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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0355700 |
| Transcript ID | LotjaGi3g1v0355700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Post-illumination chlorophyll fluorescence increase; TAIR: AT3G15840.1 post-illumination chlorophyll fluorescence increase; Swiss-Prot: sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic; TrEMBL-Plants: tr|I3SFH5|I3SFH5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0355700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:73746902..73748654) extracted from Lotus japonicus Gifu genome v1.2.
TTGAAGGTACAAGATTCCTTCATGGGCTAATTTTGAGCTTGGGAAAGCTTCTGTCTACTGGAAAACCATGAATGGCCTCC CTCCTACTTCAGTATGTCTGACAGTATTGAATCAACTCATTGGAGTTAGTTACTTAATCACCTTTTTAATTAATACTTTT ACAAATTTTTGCAGGGAGAAAAACTAAAACTCTTCTATAATCCCACTTCAACTCAACTTGCTCCTAATGAAGAATTTGGA ATCGCTTTTAATGGTAATTTTTGCTCCCAAAAAATTCATTTCTATAATATTTGTGTGGCCAAAGATTTGGATTCATCATA AAGTAGACATGGAATATTTCAAGAACAAGGAATGTCACAATTATTAATTTTAATTCCTTGAACTAATTCACGAAGGTCAT GGAAATTTTGCTTGTAAGAAAATTAACTGAAGTATTCTAAGATGTTGAGAGTCATGAAAGGTTCCACAATCCACCATGCT TTCCTGCGGCTCATTCTGCTATAAAAGGAAAATGTTAGAAATCTGCATAGTTGCATAGTTGAGACACCAAAATAGATACA CAGAGTGACAAATGAAAAGAAGAGAAAGAAGTAAGGAAGTGATTTATGATGGGTGTGATAAAAAGAAAGAGATAGAGAGA AGAATGAGATACCTATGGGGTGTATGCCATGTTGGAGTGTCTAAGTATCATAACTAACTATAGAAATGATCAATTGACAT TCCACACTATGTAAGAGATGATATGATTTTCTTAGTAATTAAATGTTACAATGTAATGAACATTCTTAGAATTCAGGCTA AGGCTAATTCTAACTCAAAAGCTACCTCAAAAGTGAGGATTGCTTTACTCTTTAGAAGAACCATTTTGACTATTTCATCT GTTCAGGAGGGTTTAATCAGCCAATTATGTGTGGTGGTGAGCCAAGGGCTATGCTCAGAAAAGATAGAGGCAAAGCTGAT GCTCCGATATATAGCATTCAAATATGCGTTCCTAAACATGGTAAGGGTGGCACTTTTATTTTCTGAATATCTTTAGCTGA CAAAGTCATTCAAAGTCCTCTTGTTAACTTCTTTTTTTTGCAGCTCTGAACTTGATCTTCTCCTTCACAAATGGAGTAGA CTGGGATGGTCCTTATAGACTACAGTTCCAAGTTCCCAAGGTTCTTCAGAACAAGCCTATTGAATTCTTTAATGAGGTAA AGTGGAAACACATTTTCTCTTTGAATTAACTGCCTCTAGATTAACATACAAATCATTCTAGCTTAATAATCAATTCACAT TCTTGCTTTTGAAGAAATAATAAAACGTAAACACCAAAGCACTTATGGAACTGTAAAACAAATCATTCTAGCTTAATAGG CAATTCACATTCTTGACTTAGTTGATATGCCTCAATTGACTGTACTTTTTTTTGGTAGGGTTTGGCAGAGGAACTGGGCA AAGAAGGAGCATGTGAGCAAGCAATCTTTCCAGACTCAAATAAAGTTATAACCAAATGTGCCATGCTTGGCAATTTAACA GTAGAAGGGGTGAGTAACATTTCTAAATTCTTGGATATTCTCTTTATTCTTTAAACCACTACTGCACATAGCCATTTTCT AAATGATGAATGAAAATATCACTGCAGGGTGATCGCTGCGATCTGAATCTTGTTGAAGGGTGCACAGATCCTAGTTCACA CCTCTACAACCCACTAGCCAATGTAGATGATGGAACATGTCCACTTGACCTGGATTCTGACTCTGAAGCCTAG
CDS sequence (LotjaGi3g1v0355700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATGGCCTCCCTCCTACTTCAGGAGAAAAACTAAAACTCTTCTATAATCCCACTTCAACTCAACTTGCTCCTAATGA AGAATTTGGAATCGCTTTTAATGGAGGGTTTAATCAGCCAATTATGTGTGGTGGTGAGCCAAGGGCTATGCTCAGAAAAG ATAGAGGCAAAGCTGATGCTCCGATATATAGCATTCAAATATGCGTTCCTAAACATGCTCTGAACTTGATCTTCTCCTTC ACAAATGGAGTAGACTGGGATGGTCCTTATAGACTACAGTTCCAAGTTCCCAAGGTTCTTCAGAACAAGCCTATTGAATT CTTTAATGAGGGTTTGGCAGAGGAACTGGGCAAAGAAGGAGCATGTGAGCAAGCAATCTTTCCAGACTCAAATAAAGTTA TAACCAAATGTGCCATGCTTGGCAATTTAACAGTAGAAGGGGGTGATCGCTGCGATCTGAATCTTGTTGAAGGGTGCACA GATCCTAGTTCACACCTCTACAACCCACTAGCCAATGTAGATGATGGAACATGTCCACTTGACCTGGATTCTGACTCTGA AGCCTAG
Protein sequence (LotjaGi3g1v0355700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNGLPPTSGEKLKLFYNPTSTQLAPNEEFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADAPIYSIQICVPKHALNLIFSF TNGVDWDGPYRLQFQVPKVLQNKPIEFFNEGLAEELGKEGACEQAIFPDSNKVITKCAMLGNLTVEGGDRCDLNLVEGCT DPSSHLYNPLANVDDGTCPLDLDSDSEA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 185 | 185 | 9.9E-114 | – | |
| PANTHER | 1 | 185 | 185 | 9.9E-114 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0355700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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