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Field | Value |
---|---|
Gene ID | LotjaGi3g1v0387300 |
Transcript ID | LotjaGi3g1v0387300.1 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Heavy metal transport/detoxification superfamily protein; TAIR: AT1G01490.1 Heavy metal transport/detoxification superfamily protein; Swiss-Prot: sp|O03982|HIP39_ARATH Heavy metal-associated isoprenylated plant protein 39; TrEMBL-Plants: tr|I3SX72|I3SX72_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0387300 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:78352876..78358530) extracted from Lotus japonicus Gifu genome v1.2.
TCATTCTTCCTTATTTGTATTGAGATTGAAGTACCCCTTGTACTTCTTTTCAATATAATTCATATTGTTTATTAAAAAAA AAATGTGGTAGCAGCCCTTGACCAGCCAGTCAAACTCTTACGCCCTGCTACGTTTGTTGTGCTCACAGAATGCTGCTTCG TCATTGCTTCGCAATCAATGTGTATAAGGTCTCATTCAAAAGCCAACAACTCTCCACCATTTTATATAAAACATATATAA TACTCTGCTTACTTCTATAATTTCCCAATAGATCATCTCTTCTTCTCAAGACACTCATTCACATCTTTGTTTGATCTGCA TAAAATTGAATAACATATTAAAGAAATGAAGGTATGATTCATCACACTTTCCAGTTTTTGGTTCTTCACTATTCTTTTTT CTTTGCTCAGTCACTTCTTGGCTTTGATTCCTTGTTGATTCTCCATGAGCTTTAATTATCCCCTCATTTTCTCTCTCTTT TCTTTCATGTCCCCTGTTCAACCCCTCCTTAATTAAATATCTGGTGTGGTTAGAAATTAATTTTGATATAAATCAGAACC CTGGTTTTGGATTTGTTTTGAACATCTGGTCTACATGTGAGAGATGGTTTATATTTCATCAAGAGCTTTCTGTTTGGTTG AGAAATTTTGGTTTCAAGTATCATTTTTTATGTATTTATTTAGGCTGGTTCAGATTAATTGAGTTTTATTTGAATCTGGG TTAATTAACATCAGTTCCTGATTTTTGTTACAGAAGTTTGTGCTCAAGTTAGATTTGCATGATGACAAGGACAAGAAGAA GGCCCTGAAAACAGTTTCAACTCTGACAGGTACCAATTCTGTCATTATTTTAGCCTCACTTTGGATTTTTCTTCCACTGA ACTCTCTTAATTTGATTGGATTAGAGGAAGTGAAAAATGAGCAGTGGTTAGTTTTGATTGGATTGGCCTCCTTCACATTT TAAGTTCTAGTTGATTTTTTTGCTAATCTTTCCTTGGAATCAATTTTGAATTTCTGATGCTACTCATACAAGCTTCTTCT CAGAATTTATTTTGGTTTTAGAATCAGCCATAGAAGAATTTCAAACACACACTTATTTTATGTTTGAAGTTATAGTTGCT AATTTTTTTTTCTTTGCTACAGCAATTTCCAGATAAAGAAACACATTTGTTCTCTCCAAGTTTTCCTTTTTCTAAAGTAA TTTTGAAATCAAAAAAAATCTGAACAATCTAATTGTGCAACCTATTAGGTATTGATGCCATCTCCATGGACATGAAAGAG AAGAAATTAACAGTGATAGGAACAGTGGATCCAGTTACTGTGGTTAGCAAATTGCGCAAATACTGGCAGACAGATATAGT AGCAGTAGGACCAGCCAAAGAGCCAGAGAAGAAGAAAGAGGAGCCCAAGAAAGAAGAGGCCAAGAAGGAAGGAGAAAAGA AAGAGGAACAGAAGAAGGAAGAGGGGAAGAAGGAAGAATCAAAAAAAGAAGAGAAGAAAAAAGAACCTGCCCCAGATCCT GTTTTGGAGCTGGTCAAGGCTTACAGGGCTTATAATCCATACATGACCACACACTACCATGTACAAAGCATGGAAGAGAA TCCCAATGCCTGTGTCATTTGTTGAAGAGCATGCTTTCCAAACATGGGATTTGGATTTGGTGCTGTCAAAAATGCGTGCA GTCACGTCAGTCATCAAATCGTCTGATTTTCATTTAACAGCTCTGATTTACTGGCTGTAGTGACTGCACCATATTTGACT GCAGCTAATTCAGGTGTCCAACCATGAGGGAAAGATAAACTTTTTCAACATGGTAATAGATATCCAACTACTTGTATATA ATATGGTGGTGCCTTGTTGAGTTGAGACATTATTAATATGTACAGAGAGAGAGAGGGAATAAAGTTTTGAGAGAATTTAT