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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0354900 |
| Transcript ID | LotjaGi3g1v0354900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BED zinc finger,hAT family dimerization domain; TAIR: AT3G42170.1 BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER; Swiss-Prot: sp|Q9M2N5|DSLE_ARATH Zinc finger BED domain-containing protein DAYSLEEPER; TrEMBL-Plants: tr|I1KGZ4|I1KGZ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0354900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:73660433..73664823) extracted from Lotus japonicus Gifu genome v1.2.
GGTTAAGTAGTTTGAAGTTTGAACCCTTGATTGTCTCCTTTCTCTTCTTCGGCCACTTCCAACGCCGATCACCGCCGCGC TCTCTCTCTATCTCAGTCCCAGCAATCACTTGTGTTGGCTCTCCACTCACTTCACACCGCTCTTCTCTCTTCCGCCACCG TGCACGTGCTGTTACAACTCAAGGTGCTCTCTCCCTCTCTTTCTCCTCCTTCTGTTTGTAAATGCAGTGCTACTCGTGAA CTTCATTCTTGGTGTTTTTCATTTTCTGTAATTGCACCTGTTGTTGTGTGTTTGATCCTTTAACACAAGTAGAGAAAATG AAACAGAATAACCAAACCCTACTGATAATTTGAGATGACATCTTTGTTTTGCTTTTATTTAAACGAATTTTACAGTTTCT GATGTTTGAGATTGTCTGTCATTGCCATGCATCGTGTTAAATTAGTGACCTAGAATTTAGAAAATCATATTGAAGCATTG TGAAATATTGGTCTCTGTATTCTTGCATTCTTCTCATGTTAAACTAGTGACTCAAACATTGCTCACTTGAAACATTTTTC CTCTATTTCATAGACATGAATTTGTGGATTGATTGAACCTAGGATTGCTTGCTTCCTGTGGTCCCACATGTTTGGTACAT TGGCCTCTGCATGAGGGTTTTCTATAGCGGTTGTGCCTGCATTGCGGTTTTTTAAATGTGAACCTGATATGGTATGTTGG ACCAATGTTTTAAATTGTGGTTTGCAACCGTATAGTGGTTCTTGATATGTTGGACCAAGGTTTTAAATTGTGGTTTGCGG CCGTATAGTGGTTCTTGATATAATTGAAAATTGTGATCAAATACGGCTGGTGCAAACCACAATTGCATGCGCGATGTGGT CATTGAGACCTCAAAAACTATGATATTTGAGCCGCAATTGTGGTTGCGGACCTTGATTTAAAACCATGGGTGAGGCGATG AATTTGGTAGGCGGTCTTCAGGGTTATTAAGAGAACCAAAGTAATTGTAAACAAGTCTCAAAATAAATCATAGATTTCCC CCCTTTAAATTGGTGTTTTGTTTACTCTGTATATGATGCCGGCATATGTACAAGGAATTTTAAAATGCTAATATGAAGTC CTTGTTGATCTAGACCCACTAGAGGTTTTAAATAACTATCTAACTATATTAGATTATTTGTAGATATTTTAAAGAAAGAA AAGGTGAATGCCAACTTTATTTTCATGGATATAAGTATGAGTGGAGAGGTGATGGAGAAAAATGGGGACATGTTATTTGG TGATTAATAGGTTTGGCTTTAAGTGGTTATCACAGGTTTCTTCTGTCGGAAAACATGCTGAAGCCAAAATAATTGATCAA