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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0396200 |
| Transcript ID | LotjaGi3g1v0396200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Embryo defective 1703 protein, putative; TAIR: AT3G61780.1 embryo defective 1703; Swiss-Prot: sp|O08764|ABTB2_RAT Ankyrin repeat and BTB/POZ domain-containing protein 2; TrEMBL-Plants: tr|A0A1J7HVP8|A0A1J7HVP8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0396200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:79645143..79650468) extracted from Lotus japonicus Gifu genome v1.2.
CAAGCTTTTCAAAATTAGCCAAAAAATTCACTTAATCAAGACTGCATTTTCCATGTATCCAAACAGATGGAAATAGTGTT TTCCACACATCTTCCACCCTCTTTCCACTTGTTTTCATGCTAAACAAACAAAGCAAAGTCCCTAGAGGTTATCGTCTTGG GGTTTATGGCAATTCCAATCTCAGCTAACGAGGTTTTGCGGCAATTTTCACACTCCATAGTTAACCAAAAGCTTCATTCA ACCATGCCACCACCACCCCTTGTTTCTCTGTAGCTTCTTCATCCATCCATGGACATTCTCAACTTTCCAATCCCCACTTT CTGCAACCCCAAAACTCTCAACCCATCAAGCCACACCATAGCTACCTACCCATTTCGGAGAAACCCGTTTTCACTCTATA TATCAAGTTCCAGCTCCAGAAACTTTCGAACTCTGGCCCAGTTTGGCCGACCCACCAACCGCCGCAACTCGCTCAGGAAG AAGCTTCTTCAGGATCAGCAGGTGAGTACTAATCATATTCCCACTGACCCATCTTCTGTTAATGGTGTGGAAGAGAGTGA TACAGGTTTTCAAGGGGTTTCTGTTGTTGACAATGTGGTTGAAGTAGAAAAACCAAAATCTAAAGTTTTGGGTGAGTCTG TTTTGTTGAGTAAATTGGAGAATTGGGTTGAGCAGTTTAAGGAAGATAATGGGTATTGGGGGATAGGGTCTGGTCCTATA TTTACTGTTTATCAGGATTCATCTGGTGCTGTCAAAAGTGTGTCAATTGATGAAGATGAGATATTACTGAGATGCAGGGT TGGGAGAGGTGTAATTGAGGATTCCCCTGAAGTGGGAAGTAAGATTATGGAAGCGAAGAACCTGGCTAGGGAGATGGAGA CTGGTAATAATGTGATTGCCAGGAATAGTTCTGTAGCTAAGTTTGTGGTTCAAGGTGAGGAGGAGGGTGGTTTTGTTAAG GCGATTCGTGGCTTTGTCGTTCAGCCTAGATTGCTTCCTAAGCTTTCAGGGAATGGCGGCAAAGTGTTGTGTGTCTTGGT TGTCCTGTGGGCGGTGAAGAAATTGTTTGCTTTTGGAGATAAGGAGGCGCGGCACACAGAAATGGAGAAGGAGATGATGA GGAGGAAGATCAAGGCAAGAAAGGAGAGAGGGGTGTTGGCAAAGGGCGTTGTTGAAGTTATTCCTGAACCTTCGGAGACA CCCGTGGTAAACATAAAAAAGCCAACGTTAGATAAGGAACAGCTCAAGAATAATATTCTGAAAGCTAAGGCTTCCACTGA TAAACTTTTAGTTCAGGATTCATCTGCTGAAGTGAGAACTGGATCTATGGATATGGACAATAAAGTTCAAGAAATTAGAG