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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0340700 |
| Transcript ID | LotjaGi3g1v0340700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Auxin-responsive protein-like protein; TAIR: AT3G20220.1 SAUR-like auxin-responsive protein family; Swiss-Prot: sp|P32295|ARG7_VIGRR Indole-3-acetic acid-induced protein ARG7; TrEMBL-Plants: tr|V7AQC2|V7AQC2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0340700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:71537998..71540494) extracted from Lotus japonicus Gifu genome v1.2.
AACGGTCAAGATTAAAACATTAAGTATAATAAGCATTCTGGCTGACTTTAAATTGCTTAATATTTGATTTTAATATGTTT TTTTTGAAACCTTATTTTAATATGTTAATTGCCCAAACTTGTGCGACATGCTTTATGAGTTGTTGCTTTAATTGATCTCA AAATTGGGCAAATTCTATTCCACCTATTTTCACCTTTTCATGTAAATTCCACTGATCTAAACAACGCATACAAGTTTACT AAATTAGTCAACAAAAAATCTAAAATGCTATGTTATGTATTTTTATTTTTTTCCCTTTAATTTAAATCCTTTATAAAATT ATAAATACATTTCAACAAGTGTCGCAAGAGAATTACTATTATTAAACATCTAACTATGAGTTGTAATCCTTGTTCCGAAA CAAACAAATTACAAGAACCAATCATTGAGCTATAAAATCGTGAGGCTCATAATCAAGAACCAACTCATGGTTCACCTTGA CTCAAAACTACATGCAACAAATAAATTAACATGTTTGTGGCACCACTAAGCATTCAAATTTCAAATCCTCTTGCTCTCTA ATAAAATTCTTAAATTGATATAAATTCCCCTGGAGCAGATCAGAAACGAGGAAAAGTTTCTTCACGCGAAACTTTTCCTC TTGGATGGCGCAAATTATTTTTATAGATTTAACAATTGAAGCAGATATTGAATCATGAATTAATGTCTGTAAAACATTAT TCACTTGTTTTTGATTAATTGAGTAGTTCTCTATGCAAGCATATTAGCATATATATGTAAATATTTAATTAATTGGTTGT GAATTGAAAATGAAACTTTCTACCATTACAAAACTCCCAAGCCAACTCAACAGGCTGGCATCATCCTCTGCTTCCCCTGC ATTTGCCCGAAAGACGACACACAAACCGTTGTTGACGGCCGGTGAATTCTCTGATGGCTCACGGAGCAAGGTTCCCAAAG GATTCTTCGCTGTCTATGTCGGGCCGGAGTTTCGGAGGTTTGTGATTCCAATAAGCATCTTGGCCATGCCGGACTTCAGG GATTTGATGGAGAGGGTGGCTGAGGAGCATGGTTGTGATCATAGCGGTGCCCTTGAAATCCCCTGCGATGAAGAGCATTT TGAACATGTTTTGATGAACTGTTACGAAAGGCAACAGAGGTTATCTTCTAAGAAACACAAGATCAAGCTTGGTAAGATTC CTCTGGTGTATTAATTGATATGTATTGACTACCGTTTTTAATTAATGGTCATTTCTCTTGTATGTATCAAACATGCAATA TAGTTAAACCCGCAGCTTTATTATTTGATATCATATCATATGAGATTTATATACATATATAGGCATATAGCACACACCAA TAGTGGTTGGTTCCATGTGCCTAATTTGATTTAAGTTTCGTTTCAGATTTAAGTCTTGTATATCTAAATATAGTAGTTGA GAGAACTAACAACACCTAATTTGAACGCTCCTGGCTTGTATCAAATAAAATTAAGGGTGCACATGGGTCGGTTTAGATCA GATTATGATCAAACTAGAACCAAAACCGAGCAAAAGGGATGGATTGAGTTGGATCGGGTTCCTACGATTTTTCTGTATGA TCCCAAACTGAACCAACCCGATGGTGTTTGGGTTGGACCGATTCAATTTGTCTGGGTCTAGTGCATTATACAAAAAAAAA GTTTGTTTTGCTGTGTTTTTAGCATATCATTGACGATGAACTCTACTTGGCGACAGACGGAGGCACCACAGTGTGAGGCA ATGTGATTGCATCATGAGTGAGAAGGAGAATAGCAGACCAGGATTATGAACATCGCATCGTGGAAGTTGAACGAGTCACA ACGCCATGAAGGATTAAGAGAGACAATGAAAATAGTGTCTTCGTCGTGAGGATGGAGAAGAAACATAGGAGGGTGAAGGA AAAAGAGGGACTGCATCATGAGGGAAAAGAAAACCACAGAAGGGTGACAGAGGAAGAACGACATCATCATGCGGAGAAGA GATCCAGCGAACAAGTGTGACGACACAGGTGTACACAATACCTAGGGTTAGATTTTGGGAGTGAAAATGTGAATGCAAAT GTGAAGTGAGTGAGTGAAAGTGTGAAACATGGTCGAGCCTAGATAGCTATGTTCGGTTCAGATTTTGATTTTCCAAACAC GAGACCCGAACCAAACACCTTAGGTTACCCACCTCCAAATCCGAACTTGCTCGCGAGCCCGACCCATCCCGTGTTTCTGC GTTGGGTTTGAGTCGGGTTGACCAGGTTGGTCCAATCAACCAAACTCGCGTTTGCACCCGTATATAAAACGGCAAAAGTA CATGTGCTTAAGTGAGCTGCAATTGTGCTCCTATTAACGAAACAAACGTGAAGGGGTAAAGTCATGCTATTCTTAAATTA TCGGAATGTAAGCAGTGTATTTTGAAAGTGGGGATCAAAACCGACTAATACTTACTTTGTGGGCACGAGAAACATAGATA TATAAGGTCAATTTGAT
CDS sequence (LotjaGi3g1v0340700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAACTTTCTACCATTACAAAACTCCCAAGCCAACTCAACAGGCTGGCATCATCCTCTGCTTCCCCTGCATTTGCCCG AAAGACGACACACAAACCGTTGTTGACGGCCGGTGAATTCTCTGATGGCTCACGGAGCAAGGTTCCCAAAGGATTCTTCG CTGTCTATGTCGGGCCGGAGTTTCGGAGGTTTGTGATTCCAATAAGCATCTTGGCCATGCCGGACTTCAGGGATTTGATG GAGAGGGTGGCTGAGGAGCATGGTTGTGATCATAGCGGTGCCCTTGAAATCCCCTGCGATGAAGAGCATTTTGAACATGT TTTGATGAACTGTTACGAAAGGCAACAGAGGTTATCTTCTAAGAAACACAAGATCAAGCTTGACGGAGGCACCACAGTGT GA
Protein sequence (LotjaGi3g1v0340700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKLSTITKLPSQLNRLASSSASPAFARKTTHKPLLTAGEFSDGSRSKVPKGFFAVYVGPEFRRFVIPISILAMPDFRDLM ERVAEEHGCDHSGALEIPCDEEHFEHVLMNCYERQQRLSSKKHKIKLDGGTTV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 26 | 26 | - | – | |
| Pfam | 32 | 108 | 77 | 3.4E-22 | ||
| PANTHER | 39 | 115 | 77 | 4.4E-34 | – | |
| PANTHER | 39 | 115 | 77 | 4.4E-34 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Response to auxin | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an auxin stimulus. |
Expression pattern of LotjaGi3g1v0340700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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