AGTACGGATGAATGGATTAGTTTTAACATCTTTTGAATTATATGCCATTTATTTTTTGACATACGAAATGGAAAATTGGT CCACGTATCTGATCCAATTGGAAAAGGCTTTAGTTGGACAATTATATGTTGATTTATTTGGATTAAAAAACTAGCTTAGG GTTACAATCAGTGTTATCAAATAGCGGCGACGCCGTTATAGCGTAGCGGATTTTTGGCTAATCGCAACGCCGCTATTGCC TACTATAGCACGCTATTCCCGCTATTCGCCGCTGAATAGCGGCTGAAATAGCGGATTTTTGGCTCACTGCGATGGTCCGC GATCGCGATTTGACAACACTGGTTACAATGCTAAAAACTGTTTCTCATTTGTAATTTAGTCACATAAACAAGCATAACAT GATTTGAAGAAGGGACTCTAAGTTAGAAAGAGTTGCCCATTTTTCAAATTGATAATTTGCCTCTACTGGAAGTACTAAAA TGAACAAGGTAGCTGTTTCTTAAGATGTGATGAACTATGTTATCTTTGACTGTATTAGTGGATTTTTCACTTGTTGTTTT CATTTTATATGATTTGGTTGAACCTTCTGAAAGTCAAGACTGTATTAAGGGTCTGAGTTCTTCGTTTTGCAACTCACGTA TTGTTTGTTAGAGTTTGTCCTTAGTAGCTGAAGCTCTATGGATTTTATATTATGACTCTTGCTTTATCAAATTGTTATTT ATGTTTGTTGTGAAATATAATTAATAGCCTGCCTTGCTAATATGATGCAGCGGAAGAGAACTAATTCTATTGTTTGGGAA TACTTCACAGAGGAAGCTGTTGGAGCTGGATGTACTAGGGCTTACTGCAAAAGACACATTTCTTTTGGAATTTGTAAATG GCTCAGCAGAAAAATCAAGAGAGCTCATATACGAAAACCGGTGGTTCTCGAGATACCGTCAATCGTCTCAAGAAACGACC AAGAACAACACCTGTTGGTAATGGTATCTCATTTGATCAGGAGCGATGCAACCAAGACATTGCTAAAATGATTATTTTAC ATGATTATCCTCTTCATATCGTGGAACAACAGGGTTTCATTGATTTTGCGCGCATTCTTCAACCCCAGTTCAATCCACTA TGTTTAAAATCTATTGAAGCAGATTGTGTTGCTATATACCTCAAGGAGAAGCAAAATCTTTTGAATTTTATCAATGGGAT TTCTGCACGAGTCAACCTGACATTGGACTTATGGACATCAAACCAGACAACGGTATATGTTTTTATTCGAGGACACTTCA TTGATGGTGATTGGAACTTACATCATCCTATTCTCAATGTCTTTATGGTACCATTTCCTGATTCTGATGATTCCTTAAGT CAAATTATACAGACCTGCCTATCTGATTGGCTCTTGAAGGGTCGTCTATTTACCCTTGCACTTGATAAATCCTTCTCAAG TGAGACTGTGGTGGGAAATCTGAGAGGACTTCTGTCTGTTAAGAACTCTGTGATTCTCAATGGCCAGTTATTAAACCAGA ATTGTTATGCCCATGTTCTTAGTCATCTTGCGGTAGATGCATTACAGACAATGGGAGAAACTATTAGCAAAGTTCGTGAG AGTGTGAAATATGTGAAATCTTCTGAATCTCGTGAAAAGAAGTTTCTTGAGGTGAAGCAACAACTACAAGTACCTAGTAT GATGAAGCTCTTAATTGATGACCAGTGTAAATGGGACACAACATACCATATGCTTGTAGCTGCTTGTGAATTAAAGGAGG TCTTTGCATGCTTTGATGCCACTGATCCTAATTATACAATGACTTTCACTATGGATGACTGGAAGCAAGTTGAAACTCTC TGCACATATTTGAAGTATTTGTATGATGCGGCTAATATTGTAGCTTCTCAACTATACCCAACTGCAAACATTTTTTTTCT TGAAGTGTCAAAACTTCAGGTGGAGTTAGCTGATGCAGCCTTCTGCCAGGATCCTTTCCTTAGTAATTTGATTTTGCCTT TACATAAGTACTTCGATCAATATTGGAGAGAAAGTTGTCTCATCTTAGCAATTGCTGTAGCCATGGACCCAAGATATAAA