AAATGGCAAGGCAGGCACGAGAAATTGAGGGACGAGATCGTTCTTTAGTTAGCAGGGATATGGAAATGAATGACCCTGTG ATTGAGAAACCATCCCATGAGATTGAAGTCATAAGAAAGGATAACAAACAAGATAACAGTTTGAGTGATCATCAGAACAA AGTTGCAAGGGAAACAACAGATAATAATGCAATTCTAATGACAGGTGCTGTTGATGTCACTGAGAAAATTGATAATCCAA TTCTGCATGAGGTAGTTCCTTTTGATGAAAGCAATTTGTATGCTTCAGATGGTGATAGGGAAATCAATAAACATGTAGTA AAAACTACTGAAAATGCTGTGCACCTGAAGGACAGAGAAGATAGCAAGTCATCTAATACTCATATCAATGGCTCTTCTGT GACAGATGGAAGTTCTACGGACAAGAAACCAAGGATAATACGCTCTGTTAAGGAAGCTAGGGATTATCTTTCGAAGAGAC ATGACAAACTAGATCCTGATACAGGACCTAAAATTGAACCCGTGAAAGAAAATATTGCTGATTTGAAGTCTTCTAGTGTT ATTGATTTTAATGACCAGAGGTACCAGAATTTGGAGATGAACACAATTGTGTCCAAAAGTGAAACGTTTAAAGAAATATC AGATTTTAAGCCTGCTATAAATGGTAGTGAAGGTTCTAATCACAAGGATATGGAACTGAGCCCCACGAAGAATGACTGCT TGAAAGATTCTGGTATTGAACCAGGACTTGATGACCTTCAAAAGTCTGAGACCACTTTAGACGATAAAGTTGATGGCCCT GGTATGGAGAAAAATATCCCTGAAGTTGAGCCTGTAATTAAGCAAATTAGAAGTGATGCTTTTAATGGAATATCAGATTC TAAGCCTTCCATAAATCCTAGTGAAGATTCTAATCAGAAGGATGTTGAGTTTGGCTCAACAAAGGATGACTACTTCGAAG ACTCTGGTGTTGAACTTGGAGTGGGAGACCTTCAAAAGTCTGAGTCCAGTTTAGACCATGAAGTTAATGGTGTTAATACT GCAAACAGGCTATCTGGGAAAACAGAAAATTGGCTGGAGGAAAACTTCCATGAAGTTGAGCCCATTATTAAGCAAATTAG AGCTGGATTTAGAGATAACTACATGGAAGCAAGAGAGAGGGTTGATCAACCTTTAGATATACCCACCGAGATGGAATCAC TTGGAGTTGTTGAAGATGGAGGAGAACTTGACTGGATGCAGGATGATCATCTTAGAGATATTGTCTTTCGTGTCCGTGAG AATGAACTGTCTGGACGGGACCCATTTTACTCGATGAGTGCTGGAGATAAAGAAGCTTTCTTTAGAGGTCTTGAGAAAAA CGTGGAGAAAGAAAATAGGAAACTTTCACACCTCCATGAATGGCTCCATTCCAATATTGAGAATCTTGATTACGGAGCAG GTAGAGTTACCTGTTCCTAAAATTATATCATGTAGAGAATTTGATCAAATTTCAGTTTCTTGAAATAATTTTAGCAATTA ATTGTTTTCTGGAAGTATGCCAACATGAAAATATTGTTCACATTTTCCTGGATTTCTTATAAGCTTATTTTGTGGGATTC AATTCTTAATATATATTAGCTAGCATTTTCTTTTGAATAATTATAAGCATCGTGATAATAGATGTCCTTAATTTTTCTAG ATGGCATTAGCATATATGATCCGCCAGAGAAAATCATACCTCGTTGGAAAGGCCCCCCGGTGGAGCAAATTCCGCAGGTC CTAAATGAATTCCTGGATAAAAGAAAGGCAAATTCCACCAGAAATATGAAACCAGTGATGAAGGATGAGAATAGCTCTGC TAAAAAATCAGCTGATTCCTCTTTACAAGGAAAAAAGAATGATTCTATAGCACCTATTACGAAGTTGAAAAATCCAAAGA