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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0322500 |
| Transcript ID | LotjaGi3g1v0322500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ultrapetala; TAIR: AT2G20825.1 Developmental regulator, ULTRAPETALA; Swiss-Prot: sp|Q8S8I2|ULT2_ARATH Protein ULTRAPETALA 2; TrEMBL-Plants: tr|A0A0B2P7Q5|A0A0B2P7Q5_GLYSO Protein ULTRAPETALA 2; Found in the gene: LotjaGi3g1v0322500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:68752375..68754476) extracted from Lotus japonicus Gifu genome v1.2.
GTGAGAAGGGAAAGGATCAAGACTAGAGATAGAGGAGGAAATTGAGAAAATGACACAAGGTAAGTTCAGTGTTATTTTAA TTCTTAAAATCTATAATTTTTGCATGGATTTGGATAAGGTTACTGCATGTGAATTATTGATGCTGAAATTGACTAAAGCT AGCATTAGTTGTTAATTGCTTTTCTGTTTTTTAGATTTTAAGTTGGTTGTTGTTTTTCCATTGAATTTGCATGAGGTTTT TTGATTTTAGAGGTGGATGAGATAGGGAACCTTTGGGTTTGAATCTCTGGGTTATGAGAATGGTAGATGCACCAAGGGTG CTGTAATTTTAGTGTCATGCTGTAGTGGTTTTAAGTTCAGTTCCATTGGCAGTTCGATCGTGTTGCTTGTTACTGTTGGG AACCTGGGTTTATTAGAATAGGAAAATTTTGTTATATTGGATTGCTTGTTCTTCTAGTAATGTTATTTTCTTTGGCCTTT CAGAAAACAAAGGTTGTGTGATTTTAGGGTTTCACCTTTTCCCAAATCTCTCAGGTCTCACTTTAATTTGATACTTCTGT AGTAGTGTGTAAAAGCTCTCAACTGTTGCAACTTCTTCATGCCTTTCGCACAAATCAAATAATTTTTTGGTCACAAATAT CTTAGGCATAAATGATCGATCAAGAATAATACCTCCTAGGAAAGCCTTCTACGATGATGTGTTTTTAGTACTCCCAAATT TAATTAGGCCTCTTTATTAACATATCTTTGCTATTCTTCAATTTATTTCTCATGTGTCATGAGTGTGATGTTGTCGATAC CAACATTCAGCATTTTCACGCCTCAAAGTATTTCATCTACATTTAAATTTTTTATTGTGTAATTGTAACCAATTATCTGC ACCAATTTACGAGCTTAATTTAAGTAATTTCATTTTGTCTATATAATTCTTAATTGGATTGGAGTTGTTTTGGTGTTGGA ATGGAATACACAGGAACATTGAAACGAAGTAAACATCTTGTGTTGCAAGATGATGGTGGTTATGTGATAAATTTCAATGA AGAAGAGCTCAAAACCATCCAAGACTTCAAGAGAGGAAATGACTATATTGAAGTTTATTGTGGCACTACAAACAAAAAAT ACGGAGATTTTGCTGGGAGGCTAAGAATCAATGGGAAAGGCCAATTTCTCATCACTTGTCAGTGTTGCTCTGAGTGTACT CTAGGTAAGTTCTTTACTTTGATCTTTTCAATTTGAAACAAATTCAATTAATATCTCATTCATCGTTTTACATAGTAAAC AATAGTTCAGGAACAAGATGCATTATTTGAGAGTATTGCTATCATTTTTCTTAAATAATTAAGATAAAAAATCATTGATG TTTTGATTAGTTTCAAGTGAGAACACTAAAGTTTCCATAAATTTTTTTATTTGTAAAAAAATAGAGAATTTGACTCCAGA AGAATTTGAGAAACATGCTGGAAAAGAAGGGGGTGGAAAATGGAAAAACAACATCTGGGTTCATGAGGAAAAAGAGGACA GAGTTCCAATTTCAAAGACACCTTTGTTACAATATTACACACATCAAGCAAACGTGTCTAACTGGATAGATTCTGTGAAC