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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0341400 |
| Transcript ID | LotjaGi3g1v0341400.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF1666 family protein; TAIR: AT3G20260.1 DUF1666 family protein (DUF1666); TrEMBL-Plants: tr|I1KG31|I1KG31_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0341400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:71619331..71623795) extracted from Lotus japonicus Gifu genome v1.2.
GCCTTCACATTTATTACATTTTTTTTCTGTCTATCCATTTTCTCACTGTACTCTTCTCACTTCTCTGTTCCCTCCTCTCT CTTTCTCTCCGCGTCTCCTCAGTCTCCATCTCTAGGGTTTCTCTCTGCAAACCCTGCTCACTTGCTTTCCTGTTAGTCTC ATTGATCTTGCCATTCCCAAATACCTTAGGTAGGTCATCAATGGAACAATCTTCTGTGATTTTTTCATTTCTTTTTGTCC ATTTTAATCTTTGCATTTGCATGTACCCTTTGATCATTTTTTCTATCTTTACTGCTTAATGCATTTGCATTTCTCTTTTG AATTGATTCTGCTTAAAAAAATTGTTTTTTTCTTTTGAATCAGTTCCTAAAAATCTGTTTTTTTGATGATTTTTCTGTTT GAATCTGCTTTTGAAGGTCGCATTCAGCTCTTCAATGTAGGAACAAACAATGTGGAAGAAAACTAGATGAGACAGAGAGA GAGAGAGTTTGTCTTGTCAGTGGCTCTGATCTCTGTGAATGATCAATGCTGTGTTCCTGTTTCATGCCAAAGGTAACTTG AAAGAATCTACCATCTTGCATTTTTGGAAGGATTCATGTGAGAGTGAAAGTATTTTCTTTTTGTTTTTTTCTTTTGTTCT TTTGGGGGTGAATGAGTACTTTTCTTTCATCACCTTTTTATTAAGATGCTTAGATTCTAACTTTTCAAGGGTTTTGCTGT CCTCTGGTTTTCTGATGGATACTAGGAGAATATTGATTCCTGTGATCCACTTGAATTCAAAGGGATGCCATTTCCATTGT GATGTGTGCAACTTGAACATTAGATCACTGATGTCTTGTAATGGAAGTTGATAGGGAATCTAGGGGCTCATGGTTACTTT ATTATTGTATAAGTTAAAGGCTTTTTTCTTTGTTGTTAAATCCAAGCCTCTTGTTTTGTCCTGCTTGAGAAACAAATCTG AGTTGTTCCTGCTTCATTCTCTTTCTGTTTTGATGTGATTATAGGTTTTGATTAAAATATTGTTGGGCTGAGCTTAGAGT AGTTTGTTCTTGAAAAGTACGGTGGCAAGGCATGGATTTTTTGAAAATCAAGAAGTTCAGGAAATCTCAGAAAGGGAATG GAGAAAAGGATTTGACGGACAAGGCAGTGCCGGAGCCTGAAGAACCAAAGACTAACACTGGCGGTCCTGATCAGTGTAAA TCAGAAAATGCTGATCCTGCTGGTGACGCTGAGGACGACGATGATTTTATTACCAACGAGGTCAAGAGGAGGCTGAAAGA ATTGAGAAGAAACAGTTTTATGGTGTTGATTCCTGAAGAAGATTCCTGCCCGGAGGAGGGGGAGGATGAAGAGGAAGAGG GGGAGACTAGCTCGAACGAGTGGAGGGATGTGGAGGCAGAAGGTCAGCAGTGGTGGCGTGGCTTTGATGCTGTGTTTGAA AAGTACTGTGAAAAAATGCTATTCTTCGATCGGATGAGTATGCAGCAGCTTAATGAAATTGGCAAAGGTAGATTCTTTTT TTAATCTTACCATCTGGTCATCTCTGTTGGTATTAGTAATGGCTGGGAATATCTATTTAGGTTTTTGCATTGGGTTCATT TAGGTGTTTTGTCTGTTATACTTATGATGTGATTAGAACAATAACAGATGCTTGACAAAATTTGCTCTTTGCTATTTCTT TCCGGAATATGGGAATGTTTATTCAGATATACGATCTTGCAAGCATCGCGGTATCTTATCAAGTGAAATTTGATTTACTT