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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0322200 |
| Transcript ID | LotjaGi3g1v0322200.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Major allergen Bet v 1; TAIR: AT5G45860.1 PYR1-like 11; Swiss-Prot: sp|G7J032|PHBP_MEDTR Phytohormone-binding protein; TrEMBL-Plants: tr|I1KE09|I1KE09_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0322200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:68623010..68628638) extracted from Lotus japonicus Gifu genome v1.2.
AGAAAATAAAAAAACAATATTAAAGCTTATAGGACAATGATGCACTTTTGTCTTTTCCTCAAGCCTTTGAAATGGATGAT TCTCTAATCTCTCACACTACAATATATTTCAACATCTTACTACTTTGTGAAAGCACATATTGAAGAGCATGATAAAGGAG TTCAACACCCAAACAAGAGTCAGTGTGGGGTTGGAAACCCTCTGGACTGTTCTGTCCAAGGATTTCATTTTCATATCTCC AAAAGTTCTCCCAACTATTGTGAAAGATGTGCAAGTGATTGAAGGCGATGGAGGAGTTGATACAATCCTCATCTTTAACT TTTTTCCTGGTGAGTATTGCTTCTCTCTCGGGAGGATGTTTGGGAGGAAAAAGGAAATAACTTTTGGTACTTGTATTCAA TAAGTTATTTGTCTTATTGTAAAAGTTTCTTAAAGAGTTGTTAGATGAAACTTTGTCAAATTTTAAATAATTTTGTGAGG GAGAAGTAGATGAGCACTTTCCTCTACAAGAAGGGTCGTTATTACAATTTATATAATCTTTTAGGGCGTGCTTGTAAGTT TTTATAGGGTTGGAGTGTGAAAAACGTGAGGGGAAGGAAATGGGAGAGCAACAGAGGAGGAAGTTGGTTAATTCATTTTT TTGTATATATAGGAGTTCCAAATTTTCTATAACTCCAAACAAGGAGATGACTTCTTAAATTTTAGAAAAAATTAGTCTCT TTTCCCTTCTAATTCTAAACATTCTTTTTATGTTTTTTGTCAAGCCTATTGAAAACCACAATAGACAAATTAATTTGAAA TTAAGAAAGTTATTTTAATTGGCGAATTAGATTTTTCTTGATCGATACATGATAGGGAAAATTAACGTTAAGTTATGTTA TATTAGGAGGCAAATAAACCATGTTAAAAATTAGTTCATTCATGAACTATATTTTTATATCTGACATTCGTGATAAATTA CTTACGATATAACTTTTTTTTTTTGCGCTAAAACTTGTTTGTAAAGAAGTCATTTAATTTTAACTTGTGAACCAAGTTTT TTAATTACAGTAAGACAAAGCTTATATTATGTACAGATTTTCATGTTTTTTTTAATATTACCCACTTAATCAAATTCCTC TTGGGAATGAATATATATATCAGGTGTATCCCCACTAGGTTTCCAGAGGGAAAGGATCACAGAGTTTGATGAGGTTTCCC ATGAAATTGGGCTGCAAGTGATTGAAGGGGGCTATCTGAGTCAAGGTTTGTCATACTACAAAACAACTTTCCAACTATCT TCAATAGAGGAGCTTGAAACTTTGGTCAACGTGAAGATCTCTTATGATCATGAATCTGATGAGATAGATGAAAATGTTAA GCCGACGAAGACATCACAGTCAACTTTGATGTATCTTAAGCGCCTTGAAAACTATCTGCAGAATGAAGCTTGAAAGGTCG ATTTATAATATTGTCATACATATCCATTAACTATGTGAGGCCAGTTATTCTATCTTTCGTTTTGTTGCAGAAATAAAAAT AATAAACTGGTATCTGAATAGATTGACCAGCTTCTCTTCACAAAAGTGCAAGTGTTAGTGTGTGTGAGTGAGTATTTGTT TTTTTGGCATTAGAATATGTGCCGGTCGATTTTGTGGAGGGAGCAAATGGAAACACAAACAGTGTTGACAAACCGGCCTT ATAATCTTCCATTGCTTGGATCATCTTGACTTCTCTCCTACACTAAAAACCAAAGAGTTAGAAATGCTAAAACTAACATA TTTAAGACAGGTGTCCTCATTTGGAGACAATCCTGTTCGAGTCGGGAACATTCAAATCATGGTGGGGCTAACTCTCCCAG CGAGGGTTTTTTCCATACACAAGACTCGAACCTGAGACCTTGCTTAAGGGGAATCAAGCATGTACCACTCTAACTACTTT CTAAATTAACCCGTTGAGGAATAATTTTTAAAGATAATTTATACATTTAGAACATAAGTTCCCAAATTAGTATAGAAAGT