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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0425800 |
| Transcript ID | LotjaGi3g1v0425800.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cytochrome P450, putative; TAIR: AT3G13730.1 cytochrome P450, family 90, subfamily D, polypeptide 1; Swiss-Prot: sp|Q94IA6|C90D1_ARATH 3-epi-6-deoxocathasterone 23-monooxygenase; TrEMBL-Plants: tr|V7APG7|V7APG7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0425800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:83546100..83548703) extracted from Lotus japonicus Gifu genome v1.2.
ATGGTGAAATTAGTGCAGAGAACTATCCAAGCTAGAAGAAAGAGTGGCATCTCCAAAGCTCCAAAAGATGTAGTGGATGT GCTTCTTAATGATGCAAATGAGAAATTGACAGATGATTTAATAGCAGATAATATTATTGATATGATGATTCCAGGGGAGG ACTCAGTGCCTGTTCTCATAACTCTAGCTATAAAGTACTTATCTGAATGTCCTGCTGCTTTGCAAAGATTGACGGTATGT TAGTATTAGCATGTTTGGATCAGCTTATATTTCATCAAAATACATTCTAAAACTTAGAAGCTATTCACAGAAGCTTCTCC CAAGAACTTCAGAATCAATGATTATATGTATCTTCTCAAGCAAATAAAATTAAATTCACTTCACCACAAATCAGTAGCCT TAAAGCTGTCTCATATTGTATTGGTTAACTAGTGGTTATACACAGGTCCTAATGGCCTAGTAGCTAGAATTACATTTTTT TATTTTATTGTATAAAATCATATTTTGTAACTTACCACTATACTTCTTTTCCTCTATTTTACCAAGTTTGGTATTTTTCC TGAGACAAAATTGGCTAAGCAGGTTATGTCCTTTCTATGCTAGCTTTATGACTAGGAACCCTCAAAAAGGGAAGATTATA CTCAAGGAAAGGTAAATAATTGAATGCTTTAGTGGTAGAAAAGTATGCTAGTCCTTCCATTTACCAAAGCTTTTGAATAA TCTCAGTGGTTGTGGGGTGTAACATATGAGATTGCAACAAGTGGGATTGAGAAAGTCTTGGAACTAATTTCCTGATTAGC TTTAGGCAAATGACTTTTTTTAATGATTATCAGGAGGAAAATATGAAGCTTAAGAAACTTAAAGATCAGCTTGGGGAGCC CTTATGTTGGAGTGATTACATATCATTGCCATTTACTCAAACAGTAAGACAAACATGGCTCCTCATCAAAGACAAATAGA AGTAGTGCATAATTTTTAAGTAACTTATTTTATTTTCAACTCATACAGGTTATCACAGAAACTTTGAGAATGGGAAATAT AATAATTGGTGTTATGAGAAAGGCCATAAAAGATGTTGAAATAAAAGGGTATTTTATACCACAAGGATGGTGTGTCTTTG CAAATTTGAGATCGGTTCATCTAGATGAGAAAAACTATGAGCTTCCATATCAATTCAATCCATGGAGGTGGCAAGTAAGA GAAATTCTGTACTCTCAGTTGTGATTTAATATCTTAAGGTTTTATATTATATTCTAACAGATGCATTGGGGAAATTTTCA GAATAAAGACATTAGCAGTTGCTATTTCACTCCTTTTGGAGGGGGACAAAGGCTGTGTCCTGGCCTTGACTTGGCCAGGC TTGAATCTTCCATCTTCCTACACCACTTTGTAACTCAATTCAGGTAATCATTCTATCCTTGGTTCTAATTACTGAAAACA GTGAGTGCCTGTTTGGATACACAGTGGAAACCATGGTGAAGTAAAAATCACGGTGGATAGCCACAAAAGCTAAGGGAAGT TGCTTCTGTTGACGTGATTTTGGTTCACCGTGGTTTTCCACCGTGTATCCAAACATGACTTCTAAATTTTATTGTGTCCA AATTTAGGGCATCCCCTTTGTTATTAATTTAATATGCCCTTACCTTAAGACATAGGAGCAAAGGCAAAATCATAGCAGCA GACATGAAAATTTATAACCAGTCTAACTGAGGAAAGCTATGATGTTTCTTGAATGTCTTTTAAGTGTTAATACACATGAC ATGAGTCATGACATGTCAAGCTAGATGACTTTAATCAATATCATCCTGCAATTTCAAACTTGCTTTAGTGGAATATTAAA AAAGAGAGAGTTGAGTGATGATTAGTGAAGTTCCCCAAATCTAAGTGTTTGTCTTCTAGTTAGTGATGAAGGTGGCTCAA TCTCCAAGAAGCCACTAGTAAAAGGGGAGGAAAGGGAGAGATACAAGACTGGACCAACATAGACACAAAGAATGTTAATT CATTAGAAAAGTACATTTGACTAAAGTTTCTTGGCATTGTTTACTTATTTCCATGTTTGAAGAGAAAAATTTCAATGCAC