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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0375400 |
| Transcript ID | LotjaGi3g1v0375400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF4378 domain protein; TAIR: AT4G00770.1 DUF4378 domain protein; Swiss-Prot: sp|P78759|2AD2_SCHPO Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta 2 isoform; TrEMBL-Plants: tr|A0A072TQ72|A0A072TQ72_MEDTR DUF4378 domain protein; Found in the gene: LotjaGi3g1v0375400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:76805269..76810058) extracted from Lotus japonicus Gifu genome v1.2.
GAGCCAACATAAGCAAAAAGTGAAGAAAGTTATTATTTAGTGAAAGTAAGAGTGTTATGTAAACTACCTAACATATATGG ATTATATAGACATAGAGATCTCCACCTAGAAGAACCTACCTCATTCCTTCTTCTCCTTCTCCCACACCCTTTTATATTCA CTCTCACACCCTCCAATTCTTCACCAACCACCATAATTTCTTCACCAACTTCCCCTCTTCCTCTCAAAATGAGCATGGAG GTGCAGCAGATTCGAAGGTTCAACTCAATGGAACGCAGGCCCAGAATGCTGAAGGACTTCCTCAGCGACAACCCAAACTC TTCATGCTCCTCAAGCGGCTTCAAATCACTCCCCAGAAAACAACCAAACGCCGTCGTCACAACAGGAACTGAACTCAATT CCTCAAAATCCACCTTCCAAACACTGCTTAACACCATCACCAGCTTCTCCTTCTTCACCGCGGCGAGAAACTCGTCGCCC TCTGTCCTCTCTCTCCCTCGGAGCCTCTCTCGCAAGCTCAGTAGAAGGAGAAAAAGCCGCCAAGCACGAACAGTGAAAAT CAAGGACATCATACGGTGGAAATCGTTCCGGGACGTAGCGGAGGAGGAGGAAAACCTCCACCTCCACCGCCGTTCTTCTC TTCCTACACCGCCACCGCCGCCGTTGGATTTTCACCGTTGCGCGACGGAATCTACCACCACAGTAACCACCACTTGCAGT AGTAGTAGCTGTGGCTCTAGCTGGAGTGACGGTGATTTTTTTACATCTTTGTGGGAAGCGCAAAACTACGACGCCGAAGG CGGTAAAAATTCTTGGTTTTCACCTAATGTTGTCGGCAAGGGTTTGGTGCCACCGTACGCGGCGGTTGTGGGGGCCAAGG TGAGCAATTATCATTTGCATGTGCATCGTATTTTCAATTTGATTTTTTTTTCTTTTATTTATTTTGCAAATTAATATATG GAGAATTAAATAGAATTAATATTTTAATTCAAGTTAAAGCTGTTTTTGTAATTTTTTTTACTATGATAATGAGATTATTA ATTATTTTGCTGATGAGAAAGAGTATGCAATCTTGACAGGAAGATTTAACTTCCCAAGAAGATGAACAACATAGTCCAGT ATCAGTTCTTCATGTTGGAGCAGATGAATTTTCATCCTTTGATCAAAGTCTTGCCAATATTAAAAGTAAGTTCATTCTTT CCCTTCAATTTATGATCTCTTTTTAAGTCCTAATTCATTAATCAATCAATACATTCTTACACCACTCAACACAATTAACA