TATTTGATTGTATCAACTACTAGAATTAGTAATTTGTTTGTTTTAACTATTGTTTGGAGAAAATGGAAAGGCTGATTTTT TATTTGTTTTCATCCTCAAGTCTCAACTACTCAAAACCATACAAAGTTAAGAAGTAGCACTGTCATGTCCTTCTTGTGGG ACATGGAGGCTGAAAATTTAAAAGCATAGTACATAATCATGAGGTTGAAACTTTTTCTTTCTTTTAAAGCTCTGTTGTCT TCCTCTGCAATTTGTTGTACATATGTGGAGTGAAAGCTATGGGAATCATGGGACTGATTGGTCCCTGAGGTACACCTATA CCATTATATGTGATTTGAGCCATAATTGGCCTGTCATGATTACCATCATTCTTTTTCTAATGATACTCATGAGCTAATTT ACCTTCGCATCATCATACCAATCTTGTTCAGAAGAAATTAGCTAATAATGGAGTATTCTATTCAAATATTGTTTGCTTGG GTTTTTTTGGGCACATGAAGTTTCTTTGATTATTATGAAGATGTCCATGTCCTTGTATTGGATTTGTACTCATTTTCTAA TACATGCATTACTTAGTGATGTACAATCAAAGTGACTCCCCGCCTCACTCTCAGAAACTTTTTGTTTCTTCTGCATCCCA AAAGACAAATTTTATCTGCATATGATTATTATATATGTAACCTACCAATACAAAAGAATAAAGTTAATTCAAACTAAAAA AAACACTTACATCTAGTGAAAGATAATAAGAGAAAAGAAAAATAAGAATAAGATAAATGATGAGTGATATGATAGAGAAA GAAGAAAAATAGAAAAATGAAGTAAATAAAAATGAGATAGAAGAGAAAGTAATGTGTGGATGAACCAAAAAACCAAATAC AAAATCCGATACCTCAGCCTATCTGCCTATTGCCTTAGTTGATTTACGAACAACAGTCATCTCTAAATATTGTTCTAACT AACCATGTTCCACCAATAAAATCCTCAAGGATTAGAAAGACACCCACACAAGCTTTTATCATTGAATGCTAGCCACCTCA TCCACACCCACAACTTCACCATCATCAAATGCATCATCAAATGTCAGGAATCCTAGCTCATTGATTAATGAATTTAATAA GTGTCAAATTGTTATAAAGGTAGCTTAGATGACAATGCAAACTAAGAGTATGAGAAGAACTTTTGCGTTTCATTCCTGCA GAATACACATGGAGAGGGATGAAGAATTTTTAACTTTGACTAAATCCCGAATCTCGAATAGTCGGCGGGTGAATGAATAC TAAATGGTTTATAATTAAAAAAAGTGTTCAGAGTCTCATTGATTTCCAATTAATTTGCAGGATTGACAAGTTCTAATATG GCTACATGATTCTTGCGGGAAAAGAAGCAAAATTTAACAAAAACTGGCACATTTGAGTCTACTTTGGATAACAATGTGGC CTAATGCATTTTTGACCGGGAACAAAATGATATTTCAAATATCAAAAATATCATTGCCCAATATTGAGTGGCCCAAAAGA ACAAAGTTGGGAAGTACACTCAATGTTTATATTCAAGATCTATTTTTGACCAAAATAAAAATTCAAGATCTATTACCAGA TAAAAAAAATCAACTGTTAGGTCTATTACCATATACTATTACCCAAATGAAAAAAAAAAACTATATCTATTACTCACTTG AAAATCTGGTACTCCTTTTCCTTTACTGAGTTTTTATCCCTATGAGTTTTTCCTATTAAGGTTTTAATGAGAGTATGACA CCATAGAGGGTTTGGTTGTGATGTTTGGGGTTATTTTGGTTGTTCTTACTTCATGAGAGGGTGATGTTTCTTCTTCAATA ATATAATATATTTTGCTTTATAAAAAATGTTTTAAATGAGCGCTTTATGTTTATGCTGCATGGGAGAGGTTCGATATTTT GGCATTCCATTCAAAGGGGTCGTGATTGTTTGTGAGATGGTTTCAATTTCAATCTTGGCAATTGTTTAATTTGGTGTCGT TTTGGATCGATCACTGCCTTGGCCAGCAGAAGCTGGGGAATCAGGTTGAGTTTATTAACTTTAATCACATTTCCTTTGAT TTCTAGATGAATTTCACAACTCTTAATTACAAAAATTTAAGCAACCAACGTCACTGATGATGATATTAGCCCTTGACTAG GTGATATGGTCAGTCAGTGGGTGATTAATCTTTTCCAGCACAATCATTTCAAGTACAACATTGTAAACAAAAGTCTAGGC AAATCATCCTAATCAAAAACTTTTTGGGGTTGGGGGAGAACCCGAGAAGGAAGAAATAGAGTGGTATGAAGCAAAGTTCA AAACGATAAAAACAATACAACAAAAAGAGAACACAAATTAAGAAGAACAAACAGCAGAAAAAATAAAATAATGAAATAAG AGTGCATGTGAGGGATCTCCTTCAGTTTGAATTAATGTTTTGTTGGGATTTTTAGTGTCAAAAGCATGTTCTGTTGTCCC TGTTGAGTATACGTGCAAGATATAAATGCAACTAAATTAACTTCAACATACACACAAGTCAAAGATCAAGCACAAAAACA