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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0371500 |
| Transcript ID | LotjaGi3g1v0371500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ubiquinol-cytochrome C chaperone protein; TAIR: AT5G51220.1 ubiquinol-cytochrome C chaperone family protein; Swiss-Prot: sp|Q9W6I0|UQCC1_XENLA Ubiquinol-cytochrome-c reductase complex assembly factor 1; TrEMBL-Plants: tr|A0A151T7M3|A0A151T7M3_CAJCA Ubiquinol-cytochrome c reductase complex chaperone CBP3 isogeny; Found in the gene: LotjaGi3g1v0371500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:76152411..76157268) extracted from Lotus japonicus Gifu genome v1.2.
CCACTTGTTTTGTGCTGTGCTACAGGCTACAGCCCTAGGTGTTTGAATTGTAAAGGCAGCCATAGCCAAGAAACTCACCT GACCTCCCCCATCGTGATTCATCTCAGCTCACTCTTCCTTGGCATCATCGTCAAAACTGTGTGATCGTGATCGTGATCGT GATTGATTCGGAATGTTGCAAAGATGGAGGAAAGCAATCACTCCAATCTCCATCTTCAGATCTCACACTGGTACAAAATT TGCCAACGCCGGCACGCGCCACACCTACGCCAAGGTTGCAGCTGCGCCATTACCGACCATAGACGATGACAAACCTCAAC AACCCCTGGTAACATTCATTTTCTTCCTCCATTATTACTTGCTTCAACTCTGTGAAATGAACTTGTTATCATTTTATGCT GCTGCTGCTTTTACATACAGGTTAACCTAGATAAAATGTTTTGGTCTAAGCCCTGTTCGCTTGCGCTGCCTCGCGATTCG CTGATGAGGGTTGAGGAACCGGATTATCAGGGCATCAAGCGGTTTTTTCTCAGACTTATGCTGTTTTATAGTAAGCAAAG CAGGTCGATTCGAGGGGCTAATGTTGTGTATCAAAGGATTATCTCGCAAGTTGATAAACCTCCCATTTATGAAGGTCCCA TTTCCTCATTCCTATACCAAAATATTTCATATTTGCACCAATTACATGATATGATTATGATTATGATTATGCACGCCACG CGCAAAGACTTACATTAATGCCTTGGTCTTTTATCATTCTGATTGGGAGCTGGGAGTGTCCCCTAATTATTTAGGTTTAC AACTGCAAGTACAACCGCAAGTACAACCGCAAGAACCAAAAGCCAGCGACAGTGGCTGGGGTGCGTGACCAGGGGTAGGG CAGGGGGCGTGAGAGAGCAAGTAGGACAAGGACAGTTAGGAGCAGTTATTTGTTAGTTATATGTTAGGGCCGTTAAGAGA TGTTAATTAGTTGTCGTTACTCGTTAGTTATATGTCAGGGAAGTTAGGAGTGGTTATGTGTTAGTTATGTGCAGTTATGT TTTGTTAAACTGACTATGGGCAATTATAAATATAGGGAGTGTTAGAGATAGTTTAGGATATCAGGGAATTTTGTAGTAAT TGGTAGGTAGAGAACTGGCTCTCGAGCATCTAGAATTTATGTGACTTATGAGGGGAAATTCTCTTGTTTCTATTTCAATC AATTCCAATCTCTTATGTACTTATCACATTTCCACCAATTCACTGTTCTAGGTTGGTTTGGGGTTGTGTAGTTTCACAAT CATTGTGTATCATTTGTCTCAGTAGTTTGAATGAAGACTTTGATATGTTTCTCTGATATTTTACTTGTTAGACATCGGTG AGAAGCTGTAGCTTTTCCTCTCTGCTGTTTTTAATTCTTGCTGACTAGTATTTGGTGGATTTGTGCATGCAATTTTGAAC ATGAATTTCTCCTCCACGTGTATTATGGGACCCGAATTTTCACCTCACTTCCATCTGTTATATGGTTCAATCTTATTTTG CATTTTTTTTCTCTGGTGAATATTTTTAGAGATTTAAGAGATAGTTGTCCAAGTGCCTATGTGTTATGTATTACTTCGGT TGATAATGTTTATTTTTATTTCAGAATATATTTTCTGATTACAAGAGATTTTGATTAAACTAAAATATGTAATTTTGTGG