TTTTTGTAAGATTCAACTCAATGGTTTGCATTGGATTTTTCTTATCCATCAATTGGGCTTTCCTATGTATATAGACAAAT CATTGGTTTTAAGCCTTGGTTTTATCATTTTCTTTTGGAATGTGACATGTTGTACTATCAAATTAGGGCTATACTAATAA TATATCCTTCAATTTTGAAACAGGGAGAAAACAAAAGTTTATCCAAACTGTTGAGAAATTTGAAAGTCTTGCAAAATTTG ACCAGTGTCTCTTGTTGGATGAGAACTCTGGCTATGATGAAGAACATGAAGAAGATGATAATGATGATTATGAAGCCCAA AAAGTTGAAGAGCAAGATTGGGTTGAGGAAAGGGCACAGCAGCTACTACTTAGTGTTAGAGCAACAACTAAAAGTTCACC AGTGCAGAGCTGTAAAGACTATTTGGATAGAGTTCTCTTGGATTTCTTCAGGGAAGGACTAGCTGGAAGTAGTAACCAAA ATAGGAGGAATGGTGAGGAGTTTGAGTGGGAGATGTTGAGAATAGCTGAGGTTTGGATAAATGGATCATTTGCTGATGAT GATATAGAGCATGTTAATAAGGATGCTTATATCAAAGGCATGGATAGGAGAAGTAGATGGAGTGGTTTTGGTGAGGAGAA AGAAGAGTTGGCTTTGCAAATTGAGGCAGCTATATGGCATAGTTTGGTTGCTGATCTTGAAGATCTGAATTGCTAAATGG TTTCTCCTTTCCATCTTCAGACCAAGTTCTTGAAGATCTCTAGGCCTTTTGCCACTCTTAAACCGAAATGTTCTGGCCTG CTTACAATGAGACACTGAAAGCCCAAGAATCAGAAAATAGGTCTCTTGCATCAGCCACTGAGATTTGAGACTTAAATGTT TTTTGGACACAGTCTAAATAACACTCATTAGAGCTTATGTACTAGAAAAAACACAGGATAAGCTCTAATAAGTGTTATTT GGTCTTCATCCAAACAGACTCCTACTTACCGTAGAAGAAACAGAGGATCCTACTAACCAAGTTTATAGAGATGTCTTCCT AACTTCCTTGTGGCAACAAGGGACAAAAGTATCATATTGGTGACTTATGAATTCTCTTGATTCTTCAATGAAGGGGTTGT ATTGTAATGTGTACCTAAATTTGATGACTTAGGTGTTGGAGGGTAGTACTAGTAAGTCAAATGATGGATCTCGATCAAGG CATGACTCATGCCTATTCTTGTTAAGGTACAGGTTCTTAAGGAATTCTTTAATTGATTTGTAATTGATATTTAATCAGGT TTGCAAAACTATAAGTGCACTTATGAATTCAAGTTTCAGAAGTAAAAAGAATGTATTTGATATTCTAGAAGGGGATCCCC TATCTCCTTATCTTTTTATTCTTTGTGGTGAGGTGTTTTCTGCACTGATCAATAAGGCTGTATTAGCGTCCTCCCTTCAT GGTATAAAAATTGCTAGAACTGCCCCTGTAATTTCCCATTTGTTGTTTGCAGATGACAGTGTCATTTTTGCCCGAGCCAC GGTACAGGAGGCTCTGTCCATTAAGGCAATTCTTGCCAGTTACGAACAAGCTTCGGGTCAAGTCATTAACCTTGATAAAT CGATGCTCTCTTGTAGCCGAAATGTGCCAGATGATTGTTTTCATGAGCTTAGACAGCTGTTGACTGTAAAGGCGGTGGAG AGCTATGACAAATACCTGGGGCTTCCTACCATCATTGGTAAGTCGAAGACTCAGATTTTTAATTTTGTCAAGGAGCGTGT TTGGAAGAAGCTTAAGGGATGGAAAGAGAGGTCACTCTCTAGAGCAGGGAGAGAGGTGCTTGTAAAAGCGGTGGCACAGG CGATTCCGTCCTATGTCATGTCTTGTTTTTTACTCCCTGACGGGTTATGTAATCAGATTGAGGGAATGATTAGCCGGTTC