ACGTAGGATTCTTATCCTACCTTAAGGATGGTGTTTCCAACGGTCTCAGCACACCTGATGATTGATTTTTTTTTAAAGCC AAAATGAATAAAAGAATGGTAACACTTAGACTCCATTTGGTAGAGAAGAGAGTAGAGAAGAAAGAAGTTGAGTAGAGAGA AATATATGAAAAATATAGTAGATTTATTGAGTTGTTTAGTATGGTAGAGATAAAGAAGAGAGAGATGAAAAATAATGAGG TAGAAAAGAGAGAAAAAAAATTTGATTAAAAAATCATATTTAAATGCAAAAAAGTGAAAAACCGGATGCAAATAGTGGTG GTTTTAAACCGCCACCAATTACCAGAAACGAAAAAAAAAAGAGCCAACCCCTATCTCTTCGCAATTTTCCCCTTTTGCGA AGAGATTTAAAAGGGGAAAATCTCATCCCCAATCTCTCTCTCCCCTACCATTAATGCTAACCAAACAAGATAACTTCACC CATCTCTCTCCTAACTCTCTCTTGCATCTCTCTCTCTCTTCTATCTCACCTTTAACAAACAAAGCATTAGGGGGTGTTAC AACCCACAGTACAAGAGCCAAAGAAAAGCAAAAATAAAGCCAACCCAAAGCAGAGGGAAAAACAAAGCTGATTGGTTTTC ATCTATGATGTGGCCCATCACTTTGCGAAACTGATTTGCAAGAATCTTGGATACAATTTTATACATACACCCAATCAAGG AGATAAGGCGATAATAATTCAAACTTGAGGGATTAGGTACCTTTGGGATGAGAGTAAAGGAGAGCACATTGGAAGGAGCA TCAATCTTCCACATCTTTTTGTAAACTGGATTAGTCTCCAAAGGTGTTGGCCCCAAGAGGAATTCATAGGCTGATTTAAC GGAGAATAAGCCGTCAGCAGAAGCCCCCCAGACCCAAGCATCCTTTGCCCCTCGCTTCAATTTTGCAGTCCTTAGGTCCC TCAGCAAATTTTCCAGCAATGAACTTTCCCAAACAAACAGATTTCTTCTCCAAGAAAAATTCCAGCTCCATGAATCATCT TCCCATCCTCCCATTTGCTTTCAGGAACACTTATGCTGCATGGAAATATCATACAGTCTTTTGTATTTTTGTTTAAGGCA CTCCTCTCCCTCCAACCATCTTTCTTCCCAAAATAGAGTTGAGCCTCCCTCTCCC
CDS sequence (LotjaGi3g1v0387300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGAAGTTTGTGCTCAAGTTAGATTTGCATGATGACAAGGACAAGAAGAAGGCCCTGAAAACAGTTTCAACTCTGAC AGGTATTGATGCCATCTCCATGGACATGAAAGAGAAGAAATTAACAGTGATAGGAACAGTGGATCCAGTTACTGTGGTTA GCAAATTGCGCAAATACTGGCAGACAGATATAGTAGCAGTAGGACCAGCCAAAGAGCCAGAGAAGAAGAAAGAGGAGCCC AAGAAAGAAGAGGCCAAGAAGGAAGGAGAAAAGAAAGAGGAACAGAAGAAGGAAGAGGGGAAGAAGGAAGAATCAAAAAA AGAAGAGAAGAAAAAAGAACCTGCCCCAGATCCTGTTTTGGAGCTGGTCAAGGCTTACAGGGCTTATAATCCATACATGA CCACACACTACCATGTACAAAGCATGGAAGAGAATCCCAATGCCTGTGTCATTTGTTGA
Protein sequence (LotjaGi3g1v0387300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKKFVLKLDLHDDKDKKKALKTVSTLTGIDAISMDMKEKKLTVIGTVDPVTVVSKLRKYWQTDIVAVGPAKEPEKKKEEP KKEEAKKEGEKKEEQKKEEGKKEESKKEEKKKEPAPDPVLELVKAYRAYNPYMTTHYHVQSMEENPNACVIC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 152 | 152 | 1.1E-70 | – | |
Gene3D | 1 | 67 | 67 | 8.0E-17 | – | |
PANTHER | 1 | 152 | 152 | 1.1E-70 | – | |
SUPERFAMILY | 1 | 58 | 58 | 3.14E-5 | ||
Pfam | 9 | 58 | 50 | 9.5E-7 | ||
MobiDBLite | 67 | 120 | 54 | - | – | |
MobiDBLite | 69 | 118 | 50 | - | – | |
Coils | 82 | 113 | 32 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Biological process | Metal ion transport | The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of LotjaGi3g1v0387300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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