GAACATTTGAATTATAAGTTCTGCTATTAGAGATCCACGGTGCTTAAAGGTGTGCTGACATTCAAATAGTACCTCAATTG TGATTTTTTGCGATTAAGCTTGGCCCATGTGATACGGGTTGACCCGTTTCTTAAATCGGGTTTGGCTTGTTTCTTAAATG TGTCGCTGCAAAACCCGTAGTGTATTTAGTAGCTGAGCCTCGCTTCTTATCCTCACTCACGTTCGCGAGTCCCCTTCTCT CCCCCGCAGCACCGGTGATGACTCTCTACCTTTGTTGACGAGGCTCCTCCTCCACCGGTGACAAGGACAAGGACTGAGGT TGGTAAGTCAAGTGGTGGTGTTCGGACTGAGGCTGGTGCCAAGGCTGTTTTAATATGACATTCCTATGAATTAAGAGTTA TTTTTATGACTTATGAGTACAGCTTTATTTAAGTAATTCTAGTTATTTAATTTTTGAAGTGTTTCTTTTCTTATTTGTTC TATTTTATATGCGTATTATAGAATTTTACTAAAGTTTAGGATTAATATTACGGTTATGTGATTTACGATTAACACATCCC TCCCCGATTAAAGGCATGATTCCGATTTTGACTATCTTGGTTTTAACTACACAACGGAGTGTATTATATATACTCGGCAG AATAAATGCATGTTATTGTTGTTTCCTTATAAACAATGATTACGCTACCTAATTACAATAATTATGAGATATTTTACCTA TTTACATTATTTCTAACATTACATAATAAGTTCTTTGGTGAATAATAAGTTCTTTGGTGAAGAACTGAAATCTAGTTTTA TTGAATTTGTTGAAGGTATTATTTGGAAACTTGGAGATAGTCATCAGAATATTTTACCACCTTAAAATTCCAACTGCTAA CAAAATATACTATTGCTATCATCTCCACATTTGTTATATCATGTGATATGCTACATATTCATTGTTAGGTTCTCTACAAA CTTCAACTCAATCTCCAAGATCTGCGTCGAAGAAGTTGACTTCTCCTCTTCGATGTCTTTCCTTGAAAAAATTTGAAGAA CCTGATGAGGATACTGAACATCTTCAACAGCCTGGAAATGATCCCTACCTGGATATTGAAATGGCGTATGTTGGTCAAAT TTGCTTAACTTGGGAGGCACTTCATTGTCAATACTCGCATACAAGTCAGAAGATATCCTGGCAACCTGAAAATCCTACCT GTTACAACCATAGTGCGCAGGAGTTTCAGCAGTTCCAAGTTCTATTACAAAGGTTTATTGAAAATGAACCTTTCGAGCAG GGCCCTCGAGCTGAAAGTTATGCTCGCACAAGGAAGGCTTTGCCTAAACTGCTACAGGTTCCTAATATACGAGGCAAGTT TTCTGTAAATCAACTACATTCAATTGGGCTTTCATGGATATCACTGAAGTAATTCGCAATCTGAGAAAAAAAGGCACTTT TTCATTGGTTGTCTTGTTTGTCACTGAATGTAAATGTAAAATTCTACATTTGTCTCGGATGTTAATGTTTGTAGGACTAA CTATCCAACTTCGTGAATCTATTCAGGTTCAGATCATGAATTAACAGATGATTCAGACATGAGAGTTCTTGCTCCTGATC TTATCAGGATAATTGAAAATTCTATCCTCACATTCCACCTTTTCCTGAAGAGGGACAAGAAAAAGTCAAGTGGTGTTATC AACCTGTTTGGAAACCAGAACCAGCTTGCAACTCCTCTTCAGCAGGTTCAATCTACACTTGATAAGGTAAAGTCAGATCC TTTACCTTGTGATGCAAGTTTGCAATTTTATAGGACTAAGAAATCATCCATCTTACACTATTTTCTTGTAAATGCAGAAA GTGTTGAAACTTAAGGAACTGCGCAGAAAGGTGAAGGGTTGGAAAAAAAATTCCTGGCCCCAGAAGCACGAGGACATTCA GCTATTGCTTGGCCTTATCGATGCGAAAATCATATCAAGGGTTCTGAGGATGACGCGGATGAGTAGAGAACAGCTGTTTT GGTGTGAAGAAAAGATGAAGAAACTGGATTTATCAAATGGTAGGTTAGAGAGGGATCCATGCCCTATCCTCTTCCCTTGC TAGTAGTAGTAACAGTGGTGTATATCTTATAAACAACTTAAACTTCTTTCTGCTGGGAATGATAATTGTTGCGGATGGTA CTATCGATTTTAGCTGCTTACTTAGGATGTTTTGGGAAGAAATCTCGATGATTTAGGACAATTAAAGAGGAAGAAGGTTT ATCTGCGTGTCTGAAATTAATTTATGGTTGTTCACCCATAATTGTTTCTTCCTTGCTTGTTTAACATACCTTTTTTTTTT