TATTGGGGCGGGGATGTAACGAGACGTGGTATGCATTGTCTTAGTTGGAAGGATTTGTGCAAGGCCAAGGATAATGACGG ATTTGGGTTTAGAGATTTTAAAATGTTTAATTCTGCTTTAGTAGCCAAAAATTGGTGGCGTATCAAATCCAATCCTGAAT CACTTATGGGGAAGGTTTATAGAGCGGTTTATTTCCCGTGAGGCACGATCCGTGGGGCTAAACGTGGCTATCGCCCGAGT TATGCTTGGTCTAGTATTATGCGATCTGGTGAGATCTTTGCAACTGGGGGTATGTGGAATATTGGTAATGGTAAAAGTGT TAAGGCTTGGTCAGACAAGTGGGTTCCAGGGACGGATACACTGGTGTATAGTGTGGAGCTTGCTCAACATTTTGGAGTCT CTCTTGTGTCTGACCTTATGCTGCCGGGCTTGCTGGCATGGAATAGGGAGCTTATCAATTTTATTTGTTGTCCGCCGACG GCGCGAGCGATTATGGCAATTCCTTTGCCTCTTGTCCCTCATGATGATGTTCTGTATTGGCCTTTCTCTTCAGATGGTCA TTACTCGACCAAGTCAGGTTACCAATTCCTACGCCACAGCGCTGAAGCTGTTGTTGCGTCTTCTTCCCAGGTTCCCTCTC TTCCGCGTGCGGATTGGAGGAAGCTTTGGAAAGCTGATGCGCTCCCTCGATGCCGTGAGACGGGGTGGCGGGCGTGCCTT GAGGTCCTTCCGGTGAGAGCCTACCTTCATGCGCGCGGTTTGGTCACGGACCCGACGTGCCCGCGTTGTTTGGTAGCTCC GGAGACGGTCCAACATGCGTTGCTCTTTTGCCCGATGGTGCAGCCAATTTGGTTTGCCAGCTCTCTTGGTTTCCGCCTAG CTCATGAGTGCCGAGTGCACGAGTTTGTTTCTGATTTTATGCAGGTTGCAGACATGTCCAGCCTTGGAGCTTTTCTCACC TTGCTGTATGCGATTTGGATGGCCAGAAATGAGCTATGTTTCAAGGAGAAGGCTTCAACGTTGGAGCAGATTTTGACCCA TGCAGCTTCACTCACACCGCTGCCACCTTTGGAGGGTCCTATGGTTCCGCAAGTTCACCGTCCCAACACTTGGTCCCGTC CACATCCGGGCACGTTCAAGATCAATTTTGATGCGGCGATGGCTCCTACCGGTGACGCAAGTTTCGGTCTTGTTGCTAGG AATTCTCATGGTGAAGTGTTGGCAGCAGCGTGCTCCTCGCATGGTCCAGCAGCATCTTCTTTGTTAGCGGAGGGGCTCTC TTTCCGTTGGGCGCTCGGTTTGGCTATGGATCTTGGTTTCCGGCGCGTCGTGTTCGAGACCGACTGTCTCCTTCTTTATG AGGCGTGGAAGCGCCGGGGTGGTTGCTCTATTTTAGACTCTTTGATATTAGATTGTCGTCGTTTGTCTTCTGGTTTTGAT GCTTTTGATTTCAGTTTTATTCGCCGTACTGGCAATAGTGTCGCTGATGCTTTAGCTAAGCGTTCTTTTACTTTGGGTGT TTGGGTTTGGATTGAGGAGATCCCTCAAGACTTTTATGGCTTAGTCCAATCTGATGTAATGGCCTCTGAG
CDS sequence (LotjaGi3g1v0375400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGCATGGAGGTGCAGCAGATTCGAAGGTTCAACTCAATGGAACGCAGGCCCAGAATGCTGAAGGACTTCCTCAGCGA CAACCCAAACTCTTCATGCTCCTCAAGCGGCTTCAAATCACTCCCCAGAAAACAACCAAACGCCGTCGTCACAACAGGAA CTGAACTCAATTCCTCAAAATCCACCTTCCAAACACTGCTTAACACCATCACCAGCTTCTCCTTCTTCACCGCGGCGAGA