Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0408400 |
| Transcript ID | LotjaGi3g1v0408400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | LURP-one-like protein; TAIR: AT3G14260.1 LURP-one-like protein (DUF567); Swiss-Prot: sp|Q9LUM1|LOR11_ARATH Protein LURP-one-related 11; TrEMBL-Plants: tr|I3SC02|I3SC02_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0408400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:81173832..81175818) extracted from Lotus japonicus Gifu genome v1.2.
TCTCAAACCACTAATTGCCATACATAAAGATAACTAATGTAGGCTTTCTTCTCTTAAAAGAATAATCGACGTATTACGTA TATATGATTAAATATTTTCATGTGGCTATGATTATCCCACACTAGTCCTATATAAAAAAACCTTTTGTTTGTTATATCAC ATATACAATTTCAACAATGGGAAAAGTTCATCCCCAAGCATTGCATTCTTCTACTACTTGCCATCTCACTTCCAAGCAAG AGACGTTCACTCTATGGATGAAATCTCTGGTTCTGAATGGAAAGGGATGCACAGTCTTTGATTCAAATGGCCAAATTGCC TATCGAGTTGATAACTACAATTGCAGTCATAGAAATGAAGTTCATCTCATGGATCAAAAAGGCAATGTTTTGTTCACAAT ACTAAAAAAGGTACACAAATTGACAGCTATATATATGACAAACTGTTGGAAGTCTTCAACAATTGATCTTAAAACCATAA TCAGTTATGAAAATATATTTTTTTCATAGCTTTTGTGTTTTAGAATTCATTATAAGGAAAGAGAAACAAATTGATCATCT AGTATAGTACGTTTGGATCAACTTTTCTTTCATCGGAATTAATTCGGAAATTCAGAACTTACTCATATAAGTTTCTTTTC GAAATTGATTATGACTTTAAAATCAATTAAAGAGGAGTTAGCAAAAAAATATCATTCGAGAAACACGTTGAAGCCAAAAT CATGATGGACAAAAGCAAAAGCTAAGAGAAGTTGCTTGTACTCTTTGATTTTGATTTCACCATTGTTTTCGAACGAATTT CTAAACATACACTTAATAATTAATATATTTGTCCCTTTTAAATAAAACAGCTCAAATTTAACATGTGCCTTTTTTTGTCT GTTTGTATAGCTATGTAAGTTCTCCAGGTTTTGGGAGGGTTACAGATTCCCAGCCACAAAGAATGAGCACAAAGGACCAA GCTTTCGTGTTTACCAAACTCATAGAATCTCCAAAGGGGATTCAACTTGTCAAGTTGAACTTGGATTGGACAAAAATCAA TCATATACTTACAAAATAGAAAGCATCACTTGCAAGTCAGCTTGCAAAATAACTGATGAGTTTGGAGTGATGGTTGCAGA GGTAAAATTTCTAATATCTTCTTGTTAGCAAAGTTTGGTACAGAAGATAATTTATAATCTGTTTTTGTTTAACATGTATT TTGCTTTTTTTCTATGAGCAGCTAAGGAGAAAGAAGTCAAATTGTGGAGTTGATTTAGGAGATGATGTTTTCACAATGGT TGTGGAGCCAAACAAAGATCTTTCTCTAATCATGGGTCTTGTGGTAACTTACAGCCTCATCAACTATAGAATGTGACTAT TTTGGAAGCAACAGAGTACACAATGGCAACATCAATCTTGAGGAAGTTTTTCAGCTTTGTCAAACCGAGTTTCAAGTTTA AGCTTAATTTGGAAATGGCTGTGAATGTCCAAGCTCAAAATGACTTTGTTTGACACCAAATGATCAAATAGACCACTTGT TATTGTTACTATTTTTGGGTGAAAAATGCTTTCACTTATGCTGTAACTCAGAAGGCAATAGTGCTATGTTTTTTCCCTGG ACTGCAAACCAAGTTGCTGAGAGAATATGGAAATTGGTTTTAGCAGCAGGTTGCAATTTGCAAGTGTTCCTTTAGATCAT TAGATGGTTTGGGAAAAGTGTTTAGTACCCAGAAATCACTTTTGTTTTGTACTTGACTGATGCTGTTTTCTTTTCCCCTT TTATTTTGTCATCTGATTGAATTCTGTGATATATCCTTTTTGTAATGAAATGCAGTGTTTGCATACCTACAGTAATTTAT CATGAAGTCTCTTTGTATATAATATATATATGTTTTTCCATGAAGATAGAAATCTTACGGCTTCATTTACTTATCAGTTG GGAAAATGTTAAAAAGCCATAATTGTGCCAAAATTATTTGACATGTTTGTTAGAATTTTTCCTAACA
CDS sequence (LotjaGi3g1v0408400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAAAAGTTCATCCCCAAGCATTGCATTCTTCTACTACTTGCCATCTCACTTCCAAGCAAGAGACGTTCACTCTATG GATGAAATCTCTGGTTCTGAATGGAAAGGGATGCACAGTCTTTGATTCAAATGGCCAAATTGCCTATCGAGTTGATAACT ACAATTGCAGTCATAGAAATGAAGTTCATCTCATGGATCAAAAAGGCAATGTTTTGTTCACAATACTAAAAAAGCTATGT AAGTTCTCCAGGTTTTGGGAGGGTTACAGATTCCCAGCCACAAAGAATGAGCACAAAGGACCAAGCTTTCGTGTTTACCA AACTCATAGAATCTCCAAAGGGGATTCAACTTGTCAAGTTGAACTTGGATTGGACAAAAATCAATCATATACTTACAAAA TAGAAAGCATCACTTGCAAGTCAGCTTGCAAAATAACTGATGAGTTTGGAGTGATGGTTGCAGAGCTAAGGAGAAAGAAG TCAAATTGTGGAGTTGATTTAGGAGATGATGTTTTCACAATGGTTGTGGAGCCAAACAAAGATCTTTCTCTAATCATGGG TCTTGTGGTAACTTACAGCCTCATCAACTATAGAATGTGA
Protein sequence (LotjaGi3g1v0408400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGKVHPQALHSSTTCHLTSKQETFTLWMKSLVLNGKGCTVFDSNGQIAYRVDNYNCSHRNEVHLMDQKGNVLFTILKKLC KFSRFWEGYRFPATKNEHKGPSFRVYQTHRISKGDSTCQVELGLDKNQSYTYKIESITCKSACKITDEFGVMVAELRRKK SNCGVDLGDDVFTMVVEPNKDLSLIMGLVVTYSLINYRM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 195 | 194 | 5.8E-82 | – | |
| PANTHER | 2 | 195 | 194 | 5.8E-82 | ||
| Gene3D | 13 | 198 | 186 | 5.9E-39 | ||
| SUPERFAMILY | 16 | 196 | 181 | 5.23E-44 | ||
| Pfam | 17 | 190 | 174 | 2.4E-43 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0408400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…