TTTTTAAAATTTGAAACCTTGTTTAACATACTTAAGGATACCAACATGGTGTTGGTCTAGCGATAAGCAAGTTAGACCCC GTTAGAGTTATGACACATTCGAACTCTGAGAAAGTCATTTGTTGGGAGGTCGGGATGGGAGGAACAACTATAGTTTCCTG ATGGAGACATGCAAGTCAACTATAATAGAACATAGTTGAGGATTATTCTTGCTGTTTCTTCCACTCGATTTCATGTTACC TGAATGCTGCTTTTTTATAAAGTGCTCCTATTCCTATAAATATGGCGTGGGCATGGAATATTTTTCACCATCCAATTGCT CAAGTATATATGACATAAGGTTATTCCTTTATTATTGGTTAGAAATATAGCTTCCTGTAAAGATG
CDS sequence (LotjaGi3g1v0341400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTTTTTGAAAATCAAGAAGTTCAGGAAATCTCAGAAAGGGAATGGAGAAAAGGATTTGACGGACAAGGCAGTGCC GGAGCCTGAAGAACCAAAGACTAACACTGGCGGTCCTGATCAGTGTAAATCAGAAAATGCTGATCCTGCTGGTGACGCTG AGGACGACGATGATTTTATTACCAACGAGGTCAAGAGGAGGCTGAAAGAATTGAGAAGAAACAGTTTTATGGTGTTGATT CCTGAAGAAGATTCCTGCCCGGAGGAGGGGGAGGATGAAGAGGAAGAGGGGGAGACTAGCTCGAACGAGTGGAGGGATGT GGAGGCAGAAGGTCAGCAGTGGTGGCGTGGCTTTGATGCTGTGTTTGAAAAGTACTGTGAAAAAATGCTATTCTTCGATC GGATGAGTATGCAGCAGCTTAATGAAATTGGCAAAGGTTCTCTACAAACTTCAACTCAATCTCCAAGATCTGCGTCGAAG AAGTTGACTTCTCCTCTTCGATGTCTTTCCTTGAAAAAATTTGAAGAACCTGATGAGGATACTGAACATCTTCAACAGCC TGGAAATGATCCCTACCTGGATATTGAAATGGCGTATGTTGGTCAAATTTGCTTAACTTGGGAGGCACTTCATTGTCAAT ACTCGCATACAAGTCAGAAGATATCCTGGCAACCTGAAAATCCTACCTGTTACAACCATAGTGCGCAGGAGTTTCAGCAG TTCCAAGTTCTATTACAAAGGTTTATTGAAAATGAACCTTTCGAGCAGGGCCCTCGAGCTGAAAGTTATGCTCGCACAAG GAAGGCTTTGCCTAAACTGCTACAGGTTCCTAATATACGAGGCAAGTTTTCTGTAAATCAACTACATTCAATTGGGCTTT CATGGATATCACTGAAGTAA
Protein sequence (LotjaGi3g1v0341400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDFLKIKKFRKSQKGNGEKDLTDKAVPEPEEPKTNTGGPDQCKSENADPAGDAEDDDDFITNEVKRRLKELRRNSFMVLI PEEDSCPEEGEDEEEEGETSSNEWRDVEAEGQQWWRGFDAVFEKYCEKMLFFDRMSMQQLNEIGKGSLQTSTQSPRSASK KLTSPLRCLSLKKFEEPDEDTEHLQQPGNDPYLDIEMAYVGQICLTWEALHCQYSHTSQKISWQPENPTCYNHSAQEFQQ FQVLLQRFIENEPFEQGPRAESYARTRKALPKLLQVPNIRGKFSVNQLHSIGLSWISLK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 282 | 282 | 2.9E-133 | – | |
| MobiDBLite | 1 | 60 | 60 | - | – | |
| PANTHER | 1 | 282 | 282 | 2.9E-133 | – | |
| MobiDBLite | 1 | 30 | 30 | - | – | |
| MobiDBLite | 79 | 107 | 29 | - | – | |
| MobiDBLite | 84 | 101 | 18 | - | – | |
| Pfam | 194 | 281 | 88 | 2.4E-42 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0341400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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