CTGTTATTGAAGGAAGTGATGGTTCTGTTAAAGTTGGCAAAAAATCAGGGAAGGAATATTGGCAGCACACAAAGAAATGG TCTCAGGGTTTTCTGGACTCTTACAATGCAGAGACAGATCCTGAAATTAAGTCTACAATGAAGGATATTGGGAAGGATTT GGATCGCTGGATAACTGAAAAAGAAATAGAGGAAGCAGCTGAACTAATGGACAAACTACCGGATAGGAATAAAAGTTTCG TGGAGAAGAAACTCAACAAGCTTAAAAGAGAGATGGAGTTATACGGACCTCAAGCAGTGGTTAGCAAATATCGTGAATAT GCAGACGATAAAGAAGAAGATTACTTATGGTGGTTAGATCTTCCATATGTACTGGTATGTATATATATTTTATTCTTATT TTCCACCAGTTCACTAGCAAACATGAAATTAATGATGAAATAGCAATGTTTTATCCTTGCATGATTGTTCCACTGGATCA AAGCTACTTTTCCTCCTTGTAAATTCCAGATTTTCCTCTCACTGGTTTTGTTTCTTCTTCTTTTTATTCTTCTACCTGTT TATGACTCTATGCCGATTCAATTTGTCCTTTCTCTCCTGTCAGTGCATTGAGATGTACACCATTGATGATGGAGAACAGA GGGTAGGATTTTATTCACTTGAGATGGCTGAAGATCTTGAATTGGAGCCTAAGCCATATCATGTGATTGCTTTCCAAGAC CCTGGTGACTGTAAAAGCCTTTGTTACATAATTCAGGCTCATATGGATATGCTTGGAAATGGCAATGCCTTTGTTGTTGC GCAGCCTCCTAAGGTATGAAGTTGTTTGAGCCAATGCTATTTGTTCCATTAATGATTTTAGAATTGAATCTGTTGAGTAG AGATTGGCTAGATAAAGCTTTACTTCTGTTTATGCTTTTGTAGACTGTTCAGTACTCCAGTGTCACAATGTGATCCTTTG AGAATTTCTTTAGTTTGGTCTGCTAAGACATATTTTCTGTATGATGAAAATTTCTTATTTCTCCTTGGGTAATTTTGAAT GTTCTTTGAACCTTCGTGGTAGGATGCTTTTCGAGATGCTAAAGCAAATGGGTTTGGTGTTACGGTCATCAAGAAGGGTG AACTTCAGCTCAATATTGACCAACCACTGGAAGAAGTGGAGGAACAAATTAAAGAGATTGGCAGCAAGGTGTATCATGAT ACGATCACGAAGGAGCGATCTGTGGATATAAACTCACTAATGAAGGGTGTATTCGGGCTAAATGACCGCACCACCAAGAG GTAATCATAGCTTGATTGTTCCATAATATAGCAGTGTTGAGGATACATTACTTAAAAGCTTAGATTGACAATTTTTCATC ATTTTATGATTGTTTGTACTTTGTACTGGTTTTAAGTGTTTTTCTTTGTTTGTCTCAATAAAAGGCTAAAGCGGAAGTTG AAGAAACCCAGAAAGGGATGATGACTCTCAAACTTTCAACAATGAAACCAGATGAAGACAGTGAAAGTCCTATGCTTCAG TCGTCGAACATGAAGCATGCATGCCCGCCTTTTTTCTTGGTCTAAAGGCATGCATGATTTTTCAAAACAGTTTTTCCTTG CTCCATTAACACTTACGGGGCAATATGGCATGAGAAGTTTGTACGGTTCAAGAAAATGGCCATGCCTGAATGTTGGCATG TGATATCATCAGTCAAAACTTCGAGTCTCGGTTTTTCCTACCCAAATTCCAGTTGTATGTATATGTATATATTTGAGGAA GATATAGTTGTAACCTTGTTACATTAGGCGCACGTAAGCTACTGCTGGTGATAGGTAGACAAAAGAAAGTAAGAAGTGAA GCTTCTATTGTTATTATTATTGGCACTAAAGATGCTTCTATTGATAATGAAATGTGAAAGAGAAACCACATTTTTTTATG ACAAAAAACAGCTTCGAGTCTTTGAACTTGTCATCTGACCGTTACCTATTTTCTATTTGGGTTTTCCAGAGACACCTTAA TCTTATTGTTTCTACTTTTCAGAGGTGATATACACTTAGGGAAGGA
