Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0356400 |
| Transcript ID | LotjaGi3g1v0356400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glucan endo-1,3-beta-glucosidase; TAIR: AT3G15800.1 Glycosyl hydrolase superfamily protein; Swiss-Prot: sp|Q9ZQG9|E1314_ARATH Glucan endo-1,3-beta-glucosidase 14; TrEMBL-Plants: tr|A0A1J7ICX3|A0A1J7ICX3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0356400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:73819228..73820612) extracted from Lotus japonicus Gifu genome v1.2.
ATGTTCTTTTCAAACATTGGGTTGCATGTCATGGAATTTGTAAACAAGCTTTTCACATTCTTGTGTGGTGCAGTTTCAGG TTCATTCAAAGGAACATATGGAGTAAACTACGGTAGGATAGCAGACAATCTGCCATCCCCTGAAAGTGTGGTTACTCTGC TCAAAGCAGCAAAGATAAAGAACACAAGAATATATGATGCTAATCATGATGTTCTCACTGCCTTCAAAGGTTCAGGACTC GAAATCATCATTGGACTCCCTAACGAATTTCTGAAAGACATAAGCGTGGCTGAGGATCGCGCCATGAGCTGGATCAAAGA AAATGTCCAGCCATACCTTCCGGGGACCAAGATCGTCGGAATCGCGGTCGGAAACGAAATCTTGGGAGGCGGAGATATGA TGCTCTGGGAAGTCTTACTCCCTGCAGCAAAAAACGTTTACAATTCCCTTGACAAGCTTGGTTTAACAAAACAAATTGAG GTATCAAGTCCACATTCAGAGGCAGTGTTTGCCAATTCATATCCTCCATCAGCATGCACTTTCAGAGATGATATACTCCC TTTTATGAAGCCTTTGTTGCAATTCTTCTCACAAATTGGAACTCCTTTCTACATAAATGCATACCCTTTTCTTGCATATA AGAATGACCCTCAGCACATTGACATCAACTATGCTCTCTTCAAGAAAAACCCTGGGATTTATGATGCTAAGACTAAATTG CACTATGATAACATGATTGATGCTCAAATTGATGCTGCTTATATTGCTCTGGAGAAGGTTGGGTTTGAGAAGATGCCGGT GATTGTTTCCGAGACAGGTTGGGCTTCTCGCGGGGACCCAGACGAAGCGGGAGCAAATGTGAAGAATGCGAAGACTTATA ACAAGAATTTGAGGAAGAAGCTAATGAAGAAGAAGGGGACTCCTTATAGGCCAAAAATGCCTGTGAAGGCTTATATCTTT GCTTTGTTTAATGAGAATTTGAAGCCTGGTCCAACTTCTGAGAGAAACTTTGGACTGTTCAAACCAGATGGAAGTATTTC TTATGATATTGGCTTTACTGGGCTTAGGTCTTCTTCAGCAACCTCGTCTCTTCTTTCCTTCAAGGTACGTGTCAAGTTGT TTTACATTGACTAGAGATACAATCGAATAAGGGTTTATAATGGCTAGAGAAACCCTCTCACAAATTAGTTTTTTTAGTAG AGTTAGGCCATACACAAATTCTTCGAGTATGAATGAATGTGTATGTATATACTTTATGTTTTGACTTTTGGTTAACTTAT TCCAATTGCAAGTTTCTAATGGATGTTGCATTTTTGCAGGGTATTGAGTCATCATTGGTAATGCTCTGTGCAAGTTATGC TGCTCTTCTTCTTGTAGCATTGTAA
CDS sequence (LotjaGi3g1v0356400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCTTTTCAAACATTGGGTTGCATGTCATGGAATTTGTAAACAAGCTTTTCACATTCTTGTGTGGTGCAGTTTCAGG TTCATTCAAAGGAACATATGGAGTAAACTACGGTAGGATAGCAGACAATCTGCCATCCCCTGAAAGTGTGGTTACTCTGC TCAAAGCAGCAAAGATAAAGAACACAAGAATATATGATGCTAATCATGATGTTCTCACTGCCTTCAAAGGTTCAGGACTC GAAATCATCATTGGACTCCCTAACGAATTTCTGAAAGACATAAGCGTGGCTGAGGATCGCGCCATGAGCTGGATCAAAGA AAATGTCCAGCCATACCTTCCGGGGACCAAGATCGTCGGAATCGCGGTCGGAAACGAAATCTTGGGAGGCGGAGATATGA TGCTCTGGGAAGTCTTACTCCCTGCAGCAAAAAACGTTTACAATTCCCTTGACAAGCTTGGTTTAACAAAACAAATTGAG GTATCAAGTCCACATTCAGAGGCAGTGTTTGCCAATTCATATCCTCCATCAGCATGCACTTTCAGAGATGATATACTCCC TTTTATGAAGCCTTTGTTGCAATTCTTCTCACAAATTGGAACTCCTTTCTACATAAATGCATACCCTTTTCTTGCATATA AGAATGACCCTCAGCACATTGACATCAACTATGCTCTCTTCAAGAAAAACCCTGGGATTTATGATGCTAAGACTAAATTG CACTATGATAACATGATTGATGCTCAAATTGATGCTGCTTATATTGCTCTGGAGAAGGTTGGGTTTGAGAAGATGCCGGT GATTGTTTCCGAGACAGGTTGGGCTTCTCGCGGGGACCCAGACGAAGCGGGAGCAAATGTGAAGAATGCGAAGACTTATA ACAAGAATTTGAGGAAGAAGCTAATGAAGAAGAAGGGGACTCCTTATAGGCCAAAAATGCCTGTGAAGGCTTATATCTTT GCTTTGTTTAATGAGAATTTGAAGCCTGGTCCAACTTCTGAGAGAAACTTTGGACTGTTCAAACCAGATGGAAGTATTTC TTATGATATTGGCTTTACTGGGCTTAGGTCTTCTTCAGCAACCTCGTCTCTTCTTTCCTTCAAGGGTATTGAGTCATCAT TGGTAATGCTCTGTGCAAGTTATGCTGCTCTTCTTCTTGTAGCATTGTAA
Protein sequence (LotjaGi3g1v0356400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFFSNIGLHVMEFVNKLFTFLCGAVSGSFKGTYGVNYGRIADNLPSPESVVTLLKAAKIKNTRIYDANHDVLTAFKGSGL EIIIGLPNEFLKDISVAEDRAMSWIKENVQPYLPGTKIVGIAVGNEILGGGDMMLWEVLLPAAKNVYNSLDKLGLTKQIE VSSPHSEAVFANSYPPSACTFRDDILPFMKPLLQFFSQIGTPFYINAYPFLAYKNDPQHIDINYALFKKNPGIYDAKTKL HYDNMIDAQIDAAYIALEKVGFEKMPVIVSETGWASRGDPDEAGANVKNAKTYNKNLRKKLMKKKGTPYRPKMPVKAYIF ALFNENLKPGPTSERNFGLFKPDGSISYDIGFTGLRSSSATSSLLSFKGIESSLVMLCASYAALLLVAL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 15 | 380 | 366 | 9.4E-219 | – | |
| PANTHER | 15 | 380 | 366 | 9.4E-219 | – | |
| Gene3D | 32 | 359 | 328 | 1.1E-123 | – | |
| SUPERFAMILY | 33 | 351 | 319 | 7.03E-88 | ||
| Pfam | 34 | 352 | 319 | 2.4E-88 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi3g1v0356400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…