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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0393800 |
| Transcript ID | LotjaGi3g1v0393800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Abscisic acid receptor; TAIR: AT1G01360.1 regulatory component of ABA receptor 1; Swiss-Prot: sp|Q84MC7|PYL9_ARATH Abscisic acid receptor PYL9; TrEMBL-Plants: tr|I3SN57|I3SN57_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0393800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:79287070..79290086) extracted from Lotus japonicus Gifu genome v1.2.
GTTGAAATTTTGATCACTGTTGAACTAAAAAACGAATAAAATAACTTCATTGTCGGTGGATTCATGAATTTTGATAAACT GCCAAGCTAAGCATAAGGGTTGACACTTTTTCACACCAACTACTCTCTCTCTCTCTGTAGCCAAAGCTTATCCTTCTCCA CTTGTTGTTGTTGTTGTTGTTGTATCTTCTAGAGGGAGAGAAGCAGCATCAACCATAAGAAAAAAGAGCTCAGTTTCTGA GAGGTAGAAGAGATGAATGGTGATGAACCTTACAGTGCTATTGAGTCACAGTACATTAGGAGACATCACAAGCATGAACT CAGGGACAATCAGTGCACTTCTGCACTTGTCAAACACATAAAGGCCCCTGTTCATCTTGTTAGTTTTCCTTCTTCTTTCG ACTTGTTTTAATGGATTTTGTTTCTGAATTGGAGTTTTCTCGTTGATGGGTCTGGTTTATTTGTTGGAAAGATTGTTTCT TTGTGAAAAAAAATTGATTTTTAGTTCTTGTTCACCTTCCTTTGAGGACCTGTTCTGTTTTGCTTGTTTATTGGTACTCT GTTTTGTTTTCTTGTATTGTCTTTCCCGTCTGGGTGTGTGAGTCATGGCTTTTGCTTTGGATTTGGTCTCTTTCTTGAGG GTGGATCTTCAATCTTGTTTTCAGATTCTTTAAGGGTATACAAAAAAAGGTTGAACTTTTCAGCTGTTCTGATTGGTTTG TGGTTATGAAATCAGTTTGGAGATTTCATTCGAATTTTCATGTCACTTTCAATATTTGGAAGATCAAAGCTTATTAGTCA ATTTTACAAAATTATCTTCCAATTCTAGTCTCTGTTTGACATTCAATTTATGCTGTGTCATGAAATTGATGAAAGTTCAT GTGATGCCATGTTTCATTATTTGGTGAATTTTGTGGGAGAAGATAAAAAGATTGGTTTTTGATTGATCTTATTGGTGATT TTCACTCTTTCAGGTGTGGTCTCTGGTTAGAAGATTTGATCAGCCTCAGAAGTATAAACCATTTGTGAGCAGGTGTATCA TGCAAGGAGACCTTGGCATTGGAAGTGTTAGAGAAGTGAATGTTAAATCTGGTCTTCCAGCAACAACTAGCACTGAGAGG TTGGAACAGCTTGATGATGAGGAACACATCCTTGGTATCAGGATTGTTGGAGGTGATCACAGGCTCAGGGTATGAATGGT CCATTTTTTGTTCCTTATTTGAATTTGACTTTGAGTGAGAGAAAAGAATACATGTTTTGTTTTCTTGTTAACAATTGCAT TCCAGAACAATTTGGTATTCTTATTTGATATGTCACATATGTGGACTATGTTTTAAGCAAATTTATTCAGGGCTTGTGTA CTGTAGAGGAAGCATTCTCATATTCCCGAATTACAATGCTTGGATATTTGTTTGAAGTTGCATGATATGCTCTCAGTAGG CTAACTATAAGTGTGTTAATTCATTTCCTATGATATGCACTCAGATGTATTTGCTTAGCTCTAAATCTTGTATGTGGAAT TTGCAGAACTATTGTTCCATAATCACTGTCCATCCGGAGGTCATCGATGGAAGACCCGGTACCATGGTGATTGAGTCATT TGTGGTGGATGTGCCTGAAGGGAACACCCGAGATGAAACTTGTTACTTCGTGGAGGCTCTGATCAGGTGCAACCTAAGCT CTTTGGCTGATGTCTCAGAGAGGATGGCCGTGCAGGGTCGAACCGATCCGCTCAACCATTAAGCATGTCTAAGGGAGAGT GAAGTGTTGGGTATGTGATCCATTGCATTCATTCTGCCCAGTTCAAGTGTGGAGATTGGTTGGATTAGTCCTTCCGTGTT CCCGAAAGTTTTGGATGTTCATTTTCCTCTTATCGTGGACACCTTCCCTGCAACCATCCTCCTACAATTTTAGCTGTGTA