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LotjaGi3g1v0341000.3

Overview

Field Value
Gene ID LotjaGi3g1v0341000
Transcript ID LotjaGi3g1v0341000.3
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Mitochondrial carrier; TAIR: AT3G20240.1 Mitochondrial substrate carrier family protein; Swiss-Prot: sp|Q9LJX5|BRTL1_ARATH Probable mitochondrial adenine nucleotide transporter BTL1; TrEMBL-Plants: tr|A0A151SGA7|A0A151SGA7_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0341000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:71583493..71586342) extracted from Lotus japonicus Gifu genome v1.2.

AAATATCTTGTTTTCATTTTTTTTGTTGTTGCAAAAAACAGGAACCAAAAATGGCATTGGAATCTCAATCGCAGAAGAAG AAGAACAATTTGCATCATCATGGGCATGGGCAAGGGGTTTTCGGAGATGTATTCAGCATCATGAAAGAGATTGAAATGGA CCTGGATTTAAGATTTCAATTACCTCACCTTGCACTTCCCCCAGTGAGTCACTGTTTTCTTCATTTAATTTGTGAAGGGT TTTTCTTTGATTCTTAATGGCAAGAGTTGTTGTTTTCTTTCAGGATTTCTTGGGTAGCAGAGAAGTTCGTGAGTTTATTA GTGGGGCTCTAGCTGGGGCTATGACAAAAGCTATACTTGCTCCTCTTGAGACTATCAGGTTTACTCTTTATTAATCTCTC AACAACTTTACACAAATTATTTCCAAGGCTTATAAACTTTTAGTACAAAAAGGAATAATTAGTTCAAGTTTTTATGCCTA TTCTTTAAGGATGATTTCTTATCCTACCACATTTTAGTAAATTCTATTCCTTAAAAATAGAAATTGATAAGGGCCACTGC CATGGTGTGGCTAGTGTATTCTTTCATAACTGTAGTAGCTTACCTTTATTTTTCCTTCAAGTATAATAATACATCTTTAC CATCCCGGATAACTGAATGTTGTGTAAAACACTAGTGTGTGATTGTGAAATGTTATACATTATTTGAACTTACTGCCTCG CTCATACTCTGTGATCTACGCAGGACAAGAATGATAGTTGGTGTTGGGTCGAGAAATATCACCGGTAGTTTCGCTCAGGT TATAGAGCAGCAGGGGTGGCAAGGATTGTGGACTGGAAACATGATCAATATGATTCGTATAGTTCCAACACAAGCCATTG AGCTTAGCACATTTGAGTGTGTAAAACGGGCAATGACCTCAGTGCAAGAGAAGTGGAAGCAGAATGAAGGCCCTAAGTTG CAGATTGGTTTCATCAATTTGAACTTATCTTTATCTTGGATTTCACCAGCTGCTGTGGGTGGAGCAGCTGCAGGAGTTTC TAGTACACTTGTATGCCATCCCCTGGAAGTTTTGAAGGTATTAGAAAACTATCTACCCGTTTCGATGCAAACCAAAGAGC ACTTATGGAGCTTATTTAGTGCATTTTCTAGTAGATAAGCTTCAATAAGTCCGTATCTCCAAACAGGCTCTTATATGCTA AGTTAAAAGTATTAATATTGTCTTTGGACATCAGATATATCAGACTAGAATGATGACTGACGGCACAATCAGTAGCATTT ATATTTTCTGTACTGTTGAGCTAATAATGACCAAAACATGAAATTATTGAAGCTTTCTTTTCTTGTCTTTTACTCTTGTT TTAGATTCTAATTGTCTTCTGATTTTTTATTACAGGATCGGCTCACTGTAAATCCTGAAGCCTACCCTAATTTAGGCATT GCAATTAGAAATATTTATAAAGCCGGTGGTGTTGGCGCTTTTTATGCCGGTCTTGCGCCCACTCTAGTTGGCATGCTTCC ATACAGCACATGTTATTACTTTATGTATGAGACGATAAAGAAATCTTACTGCCAGACCAAAAATAAGAAGTCGTTAAATC GTCCAGAAATGCTTTTAGTTGGAGCTCTTGCAGGTAAGAGATTCTCTATTACTTGTTAAGACATTTTTTTAATGCTTCTC TTTGTTTATAGGTCTCCATCTTGCCCAGACTCTCACATGACCGTGTTGCATGAAGCATATGATTGCATGAAATATTCTTC TGTTTGCTTCCGTTTCGCTTGTTTTTCTAACCCAACACTTGAACCACATTTATACAATGATGGGCAGACATCATTGAATA TCTGGTTCAAGTGGTACATGTTTGGTTCCCACTAAGCAATGTCTCGGGTTCGAGTCTTGTATATGGAAAAAACCCTCGCT AGGAGAGCTAGCCCCACCATGATGTGGATGTTCCCAGCTCGAACAGAATTGCTTCCTGCGGAAGATACCTATATTAGACC CAAATTGGTAATATAAATGATTTATGCTTAAAAGCTTCTTTATGCACACTCAGGTTTAACTGCCAGTACAATTAGCTTCC CATTGGAGGTGGCTAGGAAGCGCCTGATGGTGGGAGCTTTGCAAGGTAAGTGCCCGCCAAACATGGCGGCAGCACTTTCA GACGTAGTTCGAGAAGAAGGTCTGAAGGGTCTCTACAGAGGATGGGGTGCAAGCTGTTTAAAGGTTATGCCATCCTCTGG CATTACATGGATGTTTTATGAAGCATGGAAAGACTTGTTGCTTGCTCAGAAGGGTAATTCCTTGTAGTTATAGCCTAATA