AACTCGTCGCCCTCTGTCCTCTCTCTCCCTCGGAGCCTCTCTCGCAAGCTCAGTAGAAGGAGAAAAAGCCGCCAAGCACG AACAGTGAAAATCAAGGACATCATACGGTGGAAATCGTTCCGGGACGTAGCGGAGGAGGAGGAAAACCTCCACCTCCACC GCCGTTCTTCTCTTCCTACACCGCCACCGCCGCCGTTGGATTTTCACCGTTGCGCGACGGAATCTACCACCACAGTAACC ACCACTTGCAGTAGTAGTAGCTGTGGCTCTAGCTGGAGTGACGGTGATTTTTTTACATCTTTGTGGGAAGCGCAAAACTA CGACGCCGAAGGCGGTAAAAATTCTTGGTTTTCACCTAATGTTGTCGGCAAGGGTTTGGTGCCACCGTACGCGGCGGTTG TGGGGGCCAAGGAAGATTTAACTTCCCAAGAAGATGAACAACATAGTCCAGTATCAGTTCTTCATGTTGGAGCAGATGAA TTTTCATCCTTTGATCAAAGTCTTGCCAATATTAAAAGGAGAAAACAAAAGTTTATCCAAACTGTTGAGAAATTTGAAAG TCTTGCAAAATTTGACCAGTGTCTCTTGTTGGATGAGAACTCTGGCTATGATGAAGAACATGAAGAAGATGATAATGATG ATTATGAAGCCCAAAAAGTTGAAGAGCAAGATTGGGTTGAGGAAAGGGCACAGCAGCTACTACTTAGTGTTAGAGCAACA ACTAAAAGTTCACCAGTGCAGAGCTGTAAAGACTATTTGGATAGAGTTCTCTTGGATTTCTTCAGGGAAGGACTAGCTGG AAGTAGTAACCAAAATAGGAGGAATGGTGAGGAGTTTGAGTGGGAGATGTTGAGAATAGCTGAGGTTTGGATAAATGGAT CATTTGCTGATGATGATATAGAGCATGTTAATAAGGATGCTTATATCAAAGGCATGGATAGGAGAAGTAGATGGAGTGGT TTTGGTGAGGAGAAAGAAGAGTTGGCTTTGCAAATTGAGGCAGCTATATGGCATAGTTTGGTTGCTGATCTTGAAGATCT GAATTGCTAA
Protein sequence (LotjaGi3g1v0375400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSMEVQQIRRFNSMERRPRMLKDFLSDNPNSSCSSSGFKSLPRKQPNAVVTTGTELNSSKSTFQTLLNTITSFSFFTAAR NSSPSVLSLPRSLSRKLSRRRKSRQARTVKIKDIIRWKSFRDVAEEEENLHLHRRSSLPTPPPPPLDFHRCATESTTTVT TTCSSSSCGSSWSDGDFFTSLWEAQNYDAEGGKNSWFSPNVVGKGLVPPYAAVVGAKEDLTSQEDEQHSPVSVLHVGADE FSSFDQSLANIKRRKQKFIQTVEKFESLAKFDQCLLLDENSGYDEEHEEDDNDDYEAQKVEEQDWVEERAQQLLLSVRAT TKSSPVQSCKDYLDRVLLDFFREGLAGSSNQNRRNGEEFEWEMLRIAEVWINGSFADDDIEHVNKDAYIKGMDRRSRWSG FGEEKEELALQIEAAIWHSLVADLEDLNC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 427 | 425 | 3.2E-115 | – | |
| PANTHER | 3 | 427 | 425 | 3.2E-115 | – | |
| MobiDBLite | 23 | 45 | 23 | - | – | |
| MobiDBLite | 25 | 45 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0375400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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