGAGCAAAACATGCTAACTCAACTAAGGCAAAACTTCCAATGAGATCAATA ACACCAAGCCATAACAAACAGAGACCAAGCATCCTTAAGAAAACAAATGCAATAAAATCAGACACTCCCCCAACCACCAC TAACCAGAACAGTTATGCCAAAATACATGATGCTGCCTGCAACACTAAATCCACCCCCCAAAAGCAAACCAACAATGCCG ATTTCCTTGCTTTGAATCTTAAGAAAAGCATAGAAACAAATGAATCACAGAATAAGCCTAGAACTAGAGGTGTTTCCCCA TCAGTGAAGTCAAGGGCTGAAGGTGTTAAGATGGTAGAACTCTCAAATGGGGCACCACCAAATCTAAGGACAGAGCAGAG GCCAAGCTCAACTACACGAGGAAGAAGTACTACTAGAGCATCTACAGTTGGAGGGTTTCAGAAACCGGATCCTACCCCGA AAGCATGTAGACCATCAAGGTCACCATCACCAAGCATGTCTCATGGTGGTTGGAACCAGTTAGACAGGACCCAGAAAAAT ATGAGGCAGCAAAAGGAAATATTTACCTTAGCATCCGGCAATAATGAAAGTAAATCACATTTTAAGGGAAGTAAAATGGT GGAGAAAATGATGAATGCAAGAAAATCAAGTATCAATCAAGCAGACAAAGAAACAAAAGCAAAGCCTGTCAAATACGGGT GA
Protein sequence (LotjaGi3g1v0314500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSRMMNMMQANIKGRMNQEHDRSDDDLSLFRELRKRQNDHVPSFLINGAASEEYECDTNIGGSVGKFSLYRIHSGKKEHG EFMETNKNDYDWLKTPPATPLFPSLEMEPNAHLVTQKEIPISQPISRLAKSDMEVLKPKSSDGRAKHANSTKAKLPMRSI TPSHNKQRPSILKKTNAIKSDTPPTTTNQNSYAKIHDAACNTKSTPQKQTNNADFLALNLKKSIETNESQNKPRTRGVSP SVKSRAEGVKMVELSNGAPPNLRTEQRPSSTTRGRSTTRASTVGGFQKPDPTPKACRPSRSPSPSMSHGGWNQLDRTQKN MRQQKEIFTLASGNNESKSHFKGSKMVEKMMNARKSSINQADKETKAKPVKYG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 13 | 366 | 354 | 2.0E-90 | – | |
| PANTHER | 13 | 366 | 354 | 2.0E-90 | – | |
| MobiDBLite | 136 | 191 | 56 | - | – | |
| MobiDBLite | 154 | 191 | 38 | - | – | |
| MobiDBLite | 224 | 238 | 15 | - | – | |
| MobiDBLite | 224 | 343 | 120 | - | – | |
| MobiDBLite | 259 | 285 | 27 | - | – | |
| MobiDBLite | 299 | 340 | 42 | - | – | |
| MobiDBLite | 354 | 373 | 20 | - | – | |
| MobiDBLite | 359 | 373 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0314500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…