CAGGTAAATTGGCACTTATCAGTAGCATCTGCATCAGCTAGAAAGAAAAGCATAAAATCATGTAAAATAAAACGTGTATA TATCCACATGCAACCCAAGAGAGGACGTGAACTAGACTTTCCAAACCCCGGGGCAAAAACAAAAGAGCATGTTGAATGGT CTTCTGCTCCGATGAACAAGTGGGACAAGAAAGACCATCTATGATGCCACGTCGGAATAGGGCAGCACACTCAGGAAGGA GACCTAGGACCACCCTCCACCCAGTCTCCTTGCAGCGAGGGATCGCAGAGGATTTCCAAAACTTGTTTTAAAGATGCTTG GGTAGCGATGGAGAAGCCACATAATGGGATAAAGACCTCCGGATGAAAGAGTAACCCAACATCGTGGTATAAATGCCATC AAGAAGAAGAAGAAGAAGAATAAGAAGCCACTAAATGGGGTAAAGACCTCTGGATGAAAGAGCAACCCAACCTCATGGTA TAAACGTTGTCAGTGGTAAATGGCCAACAAAATACACCCTCTTGGTCCTGCAACGACAAATGAATGGACAAGATAATCTT GGCTATAGGTTGCTAGAAAACATGTTCAACCAAAGATCTGTTCCACACAAGAGAGTTAGATAAAAACAAAGCAAAAGCAA AAGTAATTCTCAACTCATCCTCAACCTCATCCCGATAAAGAAGAGGCATAGGGGAAGCCAATTATGATCCCCAAGCCTTA ATTTTTTTTCCATTACCAACACTCCACAAAACCCCCTTTTCAAAACACCCACCTTGAGCGAAGGATACTAATCCAAATAT AGAGGTATAGGGAAAGTACACCGCTTTGAAAAAACGAACCAAGAGAGACTCATGTTGAGACTTGATCCTCCACCAAGTTT TTTCCAACAAAGGTCATATTCAAAGCTTTAATGTCATGAAAACCAAGCCCCCTCTCCCTTTGAATAACACAACCGATCCT ACTTAGCCCAATGTAATCATTTGTTTGATAAACCACCCCAAATAAAAAATGGCTAATCAAGTCGTTAGCTACTTGACAGT TTCAAATTATTAGCAGGCAAATCCACCGATATTCACCGCGAGCGATCTCTTCCTATTTTGGGCGATCTCAAACTTTCATG TATATTAGCTTTCCTTTTCTCGTGATGCATATATTTTTCAGAGTCTTGGCGACCTCACCCCCTTTTGGACGGATTATGTA TGTATGAACTATTTTCTAGGAATGCCCAAAATTATTTTGAAAACGAATCTCGACTAATGACTAATTTTGTTATGTGGCCA CATTTTGAAAACACTTGATCCAATGTGCGATATCTGAGACTCCGTCCAACTAAAGTCAAGTAATATCGAATTTTGACGGT CATCATAACATTTAATGGTATAGGACCTTCCATGGTTACAATCATCACTAACTCTGTCGACTAGTCATTAGTGTGGAGTG TTGCAAGAAAATAGCATGCCAATGCGTTCTAACAGCCAAACTGCTATTTTCTTTGTCGGTCCTACCGATTTCTCTCAAAT GCCTTAAAGCCAAAGAAATTGTATGGTTCTTAAAACCATTATGCCTTAGCTCCAATCTAGTGTCAACCATCGCCATAGTG GTCCCAACAACACTGAACTCAAAATTATAATTGTGCCTCAGCTCCAATCTAGCGTCGACCACCGGCATAATGGTCCCAAC GACGCCGAGCTCAAAATATCATTATGCCTCGAATTCTAATGTCGACTACAGACATGATGGTCCAACAACATGAGTTCCAA TATGCCTCAGGCTCCCAACTAGTGTCAACCACGGACATGGTGGTCCAAAACCACCGAGTCCCTATATTATAAAATTATGG TCAACAAATTTATTATTATTACCATAAAATTAATTTCATTCTAAGCTACTACCATAAAATGTTATGGAATAATAATAAAT GAATTTAATAATATCATAATACCAAATAATGTATTTTCTGATTTTTATAGATACCAAGTTATAAAATATTTTTTCTGAAC AAATACGTCGTTTGAAAATTCATCATTAAACATGAATTTGAAATAATCTTATCTCTTTGTTGACCATTTCTTAACAAATG GTAATAATCTAAATTTCATTATAAACTACCATAAAATATTATGTAATATAAATAAATAATTTTAATACCATCATAATGCC AAATAATTAATTTTCTAATTTTGTAAAATACCATTTTCTATTGTATTAATATCCAATTAATTTGGTCCACATATATATTT ATATTTTGGTCAAATTTTCCCTCAATATATGAAATTTAAACATTTTCTTTTTTTTTGTTGTTTTTATGAGTGGGCCAATA CGCCCAGACCATCTATAAAAGAGGGGTTTTATCAAGTCACGTGATTCTCTAATCTCTCACACTACAATATATTTCAACAT CTTGCTACTTTGTGAAAGCACATATTGAAGAGCCATGATAAAGGAGTTCAACACCCAAACAAGAGTCAGTGTGGGGTTGG