TTTCTCTTTTGAACAGCTGAGTCTCTCTTCTACAGTTTTTGTAAGATGAGATTCTGGATTTCAAAAGCACACAGGGATGG GAGTGGGGGAAGTTGTTTTTTACTGCTAAATTCTTCCTGGTGGTGTGTTACTACAGTTATTTGTAAATATTTTTGTTGGA AAAAAAAGACATTTCTGTAGTTTTTCATGTTTAGTGGCAACTAGAAACTATTATGTGCTGGTGGGAGAGGTCCCCAAACA GTAGATAGTACTGCCTTGTTACTTTGGTTTACTTTAAGTAATGTTGTACTTTTTGTAAGTTATCTATTCCAAATTCTTCT TGTTTTAGAACACACAATCAATTTGATTTTGCTTCTAGTTATTAGAAGGCATCACCATGCACAGGAACTTCTAAGATAAG CTTTTTATTCTTCCAAATACACACTTCAGATGGCTTGAGTTTGGAAACTTGGTAGGTTTTCATATTTGAGGGAAAAGTGA TTTTGACAGAAGCTGCTATGAGTAGCTTTTGTGGAGCGAGAATTAATGCTGGCAGGATTAAAAGTGAATCTGAAATTACT TTCCAAGTGCTTTCAAATTCAACCTGTTCTTCTCCTTGAGTTATGAGCAAAATATATGCTAGTCAGAGGGAAAAAAAGGG GTTTAAAACAACCGGTGTATCATTGTATTCTGGAGGCTTCACTACTGTAACACAGGAACTGGAAGGACATTGTAAAGGTG TAAGGAAAAGGAAATTTCACATACTTGACACGAACAAGAAAGGTTAAAGTGTTGCCAAAGGGATGTCTAAAGAAGCAAGT AAGGAAAATTATGCTAGTGAGGAGAATGAATTTGCAAGGAAATGGATTTTTCTCATGTACTTTTTTTCCTCATCTGTAAT GAGTTACTGACATTTTTGGTTTTGTAAGACATTTTTTCCAACTAAGCAAATATGTTGGATTGAGAAAAATCACATTCACA TTCAATTCAATGAATAAACAAACACACCAACTTGCAAAACTTGGTTTTGGCTCGAGATGTGGGTATCTAGTATCTACATA TGCAAACACAGATTAAGTAACATGTTTACCTGATGTGAGACAAATTTCTGCATATTA
CDS sequence (LotjaGi3g1v0393800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATGGTGATGAACCTTACAGTGCTATTGAGTCACAGTACATTAGGAGACATCACAAGCATGAACTCAGGGACAATCA GTGCACTTCTGCACTTGTCAAACACATAAAGGCCCCTGTTCATCTTGTGTGGTCTCTGGTTAGAAGATTTGATCAGCCTC AGAAGTATAAACCATTTGTGAGCAGGTGTATCATGCAAGGAGACCTTGGCATTGGAAGTGTTAGAGAAGTGAATGTTAAA TCTGGTCTTCCAGCAACAACTAGCACTGAGAGGTTGGAACAGCTTGATGATGAGGAACACATCCTTGGTATCAGGATTGT TGGAGGTGATCACAGGCTCAGGAACTATTGTTCCATAATCACTGTCCATCCGGAGGTCATCGATGGAAGACCCGGTACCA TGGTGATTGAGTCATTTGTGGTGGATGTGCCTGAAGGGAACACCCGAGATGAAACTTGTTACTTCGTGGAGGCTCTGATC AGGTGCAACCTAAGCTCTTTGGCTGATGTCTCAGAGAGGATGGCCGTGCAGGGTCGAACCGATCCGCTCAACCATTAA
Protein sequence (LotjaGi3g1v0393800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNGDEPYSAIESQYIRRHHKHELRDNQCTSALVKHIKAPVHLVWSLVRRFDQPQKYKPFVSRCIMQGDLGIGSVREVNVK SGLPATTSTERLEQLDDEEHILGIRIVGGDHRLRNYCSIITVHPEVIDGRPGTMVIESFVVDVPEGNTRDETCYFVEALI RCNLSSLADVSERMAVQGRTDPLNH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 3 | 175 | 173 | 4.5E-78 | ||
| PANTHER | 9 | 178 | 170 | 1.8E-107 | – | |
| PANTHER | 9 | 178 | 170 | 1.8E-107 | – | |
| SUPERFAMILY | 28 | 169 | 142 | 5.5E-33 | – | |
| CDD | 28 | 172 | 145 | 9.38986E-36 | – | |
| Pfam | 31 | 172 | 142 | 3.3E-22 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0393800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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