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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0378200 |
| Transcript ID | LotjaGi3g1v0378200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BON1-associated protein 2; TAIR: AT2G45760.1 BON association protein 2; Swiss-Prot: sp|Q58FX0|BAP2_ARATH BON1-associated protein 2; TrEMBL-Plants: tr|A0A1J7HJZ9|A0A1J7HJZ9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0378200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:77080229..77081302) extracted from Lotus japonicus Gifu genome v1.2.
AAAGAAACAAACAAGAAAGTGCCTGGAAATAAGAAGGAAATAGAAGAGAAAGTGCGTGAAAATAAGATAACTTTAGGATA AGAAAATACTACCACGCATATCATTATTTATTATATATACCACGCTTCCAAGTGATTATTTACTACCTAAATTTCACCTA ATATTTCCTAAACAAACTTCGAATCTGAATTCTCTGCTTCAATGGAGATCACCAAACCAAGGACCCTAGAGCTCACGATT TTATCAGCGGAGGATCTCCGCGTCGACCGAAAGCCGGCGACGCGGGACGTCTTCGTGGTGGTTCAAGCGGAATCCACCCA CGCCACGGCAGTAAGCGGCGACGAATACGGCGGAGGATTCCACTCATGGAACCAGAAATTCTCCGTGAATTTGAACATGA ACACGAAGTTCATCACGTTCGAGGTGAACTGCAAAACGAGATCTGGATCGGTGAAGGACATTGGTGTGGTGAGGATTCCG GTTTCGGATTTTCTTGGAGGTTTGGTTCCTGACACGTTCTTGCGGTTTTTGAGTTACAGGTTGAAGGATCGGTATGGGAA TCCCAACGGGATCATCAATTTCTCCGTCAGGGCGGTGTCGCCTGGTGGAAAGAGTGGTGGTGGTGGTTCGACGGCTGTGG ACAAGGTTGATGGTTTTTCGGTGCCGGCGGCGGCGGCTGATAAGATTGGCGGTGGTTCTTGTGGTGGTTCTCAGGTTCCG GCGGGTGGAGTGGTTACCGGCATTCCCGTTTCGTGGAATCACGCTAAAAACGTTTGAATCTGATTACAGAGAGATGAAGT TGGTTGTTTGATTGATTTGTTCTTTCTTTCCTTGGGTGCCAAGCAAATTAACTGTACAGTTTGGAAGGGATTAGGGTTTT AAATTTGATTTTTAGATTGATGTTACTGAAAAATATTATTCCACAACAGTTTGAATTTTAAGTATTTTAAGTATCATATG TCATGAGATTAGTTGCGAGTTCGAGACTAATATGTGGTTCATTCGAGTGATTAATGCTACCCAGGACTGTGATTTGTGAA TGTCTTTGCTGAATAACCATGACAATTAGGCAAG
CDS sequence (LotjaGi3g1v0378200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGATCACCAAACCAAGGACCCTAGAGCTCACGATTTTATCAGCGGAGGATCTCCGCGTCGACCGAAAGCCGGCGAC GCGGGACGTCTTCGTGGTGGTTCAAGCGGAATCCACCCACGCCACGGCAGTAAGCGGCGACGAATACGGCGGAGGATTCC ACTCATGGAACCAGAAATTCTCCGTGAATTTGAACATGAACACGAAGTTCATCACGTTCGAGGTGAACTGCAAAACGAGA TCTGGATCGGTGAAGGACATTGGTGTGGTGAGGATTCCGGTTTCGGATTTTCTTGGAGGTTTGGTTCCTGACACGTTCTT GCGGTTTTTGAGTTACAGGTTGAAGGATCGGTATGGGAATCCCAACGGGATCATCAATTTCTCCGTCAGGGCGGTGTCGC CTGGTGGAAAGAGTGGTGGTGGTGGTTCGACGGCTGTGGACAAGGTTGATGGTTTTTCGGTGCCGGCGGCGGCGGCTGAT AAGATTGGCGGTGGTTCTTGTGGTGGTTCTCAGGTTCCGGCGGGTGGAGTGGTTACCGGCATTCCCGTTTCGTGGAATCA CGCTAAAAACGTTTGA
Protein sequence (LotjaGi3g1v0378200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEITKPRTLELTILSAEDLRVDRKPATRDVFVVVQAESTHATAVSGDEYGGGFHSWNQKFSVNLNMNTKFITFEVNCKTR SGSVKDIGVVRIPVSDFLGGLVPDTFLRFLSYRLKDRYGNPNGIINFSVRAVSPGGKSGGGGSTAVDKVDGFSVPAAAAD KIGGGSCGGSQVPAGGVVTGIPVSWNHAKNV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 3 | 107 | 105 | 4.3E-7 | ||
| PANTHER | 5 | 186 | 182 | 1.8E-48 | – | |
| PANTHER | 5 | 186 | 182 | 1.8E-48 | – | |
| SUPERFAMILY | 6 | 133 | 128 | 2.46E-10 | – | |
| CDD | 8 | 127 | 120 | 3.28507E-35 | – | |
| Pfam | 8 | 99 | 92 | 3.9E-8 | ||
| SMART | 8 | 106 | 99 | 5.1E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0378200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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