CDS sequence (LotjaGi3g1v0396200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACATTCTCAACTTTCCAATCCCCACTTTCTGCAACCCCAAAACTCTCAACCCATCAAGCCACACCATAGCTACCTA CCCATTTCGGAGAAACCCGTTTTCACTCTATATATCAAGTTCCAGCTCCAGAAACTTTCGAACTCTGGCCCAGTTTGGCC GACCCACCAACCGCCGCAACTCGCTCAGGAAGAAGCTTCTTCAGGATCAGCAGGTGAGTACTAATCATATTCCCACTGAC CCATCTTCTGTTAATGGTGTGGAAGAGAGTGATACAGGTTTTCAAGGGGTTTCTGTTGTTGACAATGTGGTTGAAGTAGA AAAACCAAAATCTAAAGTTTTGGGTGAGTCTGTTTTGTTGAGTAAATTGGAGAATTGGGTTGAGCAGTTTAAGGAAGATA ATGGGTATTGGGGGATAGGGTCTGGTCCTATATTTACTGTTTATCAGGATTCATCTGGTGCTGTCAAAAGTGTGTCAATT GATGAAGATGAGATATTACTGAGATGCAGGGTTGGGAGAGGTGTAATTGAGGATTCCCCTGAAGTGGGAAGTAAGATTAT GGAAGCGAAGAACCTGGCTAGGGAGATGGAGACTGGTAATAATGTGATTGCCAGGAATAGTTCTGTAGCTAAGTTTGTGG TTCAAGGTGAGGAGGAGGGTGGTTTTGTTAAGGCGATTCGTGGCTTTGTCGTTCAGCCTAGATTGCTTCCTAAGCTTTCA GGGAATGGCGGCAAAGTGTTGTGTGTCTTGGTTGTCCTGTGGGCGGTGAAGAAATTGTTTGCTTTTGGAGATAAGGAGGC GCGGCACACAGAAATGGAGAAGGAGATGATGAGGAGGAAGATCAAGGCAAGAAAGGAGAGAGGGGTGTTGGCAAAGGGCG TTGTTGAAGTTATTCCTGAACCTTCGGAGACACCCGTGGTAAACATAAAAAAGCCAACGTTAGATAAGGAACAGCTCAAG AATAATATTCTGAAAGCTAAGGCTTCCACTGATAAACTTTTAGTTCAGGATTCATCTGCTGAAGTGAGAACTGGATCTAT GGATATGGACAATAAAGTTCAAGAAATTAGAGAAATGGCAAGGCAGGCACGAGAAATTGAGGGACGAGATCGTTCTTTAG TTAGCAGGGATATGGAAATGAATGACCCTGTGATTGAGAAACCATCCCATGAGATTGAAGTCATAAGAAAGGATAACAAA CAAGATAACAGTTTGAGTGATCATCAGAACAAAGTTGCAAGGGAAACAACAGATAATAATGCAATTCTAATGACAGGTGC TGTTGATGTCACTGAGAAAATTGATAATCCAATTCTGCATGAGGTAGTTCCTTTTGATGAAAGCAATTTGTATGCTTCAG ATGGTGATAGGGAAATCAATAAACATGTAGTAAAAACTACTGAAAATGCTGTGCACCTGAAGGACAGAGAAGATAGCAAG TCATCTAATACTCATATCAATGGCTCTTCTGTGACAGATGGAAGTTCTACGGACAAGAAACCAAGGATAATACGCTCTGT TAAGGAAGCTAGGGATTATCTTTCGAAGAGACATGACAAACTAGATCCTGATACAGGACCTAAAATTGAACCCGTGAAAG AAAATATTGCTGATTTGAAGTCTTCTAGTGTTATTGATTTTAATGACCAGAGGTACCAGAATTTGGAGATGAACACAATT