TATCATTATATTATTCATTAGGATTATTGATTTTGAATTCCTAGTGCACATGCCTCTATGATGATATAGTCTTAAAAATA GAAGATCCAAGAATAAGGAGTGATGTTGGTCAAATCAAGTTCGGTGGACAAAGCCTTAGATTATATCAGTAAGTCAAGCA CCATAAGAATTGAGGTTCTGCTAGGTCTGCATAATATGCAATTCAATAGTGCACTTTTATGCTTTTCTTTTCCAACACCT TTGAACTATTCAAAATCAATTCTAGGGAGAAGTTTTTGTGAGTAGCTTTTAAATGTCAGAATTGATTATAAGAAAACAGC AAGTGATTCAAACATGCTATACTCTGCTTAGCTTGTTTCAAACTTGGAAAAAAACATTGTTAATGCTATGCAATGACACT AAGGCATCTTAAAATTTTGTGTTTCACATGCAGATGGTGTGCTGAAAAAGATACAATAGTGAACTTTCCCACAGTAAGAA TGAAAAGGAGGATGCCTATCATGGTAAGGAGAGTGGAAACTTGA
CDS sequence (LotjaGi3g1v0425800.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGAAATTAGTGCAGAGAACTATCCAAGCTAGAAGAAAGAGTGGCATCTCCAAAGCTCCAAAAGATGTAGTGGATGT GCTTCTTAATGATGCAAATGAGAAATTGACAGATGATTTAATAGCAGATAATATTATTGATATGATGATTCCAGGGGAGG ACTCAGTGCCTGTTCTCATAACTCTAGCTATAAAGTACTTATCTGAATGTCCTGCTGCTTTGCAAAGATTGACGGTTATC ACAGAAACTTTGAGAATGGGAAATATAATAATTGGTGTTATGAGAAAGGCCATAAAAGATGTTGAAATAAAAGGGTATTT TATACCACAAGGATGGTGTGTCTTTGCAAATTTGAGATCGGTTCATCTAGATGAGAAAAACTATGAGCTTCCATATCAAT TCAATCCATGGAGGTGGCAAAATAAAGACATTAGCAGTTGCTATTTCACTCCTTTTGGAGGGGGACAAAGGCTGTGTCCT GGCCTTGACTTGGCCAGGCTTGAATCTTCCATCTTCCTACACCACTTTGTAACTCAATTCAGATGGTGTGCTGAAAAAGA TACAATAGTGAACTTTCCCACAGTAAGAATGAAAAGGAGGATGCCTATCATGGTAAGGAGAGTGGAAACTTGA
Protein sequence (LotjaGi3g1v0425800.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVKLVQRTIQARRKSGISKAPKDVVDVLLNDANEKLTDDLIADNIIDMMIPGEDSVPVLITLAIKYLSECPAALQRLTVI TETLRMGNIIIGVMRKAIKDVEIKGYFIPQGWCVFANLRSVHLDEKNYELPYQFNPWRWQNKDISSCYFTPFGGGQRLCP GLDLARLESSIFLHHFVTQFRWCAEKDTIVNFPTVRMKRRMPIMVRRVET
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 78 | 78 | 4.7E-111 | – | |
| PANTHER | 1 | 78 | 78 | 4.7E-111 | – | |
| Gene3D | 1 | 78 | 78 | 5.7E-9 | ||
| SUPERFAMILY | 2 | 207 | 206 | 9.95E-50 | ||
| PRINTS | 40 | 57 | 18 | 3.5E-11 | ||
| PRINTS | 51 | 68 | 18 | 7.1E-6 | ||
| PANTHER | 78 | 208 | 131 | 4.7E-111 | – | |
| PRINTS | 78 | 89 | 12 | 7.1E-6 | ||
| PANTHER | 78 | 208 | 131 | 4.7E-111 | – | |
| Pfam | 79 | 187 | 109 | 1.1E-31 | ||
| Gene3D | 79 | 208 | 130 | 1.5E-34 | ||
| PRINTS | 117 | 141 | 25 | 3.5E-11 | ||
| PRINTS | 149 | 159 | 11 | 3.5E-11 | ||
| PRINTS | 150 | 159 | 10 | 7.1E-6 | ||
| ProSitePatterns | 152 | 161 | 10 | - | ||
| PRINTS | 159 | 170 | 12 | 7.1E-6 | ||
| PRINTS | 159 | 182 | 24 | 3.5E-11 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Iron ion binding | Interacting selectively and non-covalently with iron (Fe) ions. | ||
| Molecular function | Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor. | ||
| Molecular function | Heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi3g1v0425800.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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