CCATTTGGTGTATTGAATTTGTTGTATTGAATTGCGAAGATGTTATTTCCTCTTTTTGATTTTATCATCTCACCTTTTAA GTTCCAAGTATCTAAGGAAAGACAAGTGAATTCTTGCTTGATAGGAAAAGTTTCACTTTGTCAACCTTGGTGTGTCTCAG GTGTCTGGATATACCACTTTCTCAGATTAGCTGTTTGCAGTTAGAGTCAGTCAACTAATTATTGTGTAGAGTGAGTTTGA TTTGGAAAAGTGATTGTCAAAATAGTGTTAGGTATTGTCACCCTAAACCAAACTCTTCTGCTTGCAGCGTTTAACCTGGA GAAAACATTCAAAACGACATACTCTTTACTTATTCTACATATGTGGTTATGCTTGCGTCGCTTAAAGCAAGAGGGAAACG AGGGTGTTGAATTTGGGCAGTACCTTTATGAGATTTACAATCATGATGTGGAGCTAAGAGTGTCCAAAGCTGGAGTGAGT ATAAAAGATATCATATTTTTACCTTGAATTCCATTTTTACATGTTTCCCTCAAGTTTGAGGACATGTAGGACTTAGTCTC TATTGGTGAATTATGCTCATTTAATTTGAAATTGCAGGTTAACCTACTATTGGCTAAGTGGATGAAGGATCTCGAGAAGA TCTTTTATGGGAACATTGTTGCTTATGATACTGCCCTGCTTCCGGAAGCTAAACCAGTTGATTTCTCAAATGTTATTTGG AGGTAGGTTTTAATCTGAATTCAGTCCTCTTCACTCTTCTTTATACACCTGCTGACAGTTGGAAACTTTTAATCATTTCT TTCTCTGTTTATCTCTGTTTTGGATATTGGGCCAGTGAAGACAAAGTTCTACTGCCTACTTTCTTTAGAAGTCAGTTTTG CTTTATTCGTGGTTTATCCTTATCTTTGGTTTTTATTTTTATTTTCAGGAATATATTCTCTGATGATGGTTCTTCAACAC CAGATGCTGCTGCATCTAAATCAGTGCATGTATGTCTTCTATGTGATGCAATACTTTTAATTATATTTGAAAAAAAATAT TGTGCGTGACTTTTCTAATAGCATGCTTTTGGGAATGTGATCATTCCTGAATAGTCAAGATAAGCCTAGATATTGGACCC AGGGATAACTGGTAAATAAAGTCATGCAACCTATTAACCATTCACCATTCAAGTTAATTTGTTTACCTGACCATTTCCTT TGCTTTGATTAACATTTTGGCTTGGCTTTACTTTTCAAGGATTTTGGCATTTATAATTGGTATCTTTTGACATATTACCG TTATATTGGAGTGTATTTGCCAAAGTAGGGAGCATGTCGTGATGACTTTCATGAAGTATTTTTTTTAAATGTGACTTTCA TGAAGTAGATACAACTGAGTGTAGGATTTTTTCTGTTGCTAGAGCTTCCTGTTGTTTGTATTGATTGCTGATTTGCCTCT TTCTAGAACTGTTTCAAAAAATTACATTTTTCAGCCTATTGAACTCCTGGTCATCACCATCTTCCTTTCCCTTGTTTCCA TTGCCTTTCATTTTACAATTTAATACCTCATGCTTTCTGTTCTTTCCACACTGTTTCCTTATTTCTCTCATTTATATTGT ATACATACACATTGATACTGAATTTTAATTTTTTTTACAGGCAATGGCCAGGTATGCTCGCCGCGAAGTAAGTTGCATGA CTTTAACAGGTAATTCCTGTGTGTTTCTATGTGTGTTATACTGTTGATCTGGACAAAAAATGATTGGCTAATGCTTGCTG CTGTAAACCTGGTGCTAAAGTGAGCTGAAAAGCTCCCTATTACTCTACATGAGTCTTGTTTGAAAACCTGCCCTTAAGAA GTGTTTCAATGTCACAGATAGAAGTATATTTTGCAAGAAACTCAGCTTTAATGTTTATATAAAATTTTGATCAATTTTCC TAGTTTCATAGAAGTTTTTCAATTATTTATAACCATATGCCAGTTATCTATACATATCTAAACTTTCTAACATTACTATT TCATGGACTTCATCCCCACTCTTAGCTAGACAATTTTCAACCTGCATAATTGTATCCTTCTTTTCTTGCGTCTATGATGA CTTTGTTGAGAAGCATACAGAGTTTCCATCAAGTCATTAAATATTTAAATCATGTCACTTCTGACGTCTTAAAGACAGTT ATTTTGAACTCAAATACTTCCTCCATGGTAGTTTTTAACTGTGGAACTATGAAAGAATTCTGAAGATTATATGGATATGT TATCTTTTCTTTTAATGTTGTGGTCTAATAAGTCATGAAATTTGAATTGGCAGATAAAGAAGCACTATATTCAGGGAATT TCATGTTTACCTCTTTGAAGAAAGAGATCAGAAGCGGAGCAGAGAGTGAATGATTAGTAATGATTTCTAAATTCAGGATG