GTGTCCAAAAGTGAAACGTTTAAAGAAATATCAGATTTTAAGCCTGCTATAAATGGTAGTGAAGGTTCTAATCACAAGGA TATGGAACTGAGCCCCACGAAGAATGACTGCTTGAAAGATTCTGGTATTGAACCAGGACTTGATGACCTTCAAAAGTCTG AGACCACTTTAGACGATAAAGTTGATGGCCCTGGTATGGAGAAAAATATCCCTGAAGTTGAGCCTGTAATTAAGCAAATT AGAAGTGATGCTTTTAATGGAATATCAGATTCTAAGCCTTCCATAAATCCTAGTGAAGATTCTAATCAGAAGGATGTTGA GTTTGGCTCAACAAAGGATGACTACTTCGAAGACTCTGGTGTTGAACTTGGAGTGGGAGACCTTCAAAAGTCTGAGTCCA GTTTAGACCATGAAGTTAATGGTGTTAATACTGCAAACAGGCTATCTGGGAAAACAGAAAATTGGCTGGAGGAAAACTTC CATGAAGTTGAGCCCATTATTAAGCAAATTAGAGCTGGATTTAGAGATAACTACATGGAAGCAAGAGAGAGGGTTGATCA ACCTTTAGATATACCCACCGAGATGGAATCACTTGGAGTTGTTGAAGATGGAGGAGAACTTGACTGGATGCAGGATGATC ATCTTAGAGATATTGTCTTTCGTGTCCGTGAGAATGAACTGTCTGGACGGGACCCATTTTACTCGATGAGTGCTGGAGAT AAAGAAGCTTTCTTTAGAGGTCTTGAGAAAAACGTGGAGAAAGAAAATAGGAAACTTTCACACCTCCATGAATGGCTCCA TTCCAATATTGAGAATCTTGATTACGGAGCAGATGGCATTAGCATATATGATCCGCCAGAGAAAATCATACCTCGTTGGA AAGGCCCCCCGGTGGAGCAAATTCCGCAGGTCCTAAATGAATTCCTGGATAAAAGAAAGGCAAATTCCACCAGAAATATG AAACCAGTGATGAAGGATGAGAATAGCTCTGCTAAAAAATCAGCTGATTCCTCTTTACAAGGAAAAAAGAATGATTCTAT AGCACCTATTACGAAGTTGAAAAATCCAAAGACTGTTATTGAAGGAAGTGATGGTTCTGTTAAAGTTGGCAAAAAATCAG GGAAGGAATATTGGCAGCACACAAAGAAATGGTCTCAGGGTTTTCTGGACTCTTACAATGCAGAGACAGATCCTGAAATT AAGTCTACAATGAAGGATATTGGGAAGGATTTGGATCGCTGGATAACTGAAAAAGAAATAGAGGAAGCAGCTGAACTAAT GGACAAACTACCGGATAGGAATAAAAGTTTCGTGGAGAAGAAACTCAACAAGCTTAAAAGAGAGATGGAGTTATACGGAC CTCAAGCAGTGGTTAGCAAATATCGTGAATATGCAGACGATAAAGAAGAAGATTACTTATGGTGGTTAGATCTTCCATAT GTACTGTGCATTGAGATGTACACCATTGATGATGGAGAACAGAGGGTAGGATTTTATTCACTTGAGATGGCTGAAGATCT TGAATTGGAGCCTAAGCCATATCATGTGATTGCTTTCCAAGACCCTGGTGACTGTAAAAGCCTTTGTTACATAATTCAGG CTCATATGGATATGCTTGGAAATGGCAATGCCTTTGTTGTTGCGCAGCCTCCTAAGGATGCTTTTCGAGATGCTAAAGCA AATGGGTTTGGTGTTACGGTCATCAAGAAGGGTGAACTTCAGCTCAATATTGACCAACCACTGGAAGAAGTGGAGGAACA AATTAAAGAGATTGGCAGCAAGGTGTATCATGATACGATCACGAAGGAGCGATCTGTGGATATAAACTCACTAATGAAGG GTGTATTCGGGCTAAATGACCGCACCACCAAGAGGCTAAAGCGGAAGTTGAAGAAACCCAGAAAGGGATGA
