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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0335800 |
| Transcript ID | LotjaGi3g1v0335800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Methyltransferase domain protein; TAIR: AT1G22800.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|O80543|Y1280_ARATH Putative methyltransferase At1g22800; TrEMBL-Plants: tr|I3T7V3|I3T7V3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0335800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:70573354..70576448) extracted from Lotus japonicus Gifu genome v1.2.
ATGCACGAGTGTTTTAATGGTACTTATGATGCTACCAGGGAGCTCAGAATAGCGTGTACTATTGCACAAATGGAGCGTGA AGGTGGTATCAGTCCACGAGTATCACCTTTGGCACAGGCATGTGTTCGTGCAAATATTATTTATTTATCAGTTATGATTA TCTATATCTTTAACAAATGCAATACTGTTTATATCAAATAGATTATCGTGGTTGTGTTCCTATTCCTTTTCAGTTGGCAC TGTGATTATAAACTCCATGGTTTTGTTTGAAAGCAAGTCCCATCGTTGATGATGGTTAAATTTGAAGCATGCAAGTTTGT TTGTTACATGACTTTCATGGCTACTCTCCAAGATCTGTTGGTTAATCTGGCCAGTTGTAACTTCAATTAAAGAAACCAAG ACTTGTATTTTTTTTGCAAGTAGAAGAATAATTCTGGAACTGAGAAGATCTTTTCTTCATTTTTAGGTTCGAGATGCTGG GAATCTTTTGACTAGGGCAGGGTTCACCCTTCCGGGTGTTGATGTCGATGAGTATGTAGTTAAATATGATAGTGGTGAGA GTTTCCTTTTGGTTTTACTATTGAACTATAGTACATGCATGACATGAACTAAATGAGTTATGAGTTCTGAAACTTTAGCT GTGTGGGATTCTTCCATAGTTTGGGATTCCCATTCTGGTTGATGACCAAATGAGATATTATTTGCAGAGTCATTAGCATG GTAGCCTTTATTGCCAGCTGATAGTGTATAGGAAGTAGAGGTCATAACTCATAAGGTACCAGATCACCATAGGCAGTATG GTGGTGATAAGGAATATTCACTATGGGGATAACCTGATTACTGCCAGGCAGGGAGGGATGAGAAAGGGTTGAATCTGTTA CATTGAATATTTAAAAGCAGAAAGAAGGAGAGGGAGGGCATGCAAAAACGGAGAGAGGAGTAGTGACTATCATTAACAAA AAAAAGGACCACTACTTTTAGTTTAACTATGATTATAACTTTTGTGCTAGTTCTATTTTTGTTTATTTCTGTAGTAGTCT TTGTTTCAGTTATTTCAGAAACAATATAGGAAAACATATGATTTGCATGTTCTCTATTGTTGAATATGTAATTAATCTTG TAGCTTATAATCCAGATTTATTTATGCATTTAATAGGATCAATATATATTTACTTGTTGTGATGTGGCTGGTATACTGTA TTTACTTATCAGCGTATGCTTCTCCTTTCTCTTTCTCTCAACATCTATGTAGGTGGTTAACTGATGATCTTATATAGTAT AATGTGATTATAGACTGACTATTAATTGTGTTATTCGTCCTCACAACCCGATATACGATGTTTGGTTGTGTATGACTGAA ATTGATCCCAAGCCATGATATGTAGTATTAAACCCTTGATGCCCTGTTTGCTTCAATTGAAGTGGAAGTGAGAGAAGTAC CGGAGAGGCAACTAGAAGAGAGAAGTAGCAGTTCTGTCGTTTGGAGCTTGAATGATGGTGAGGATTAGAGAATTGAAGTG TGTAGAACCCATGAAAATAAAATCTCTCGACAGAAGACGAGAGAATGAACCAAGAGCTACTTTTTATTTATTTATCAAAT ATTATATTTAGCCCAAACTTTTAAAATAAGAAATATAAGTTTTGTCTAAGGATAGAAGTGTCATTATATCAAAATATCAT TTTCTTTCTTTCCACTTTTCCATCTATGAAACAAGTAAAGAGAAAACTTGACTTTTCTTTCTCTTCTACTTTCCCACTTC CCTTAATTCAAACAACCTAGAAAGCTACTCATTTTCTCTTCTCTCATACTACTTTCTTCCCTACTTATTCCCACATCGAA