AAGTAAATTGCAAATACACGCCGTTCTTTCTTTCGTTACAAAAAAATTGTTCAATAATTATGATAACAGGTTGTGTCTTC CATTACGCTTTATGCTTGCTTAGCTTAGTGTATGAGAAACTAGAATCTTCATACCTTTAAAACAAGAAAAGAAAAGCGCA CAAGTGAATGAAAAATATTGTCACTTCTCTTTCTTATCCTTACTTAATGTTGACAGCTTCAATTATCTGCTTCAGTTTTG TGACACATTACAACACAGATTACAAGTTTACAACCCAGTGCAATATCAACTACTACTATAAAGTGCCTTTCCTTTTCTGT TTCTCATAAGCTCAAATTATTGTAAAAAATGGGGGCTTTTGTGCTTAAGTAATATCAGTAAGTTGGACATTTGGTATGCG ACTGTTGTTTAAATTATCCATTACTTTGTATTTTATAGTTAAAGTTATAGTGACAAATTACACAACAACTTGTATGATTT TCTTGCCTTGTCTATGTCAAGAGCTTCAATGCCATCTTTCTCTATAGCACCTTACTCTATGATACCATCTAACAGCCTCC GGTCACTTTCCTGCTTTATCAGCAGCATCCCCTTGTCAGTGAACTTGTGTTTCATCGATGCTAGAAGTTGTCATACATTC AAGCACAAATTATTCATGACCCTCTTTCAGTCTTTCTTGCGCTCGAAGTGGTCTAGACATTTTATGTGAAATTCTGTAAT TATAACCCCAGGTTGATGTTTGATAATTTTTTTCTTAACATGTTACATGAAATGAAAC
CDS sequence (LotjaGi3g1v0371500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGCAAAGATGGAGGAAAGCAATCACTCCAATCTCCATCTTCAGATCTCACACTGGTACAAAATTTGCCAACGCCGG CACGCGCCACACCTACGCCAAGGTTGCAGCTGCGCCATTACCGACCATAGACGATGACAAACCTCAACAACCCCTGGTTA ACCTAGATAAAATGTTTTGGTCTAAGCCCTGTTCGCTTGCGCTGCCTCGCGATTCGCTGATGAGGGTTGAGGAACCGGAT TATCAGGGCATCAAGCGGTTTTTTCTCAGACTTATGCTGTTTTATAGTAAGCAAAGCAGGTCGATTCGAGGGGCTAATGT TGTGTATCAAAGGATTATCTCGCAAGTTGATAAACCTCCCATTTATGAAGCGTTTAACCTGGAGAAAACATTCAAAACGA CATACTCTTTACTTATTCTACATATGTGGTTATGCTTGCGTCGCTTAAAGCAAGAGGGAAACGAGGGTGTTGAATTTGGG CAGTACCTTTATGAGATTTACAATCATGATGTGGAGCTAAGAGTGTCCAAAGCTGGAGTTAACCTACTATTGGCTAAGTG GATGAAGGATCTCGAGAAGATCTTTTATGGGAACATTGTTGCTTATGATACTGCCCTGCTTCCGGAAGCTAAACCAGTTG ATTTCTCAAATGTTATTTGGAGGAATATATTCTCTGATGATGGTTCTTCAACACCAGATGCTGCTGCATCTAAATCAGTG CATGCAATGGCCAGGTATGCTCGCCGCGAAGTAAGTTGCATGACTTTAACAGATAAAGAAGCACTATATTCAGGGAATTT CATGTTTACCTCTTTGAAGAAAGAGATCAGAAGCGGAGCAGAGAGTGAATGA
Protein sequence (LotjaGi3g1v0371500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLQRWRKAITPISIFRSHTGTKFANAGTRHTYAKVAAAPLPTIDDDKPQQPLVNLDKMFWSKPCSLALPRDSLMRVEEPD YQGIKRFFLRLMLFYSKQSRSIRGANVVYQRIISQVDKPPIYEAFNLEKTFKTTYSLLILHMWLCLRRLKQEGNEGVEFG QYLYEIYNHDVELRVSKAGVNLLLAKWMKDLEKIFYGNIVAYDTALLPEAKPVDFSNVIWRNIFSDDGSSTPDAAASKSV HAMARYARREVSCMTLTDKEALYSGNFMFTSLKKEIRSGAESE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 23 | 275 | 253 | 1.9E-101 | ||
| Pfam | 123 | 268 | 146 | 1.0E-31 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0371500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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