ATAAGGTTACATGGGTTTTTAGCCTGTTTCGTTTTGAGTTGAAGAATGGAGGATAATTCAATACAGGGTTAAGAAATAAC AAAAATAATTGGATAACCGTTTTTGCCATGGTCACTCTTTGGAATGTTCATTCCTACCTACTAACCAGTTAGTTAGCCCA GCTTATGAGCTTCAGGTTTTGATATTTGATTTGGGAAGATTCTCATCAAAGAGAAAGGTTCAAGAATGAGATTGTTCTGA GGTTTCCCTTTTTTTTGGGGTTTCTTTCCATCATAACTTTTATATTTGATCTAATTGTATCTGCTGAGTTTTTTGGTCTT TAATATGTACCGGCTGAGTTAATATCACTGTAGAACGTTTTGGAATAGTTATTTCCTTATAAATTATAACATACATACAT GAGTTTTTTTATGAGCTGAGTATAAGTGCGAGTTATGAGTTTTTTTTTTTAATTTGGAGTACAATACCTTTTGATAGAGC TAAGTTAGAAAGAAATAATTTTGAAAGAATGCATTTTGGTAGAATAATCT
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0341000.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCATTGGAATCTCAATCGCAGAAGAAGAAGAACAATTTGCATCATCATGGGCATGGGCAAGGGGTTTTCGGAGATGT ATTCAGCATCATGAAAGAGATTGAAATGGACCTGGATTTAAGATTTCAATTACCTCACCTTGCACTTCCCCCAGATTTCT TGGGTAGCAGAGAAGTTCGTGAGTTTATTAGTGGGGCTCTAGCTGGGGCTATGACAAAAGCTATACTTGCTCCTCTTGAG ACTATCAGGACAAGAATGATAGTTGGTGTTGGGTCGAGAAATATCACCGGTAGTTTCGCTCAGGTTATAGAGCAGCAGGG GTGGCAAGGATTGTGGACTGGAAACATGATCAATATGATTCGTATAGTTCCAACACAAGCCATTGAGCTTAGCACATTTG AGTGTGTAAAACGGGCAATGACCTCAGTGCAAGAGAAGTGGAAGCAGAATGAAGGCCCTAAGTTGCAGATTGGTTTCATC AATTTGAACTTATCTTTATCTTGGATTTCACCAGCTGCTGTGGGTGGAGCAGCTGCAGGAGTTTCTAGTACACTTGTATG CCATCCCCTGGAAGTTTTGAAGGATCGGCTCACTGTAAATCCTGAAGCCTACCCTAATTTAGGCATTGCAATTAGAAATA TTTATAAAGCCGGTGGTGTTGGCGCTTTTTATGCCGGTCTTGCGCCCACTCTAGTTGGCATGCTTCCATACAGCACATGT TATTACTTTATGTATGAGACGATAAAGAAATCTTACTGCCAGACCAAAAATAAGAAGTCGTTAAATCGTCCAGAAATGCT TTTAGTTGGAGCTCTTGCAGGTAAGAGATTCTCTATTACTTGTTAA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0341000.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MALESQSQKKKNNLHHHGHGQGVFGDVFSIMKEIEMDLDLRFQLPHLALPPDFLGSREVREFISGALAGAMTKAILAPLE TIRTRMIVGVGSRNITGSFAQVIEQQGWQGLWTGNMINMIRIVPTQAIELSTFECVKRAMTSVQEKWKQNEGPKLQIGFI NLNLSLSWISPAAVGGAAAGVSSTLVCHPLEVLKDRLTVNPEAYPNLGIAIRNIYKAGGVGAFYAGLAPTLVGMLPYSTC YYFMYETIKKSYCQTKNKKSLNRPEMLLVGALAGKRFSITC
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24089
36 274 239 1.0E-118 –
PANTHER
PTHR24089:SF681
36 274 239 1.0E-118 –
Gene3D
G3DSA:1.50.40.10
56 281 226 9.8E-51
IPR023395
ProSiteProfiles
PS50920
56 139 84 20.196
IPR018108
SUPERFAMILY
SSF103506
59 276 218 3.66E-42
IPR023395
Pfam
PF00153
59 141 83 1.2E-17
IPR018108
PRINTS
PR00926
61 74 14 2.5E-13
IPR002067
PRINTS
PR00926
74 88 15 2.5E-13
IPR002067
PRINTS
PR00926
114 134 21 2.5E-13
IPR002067
TMHMM
TMhelix
164 186 23 - –
ProSiteProfiles
PS50920
167 251 85 20.604
IPR018108
Pfam
PF00153
173 253 81 3.4E-16
IPR018108
TMHMM
TMhelix
223 245 23 - –
PRINTS
PR00926
224 242 19 2.5E-13
IPR002067

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005347
Molecular function ATP transmembrane transporter activity Enables the transfer of ATP, adenosine triphosphate, from one side of a membrane to the other.
Subterm of
GO:0055085
Biological process Transmembrane transport The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0341000.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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