ATGAATTTTGTGGAATTAACCTTTTCCAAGATATTTGGTGAGGATGCCAAGTCATGGTCAAGAGTAGTGGATGATGGTCT TCGTGAGTTATTCTTTGAATACAACACTTTCATGCTTCCTTTTACAGCTTCAAATGACTATGAAGAAGATGGGATTACGT TGAAGACAGAGGCATACCAAGAAGGGTCAATTGATGGTTCTATCTTTGTTGATGAGGATAAACTTTCTGACTATGAATGT TATATATCTGATTTTACTGGTATCCAGCAATATAAGTCAGAATTGGATGAGTATCTAGAAGAGCCTCTTCTTCCCGGGGT AGAAGAATTTGATATTTTGAGCTGGTGGAGAGAAAATGGATTGAGGTATCCAACATTGTCCAGAATTGCATCTGATGTTT TGTCAATTCCAATATCAACTGTGTCTGCAGAGTTTGTTTTTGATACTGAAATTAGAAAAATGGATAGCTACCGCAGTTCG TTAGGCTCACTCACCCTTGAGTCCCTTATTTGTGCTAAGGATTGGTTCCAGAGTAAAAGTTTACCCATTGATGTTTCAAA TGCACTTCCTAAGATGAGATTTTAGATACAGGTTTGTTGGTGTAGGGATAGAATTCTCAAATAGCTCTTTCAGCCATTGA AATTTTGAAACCATGATGAGGTTAATTCATTTGTGTGATTAATCAACACATGCTTTACCTTTGGTAAAAAATATCCTTTA TGTACAAAAGTGATTGTATTCATACCTCCAAACGGTTCATAGTTTTTTTTTGTCAATAAAGATTCATAGTGTCAAACTTC GGGTAAAAGCTTGGATTTTGTCGCCCTTCAGTTTTATTACTTCAGATAGGCTTGGACCTAATTATTCTGAGCTGATTTGA TGGATGCATTTTGTAGAATAGAATGCAGTAGATGTATCTTATGAGAAATGCGTTATATATGAGAATGATAG
CDS sequence (LotjaGi3g1v0354900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCAGCAGAAAAATCAAGAGAGCTCATATACGAAAACCGGTGGTTCTCGAGATACCGTCAATCGTCTCAAGAAACG ACCAAGAACAACACCTGTTGGTAATGGTATCTCATTTGATCAGGAGCGATGCAACCAAGACATTGCTAAAATGATTATTT TACATGATTATCCTCTTCATATCGTGGAACAACAGGGTTTCATTGATTTTGCGCGCATTCTTCAACCCCAGTTCAATCCA CTATGTTTAAAATCTATTGAAGCAGATTGTGTTGCTATATACCTCAAGGAGAAGCAAAATCTTTTGAATTTTATCAATGG GATTTCTGCACGAGTCAACCTGACATTGGACTTATGGACATCAAACCAGACAACGGTATATGTTTTTATTCGAGGACACT TCATTGATGGTGATTGGAACTTACATCATCCTATTCTCAATGTCTTTATGGTACCATTTCCTGATTCTGATGATTCCTTA AGTCAAATTATACAGACCTGCCTATCTGATTGGCTCTTGAAGGGTCGTCTATTTACCCTTGCACTTGATAAATCCTTCTC AAGTGAGACTGTGGTGGGAAATCTGAGAGGACTTCTGTCTGTTAAGAACTCTGTGATTCTCAATGGCCAGTTATTAAACC AGAATTGTTATGCCCATGTTCTTAGTCATCTTGCGGTAGATGCATTACAGACAATGGGAGAAACTATTAGCAAAGTTCGT GAGAGTGTGAAATATGTGAAATCTTCTGAATCTCGTGAAAAGAAGTTTCTTGAGGTGAAGCAACAACTACAAGTACCTAG TATGATGAAGCTCTTAATTGATGACCAGTGTAAATGGGACACAACATACCATATGCTTGTAGCTGCTTGTGAATTAAAGG AGGTCTTTGCATGCTTTGATGCCACTGATCCTAATTATACAATGACTTTCACTATGGATGACTGGAAGCAAGTTGAAACT