CGGAAGCGAAACTTTCACAGGGATGAATTCATTTGCTGTTCAAGCTGCAACAAGAGGCGCAAGTTTCGTCTCAACTGCAG GGACGAAATCCGCATCTACCATGCTGCTATGAACAACAAAATGTGGAGTTGTTCTGATTGGCCTTATCAGAAGTAAGTTC CTCTCAATTCACAAAGCTTACAAATATTAAAGTTTTTGATATAGTATTTAGATTTTATCCTAAAGTTTCTAATTTCCATG TTTTTTAGAATAACTTGTGATCATGAAGAAGAGAGATCAAGTGTTAGGAGTTGCAGGGTTTGTCCTCGCTATTCATTATG CGAAGGTTGCTCATCTTGTTACTGTGGAGGTTGCATCAAGTGTCGCTTTGAGGATTGCGATTGTCAAGAATGTAGAGACT TCATGCTATTTGCAGAACCCTAGAGTACTCTAATTAAACTATAGTTATGGCTTTAGAGTGATAAACCATATAAATCAAAA CTTGAGAAATGCTATAAAGACT
CDS sequence (LotjaGi3g1v0322500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACACAAGGAACATTGAAACGAAGTAAACATCTTGTGTTGCAAGATGATGGTGGTTATGTGATAAATTTCAATGAAGA AGAGCTCAAAACCATCCAAGACTTCAAGAGAGGAAATGACTATATTGAAGTTTATTGTGGCACTACAAACAAAAAATACG GAGATTTTGCTGGGAGGCTAAGAATCAATGGGAAAGGCCAATTTCTCATCACTTGTCAGTGTTGCTCTGAGTGTACTCTA GAGAATTTGACTCCAGAAGAATTTGAGAAACATGCTGGAAAAGAAGGGGGTGGAAAATGGAAAAACAACATCTGGGTTCA TGAGGAAAAAGAGGACAGAGTTCCAATTTCAAAGACACCTTTGTTACAATATTACACACATCAAGCAAACGTGTCTAACT GGATAGATTCTGTGAACCGGAAGCGAAACTTTCACAGGGATGAATTCATTTGCTGTTCAAGCTGCAACAAGAGGCGCAAG TTTCGTCTCAACTGCAGGGACGAAATCCGCATCTACCATGCTGCTATGAACAACAAAATGTGGAGTTGTTCTGATTGGCC TTATCAGAAAATAACTTGTGATCATGAAGAAGAGAGATCAAGTGTTAGGAGTTGCAGGGTTTGTCCTCGCTATTCATTAT GCGAAGGTTGCTCATCTTGTTACTGTGGAGGTTGCATCAAGTGTCGCTTTGAGGATTGCGATTGTCAAGAATGTAGAGAC TTCATGCTATTTGCAGAACCCTAG
Protein sequence (LotjaGi3g1v0322500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTQGTLKRSKHLVLQDDGGYVINFNEEELKTIQDFKRGNDYIEVYCGTTNKKYGDFAGRLRINGKGQFLITCQCCSECTL ENLTPEEFEKHAGKEGGGKWKNNIWVHEEKEDRVPISKTPLLQYYTHQANVSNWIDSVNRKRNFHRDEFICCSSCNKRRK FRLNCRDEIRIYHAAMNNKMWSCSDWPYQKITCDHEEERSSVRSCRVCPRYSLCEGCSSCYCGGCIKCRFEDCDCQECRD FMLFAEP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 23 | 247 | 225 | 1.1E-106 | – | |
| PANTHER | 23 | 247 | 225 | 1.1E-106 | ||
| SUPERFAMILY | 34 | 107 | 74 | 8.72E-5 | ||
| Pfam | 55 | 96 | 42 | 5.0E-6 | ||
| Pfam | 70 | 107 | 38 | 6.1E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
Expression pattern of LotjaGi3g1v0322500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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