AAACCCTCTGGACTGTTCTGTCCAAGGATTTCGTTTTCATATCTCCAAAAGTTCTCCCAACTATTGTGAAAGATGTGCAA GTGATTGAAGGCGATGGAGGAGTTGATACAATCCTCATCTTTAACTTTTTTCCTGGTGAGTATTGCTTCTCTTTGGGGAG GATGTTTGGGAGGAAAAAGGAAATAACTTTTAGTACTTGTATATAGTACATATTCAATTCAATAAGTTATTTGTCTTATT GTAAAAGTTTCTTAAAAAGTTGTGAGATTAAACTTTATCAAATTTTAAATAATTCCTCTAAAAAAGGGTCGTTATTACAA TTTATATAATCTTTTAGGGAACTTGAGGGGAAGGAAAGGGGAGAGCAAGAGAGGAGGAAGTTGGTTAATTCGTTTTTTTG TATATATAGGAGTTCCAAATTTTCTAAAACTCCAAACAAGGAGATGACTTCTTAAATTTTTGAAAAAAAGTTAGTCTCTT TTTCCCTTTTAATTCTAAACATTTTCTTTATGTTTTTTGTCAAGCCGATTGAAAACCACAATAGACAAATTAAGTAAACT ATGTTAAAAACTAGTTCACCCATGAACTATATTTTTATATCTAACATTCGTGATAAATTACTTACGATATAATTGTTTCT TTTGTGCTAAAACTTGTTTGTAAAGAAGTCATTTAATTTTACTTGTGAATCAAGTTTTTCTTGATTACAGTATGACAAAG CTTATATTATGTACACATTTTCATGTTCTTTTTTAATATTACCCACTTAATCAAATTCATCTTGGAAATGAATATATATA TATATATATATATATATATATATATATCAATCAGGTGTATCCCCACTAGGTTTCCAGAGGGAAAGGATCACAGAGTTTGA TGAGATTTCCCATGAAATTGGGCTGCAAGTGATTGAAGGGGGCTATCTGAGTCAAGGTTTGTCATACTACAAAACAACTT TCCAACTATCTTCAATAGGGGAGCTTGAAACTTTGGTCAATGTGAAGATCTCTTATGATCATGAATCTGATGAGATAGAT GAAAAGGTTAAGCCGACGAAGACATCACAATCCACTTTAATGTATCTTAAGCGCCTAGAAAACTATCTGCAGAATGAAGC TTGAAAGGTCGATTTATAATATTGTCATA
CDS sequence (LotjaGi3g1v0322200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATAAAGGAGTTCAACACCCAAACAAGAGTCAGTGTGGGGTTGGAAACCCTCTGGACTGTTCTGTCCAAGGATTTCAT TTTCATATCTCCAAAAGTTCTCCCAACTATTGTGAAAGATGTGCAAGTGATTGAAGGCGATGGAGGAGTTGATACAATCC TCATCTTTAACTTTTTTCCTGGTGTATCCCCACTAGGTTTCCAGAGGGAAAGGATCACAGAGTTTGATGAGGTTTCCCAT GAAATTGGGCTGCAAGTGATTGAAGGGGGCTATCTGAGTCAAGGTTTGTCATACTACAAAACAACTTTCCAACTATCTTC AATAGAGGAGCTTGAAACTTTGGTCAACGTGAAGATCTCTTATGATCATGAATCTGATGAGATAGATGAAAATGTTAAGC CGACGAAGACATCACAGTCAACTTTGATGTATCTTAAGCGCCTTGAAAACTATCTGCAGAATGAAGCTTGA
Protein sequence (LotjaGi3g1v0322200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIKEFNTQTRVSVGLETLWTVLSKDFIFISPKVLPTIVKDVQVIEGDGGVDTILIFNFFPGVSPLGFQRERITEFDEVSH EIGLQVIEGGYLSQGLSYYKTTFQLSSIEELETLVNVKISYDHESDEIDENVKPTKTSQSTLMYLKRLENYLQNEA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 155 | 155 | 1.1E-65 | – | |
| PANTHER | 1 | 155 | 155 | 1.1E-65 | – | |
| Gene3D | 1 | 156 | 156 | 3.2E-39 | ||
| CDD | 3 | 152 | 150 | 2.74973E-33 | – | |
| SUPERFAMILY | 5 | 153 | 149 | 1.34E-24 | – | |
| Pfam | 31 | 154 | 124 | 1.8E-9 | ||
| Coils | 145 | 156 | 12 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Defense response | Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack. |
Expression pattern of LotjaGi3g1v0322200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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