CTCTGCACATATTTGAAGTATTTGTATGATGCGGCTAATATTGTAGCTTCTCAACTATACCCAACTGCAAACATTTTTTT TCTTGAAGTGTCAAAACTTCAGGTGGAGTTAGCTGATGCAGCCTTCTGCCAGGATCCTTTCCTTAGTAATTTGATTTTGC CTTTACATAAGTACTTCGATCAATATTGGAGAGAAAGTTGTCTCATCTTAGCAATTGCTGTAGCCATGGACCCAAGATAT AAAATGAATTTTGTGGAATTAACCTTTTCCAAGATATTTGGTGAGGATGCCAAGTCATGGTCAAGAGTAGTGGATGATGG TCTTCGTGAGTTATTCTTTGAATACAACACTTTCATGCTTCCTTTTACAGCTTCAAATGACTATGAAGAAGATGGGATTA CGTTGAAGACAGAGGCATACCAAGAAGGGTCAATTGATGGTTCTATCTTTGTTGATGAGGATAAACTTTCTGACTATGAA TGTTATATATCTGATTTTACTGGTATCCAGCAATATAAGTCAGAATTGGATGAGTATCTAGAAGAGCCTCTTCTTCCCGG GGTAGAAGAATTTGATATTTTGAGCTGGTGGAGAGAAAATGGATTGAGGTATCCAACATTGTCCAGAATTGCATCTGATG TTTTGTCAATTCCAATATCAACTGTGTCTGCAGAGTTTGTTTTTGATACTGAAATTAGAAAAATGGATAGCTACCGCAGT TCGTTAGGCTCACTCACCCTTGAGTCCCTTATTTGTGCTAAGGATTGGTTCCAGAGTAAAAGTTTACCCATTGATGTTTC AAATGCACTTCCTAAGATGAGATTTTAG
Protein sequence (LotjaGi3g1v0354900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAQQKNQESSYTKTGGSRDTVNRLKKRPRTTPVGNGISFDQERCNQDIAKMIILHDYPLHIVEQQGFIDFARILQPQFNP LCLKSIEADCVAIYLKEKQNLLNFINGISARVNLTLDLWTSNQTTVYVFIRGHFIDGDWNLHHPILNVFMVPFPDSDDSL SQIIQTCLSDWLLKGRLFTLALDKSFSSETVVGNLRGLLSVKNSVILNGQLLNQNCYAHVLSHLAVDALQTMGETISKVR ESVKYVKSSESREKKFLEVKQQLQVPSMMKLLIDDQCKWDTTYHMLVAACELKEVFACFDATDPNYTMTFTMDDWKQVET LCTYLKYLYDAANIVASQLYPTANIFFLEVSKLQVELADAAFCQDPFLSNLILPLHKYFDQYWRESCLILAIAVAMDPRY KMNFVELTFSKIFGEDAKSWSRVVDDGLRELFFEYNTFMLPFTASNDYEEDGITLKTEAYQEGSIDGSIFVDEDKLSDYE CYISDFTGIQQYKSELDEYLEEPLLPGVEEFDILSWWRENGLRYPTLSRIASDVLSIPISTVSAEFVFDTEIRKMDSYRS SLGSLTLESLICAKDWFQSKSLPIDVSNALPKMRF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 18 | 18 | - | – | |
| MobiDBLite | 1 | 38 | 38 | - | – | |
| PANTHER | 3 | 593 | 591 | 7.5E-295 | – | |
| PANTHER | 3 | 593 | 591 | 7.5E-295 | – | |
| SUPERFAMILY | 110 | 578 | 469 | 3.26E-57 | ||
| Pfam | 338 | 435 | 98 | 3.8E-26 | ||
| Pfam | 495 | 577 | 83 | 2.7E-27 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi3g1v0354900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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