Protein sequence (LotjaGi3g1v0396200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDILNFPIPTFCNPKTLNPSSHTIATYPFRRNPFSLYISSSSSRNFRTLAQFGRPTNRRNSLRKKLLQDQQVSTNHIPTD PSSVNGVEESDTGFQGVSVVDNVVEVEKPKSKVLGESVLLSKLENWVEQFKEDNGYWGIGSGPIFTVYQDSSGAVKSVSI DEDEILLRCRVGRGVIEDSPEVGSKIMEAKNLAREMETGNNVIARNSSVAKFVVQGEEEGGFVKAIRGFVVQPRLLPKLS GNGGKVLCVLVVLWAVKKLFAFGDKEARHTEMEKEMMRRKIKARKERGVLAKGVVEVIPEPSETPVVNIKKPTLDKEQLK NNILKAKASTDKLLVQDSSAEVRTGSMDMDNKVQEIREMARQAREIEGRDRSLVSRDMEMNDPVIEKPSHEIEVIRKDNK QDNSLSDHQNKVARETTDNNAILMTGAVDVTEKIDNPILHEVVPFDESNLYASDGDREINKHVVKTTENAVHLKDREDSK SSNTHINGSSVTDGSSTDKKPRIIRSVKEARDYLSKRHDKLDPDTGPKIEPVKENIADLKSSSVIDFNDQRYQNLEMNTI VSKSETFKEISDFKPAINGSEGSNHKDMELSPTKNDCLKDSGIEPGLDDLQKSETTLDDKVDGPGMEKNIPEVEPVIKQI RSDAFNGISDSKPSINPSEDSNQKDVEFGSTKDDYFEDSGVELGVGDLQKSESSLDHEVNGVNTANRLSGKTENWLEENF HEVEPIIKQIRAGFRDNYMEARERVDQPLDIPTEMESLGVVEDGGELDWMQDDHLRDIVFRVRENELSGRDPFYSMSAGD KEAFFRGLEKNVEKENRKLSHLHEWLHSNIENLDYGADGISIYDPPEKIIPRWKGPPVEQIPQVLNEFLDKRKANSTRNM KPVMKDENSSAKKSADSSLQGKKNDSIAPITKLKNPKTVIEGSDGSVKVGKKSGKEYWQHTKKWSQGFLDSYNAETDPEI KSTMKDIGKDLDRWITEKEIEEAAELMDKLPDRNKSFVEKKLNKLKREMELYGPQAVVSKYREYADDKEEDYLWWLDLPY VLCIEMYTIDDGEQRVGFYSLEMAEDLELEPKPYHVIAFQDPGDCKSLCYIIQAHMDMLGNGNAFVVAQPPKDAFRDAKA NGFGVTVIKKGELQLNIDQPLEEVEEQIKEIGSKVYHDTITKERSVDINSLMKGVFGLNDRTTKRLKRKLKKPRKG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 11 | 1184 | 1174 | 0.0 | – | |
| PANTHER | 11 | 1184 | 1174 | 0.0 | – | |
| Coils | 349 | 369 | 21 | - | – | |
| MobiDBLite | 396 | 418 | 23 | - | – | |
| MobiDBLite | 396 | 414 | 19 | - | – | |
| MobiDBLite | 473 | 503 | 31 | - | – | |
| MobiDBLite | 483 | 497 | 15 | - | – | |
| MobiDBLite | 646 | 672 | 27 | - | – | |
| MobiDBLite | 646 | 664 | 19 | - | – | |
| MobiDBLite | 873 | 926 | 54 | - | – | |
| MobiDBLite | 873 | 892 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0396200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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