ACATAGCCTAAATGAAATTTTAGAAGGCTGCTGCTGATACAGTTTCTTTGCTTTTACTTGTGGATAATGTCTGCCTGTTT CTCTAATCAAAATATTAAAGCTAGGATAATCTTAATAGTGTATTAAATTGACTGGTATTTTATTTATTGAATTATGTATT ACATTTTCATATTAACTTTTAAACTATAGATGAATTAATGGAAGGTTTATAAATACTTCCGTTTGGACATATAACCTCAT AGCTAGTCAGCAACCAACCTATTCACCAAGCTATTGAATGCTCTAGATGGGTATTTCCCATGCAAATATAACCTGTGGCT GTTGTGAACTTTTGATAGTTAAACTGCAATATTGAGTGATGTGATCCAACTTAAGCTAATATTATCTTATTGGGTGTAAG GATTTGAGGAAAATGAATTGTGTATTGATTTGATTCTCTCATACCAAAAAGCTATAGAAGTAATAACAGAACCTTCTCAT TTATATTTGATCTAATCGTCATTGTTTACGTCATAATGAGTTGTCTACTTGTATCGAAATTCTTTTAAGTCGTTACATTT CCTCTATTGAATAAAATATGACTTTGATAGCTTTGTAACTCTTGGGGTTCATTTTTGTATTGGTTGTTCTTGTTGCTGTT TAGTGCAGCTCTGGAGCTTATAGAACATCTCCGTGCAATGGGTGAAACAAATGCTCATTCTCAAATGAACACTGTAAAGT TTTTCTTTTCTTTCACTCAAATGGATGTTAAATAGATTTTCATTTTATCAAATGTTGAAACCTGATGTTGTTGCATCACA TCTTGAAAAAAATGTTATGCATAAATGACACAGATACTAAAGAGGGACACAGCCTTAGCAACTGCAGCTATTTATGATTC AATGTTTGCAGAAGAAGATGGTACTGTACCTGCAACCTTTCAGGTAATCAAAATTGAAGCATCATTTGACCATAAGAAAA CTGAAAGTGCTAATCAGAACTTTTAATATCTTCGTGATGGAATGTTACAGTGTTCTTTAAATTCGTCAACTGTTCAGCAT GCTAACTTCGCCCTGTGAAAGCGGCACTTGCATCAATTTTCTTCTTGGAAACAGTTGAACTCCGAAGAACATCTATTATA TGGTCTTTATATTTTTTGTAGGTTATATACATGACCGGATGGAGGGAACACCCTTCTCAGCAGAAAGCAAAACGAAGGGG GTCAGCTACTGTATCTTTCACTGATATTCAGAAGCAATTTGGTAGCCAGAATTGA
CDS sequence (LotjaGi3g1v0335800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCACGAGTGTTTTAATGGTACTTATGATGCTACCAGGGAGCTCAGAATAGCGTGTACTATTGCACAAATGGAGCGTGA AGGTGGTATCAGTCCACGAGTATCACCTTTGGCACAGGCATGTGTTCGAGATGCTGGGAATCTTTTGACTAGGGCAGGGT TCACCCTTCCGGGTGTTGATGTCGATGAGTATGTAGTTAAATATGATAGTGCTCTGGAGCTTATAGAACATCTCCGTGCA ATGGGTGAAACAAATGCTCATTCTCAAATGAACACTATACTAAAGAGGGACACAGCCTTAGCAACTGCAGCTATTTATGA TTCAATGTTTGCAGAAGAAGATGGTACTGTACCTGCAACCTTTCAGGTTATATACATGACCGGATGGAGGGAACACCCTT CTCAGCAGAAAGCAAAACGAAGGGGGTCAGCTACTGTATCTTTCACTGATATTCAGAAGCAATTTGGTAGCCAGAATTGA
Protein sequence (LotjaGi3g1v0335800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHECFNGTYDATRELRIACTIAQMEREGGISPRVSPLAQACVRDAGNLLTRAGFTLPGVDVDEYVVKYDSALELIEHLRA MGETNAHSQMNTILKRDTALATAAIYDSMFAEEDGTVPATFQVIYMTGWREHPSQQKAKRRGSATVSFTDIQKQFGSQN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 12 | 156 | 145 | 1.6E-67 | – | |
| PANTHER | 12 | 156 | 145 | 1.6E-67 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0335800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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