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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0440600 |
| Transcript ID | LotjaGi3g1v0440600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glutamate formiminotransferase 1; TAIR: AT2G20830.1 folic acid binding / transferase; Swiss-Prot: sp|Q99XR4|GLFT_STRP1 Glutamate formimidoyltransferase; TrEMBL-Plants: tr|I3SST7|I3SST7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0440600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:85352155..85354142) extracted from Lotus japonicus Gifu genome v1.2.
ATGTTAAAGTCCATTCTAGGTTGCTGCAAGGTATACATATCAGAGAGCAGAAACAGGAGTGCATTGGAATCAATTGAAAA AGCTGCCAAGCTTTTCCCCTTAGCTCCCATTGTTAACAAGTTTGAAGATGTGGCCTACAATAGAGTTGGTTACACCCTTG TCTCTCAGTTGGATTTGGATCCAGTGCAGTCTACTGGGCCATGCCACTTGAAAAATGCAGTGCTTGCTATGGTGAAAGCT GCCTTTGACAGCATTGACTTTCAACAACACACTGGAACTCATCCTAGACTTGGAGTTGTGGACCATATATGTTTTCACCC ACTTGCTGAAGCTTCCTTGAATCAAGCTGCTAGCACTGCTAGGTGTTTAGCTATGGACATGGGTTCTAATCTGCAAGGTT AGTAGGATTGCTTTGAAGGGTCACATTGTATGATATTTAATTACATGTGGGCTGAGAATGTTATTTCTTGGAAAGGGTTT GTGTTGGATATCTCAGTAAACAAAGTGAATTTAGTTCTAGCCATTCAGGAAGAAGCTCTTGAATATGAAAATTGATCAGT CTCTGCCCATTATGTAATATTAAATAAATCCACTCCACTTGCTCTTTAGTCTTTACTAATTACCAGAAGCCACTTCTTTC ACCATTGCCATTACTGTATAGCTACTTTTAACTTATATTATAGAATTATGCTGCATCAAAAGCTAAAGGGTAGTCTGTGG AGCCTTAGCAGGAAGTTAGAAGTTGAATACTATTTACTTAATTCAGAGTTCATATGTTATTTACTATATTTTAGAGGCCA AAGTCATGATGTGGGTCAGATTTTGGGTGGCTTGTGTACTCTAGGAGAAATAAGAAAATAGCCAGTCAGAATTAGGAGTA GGACAGTTATGCAGCGGTTATTTAATTATAGTATGTTTTAGGATAGTTATGTAGTAGTTATTTAATTTTATAATAGGGAA GTTGTGATATGAGTAGTTCTATAGTTATTTAGCAGTTATTAGCAGTATGTGGTGTAGTTATAGGAGGAAATGGGCAAAGT TTCTGTTGTATTCTGTTTTATTGTGTGTAAGGTTGAGAATAATTGTCTCAGAGTAGAGACTTGGTGCCAAAGATGGTAGA TCAATTTCTCTACCAGAATTGTGTACTTGTGAATTCTGAGCATTTCAGTAAATTTCTCTTTCAAACCCTACTATATACAT GTGAAATAAGTATATCCTTGTCAATTTTATGAAGAAATTTCTGGAACCTCATTCTGTTTGATTGTTGGTCAATAATTATG TCTTCTGTCAAATTCTTCTTAGCTCCCATGTTTCAAATTGTTGGATTTTTACTTGTTCTTACCTGACTGATTTCAGGATC ACTACTTTATACACTTACAAAGAGATTATGAAACTATCTTTAGTTTGTCAAATGTCAATCATCTTTCTAAATTAATTTAT TTCCATGGCATTGATCATTAAAATCACATGCAGTTCCTACTTTTCTATATGGAGCAGCCCATGAAGAAGGGAGGACACTT GATTCAATCAGAAGGATATTTGGTTATTTTAAGCCAAATTCTTCCGAAAACCAGTGGATTGGGGGGCTAAAATCAGATTC TTTGCCACTGAAGCCTGATAGTGGTCCATTTCAAATAACTCCATCAAAAGGTGTTGTGGTCATTGGAGCTACCAATTGGG TTGACAACTACAATGTCGCTCTACTTTCTTCTGATATCAGTGCTGCTAGTCGGATCGCGAAACGGGTTAGTGGAAGAGGT GGTGGACTTCCTACTGTGCAGGCCATGGCACTTGCACATGGTGAAGGTGTCACTGAGGTAGCCTGTAATTTGTTGGATCC AAAGAAAGTTGGCGGTGAAAGAGTACAACAAGAAGTTGAGCGCCTCGCAAAGGAAGAAGGTATTTCTGTAGGGAGAGGAT ACTATACCGATATTTCGCAGGAAGAAATAGTTAAGAGTTACTTGAAGCTGATTGAAGTGAGAAGTTGA
CDS sequence (LotjaGi3g1v0440600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTAAAGTCCATTCTAGGTTGCTGCAAGGTATACATATCAGAGAGCAGAAACAGGAGTGCATTGGAATCAATTGAAAA AGCTGCCAAGCTTTTCCCCTTAGCTCCCATTGTTAACAAGTTTGAAGATGTGGCCTACAATAGAGTTGGTTACACCCTTG TCTCTCAGTTGGATTTGGATCCAGTGCAGTCTACTGGGCCATGCCACTTGAAAAATGCAGTGCTTGCTATGGTGAAAGCT GCCTTTGACAGCATTGACTTTCAACAACACACTGGAACTCATCCTAGACTTGGAGTTGTGGACCATATATGTTTTCACCC ACTTGCTGAAGCTTCCTTGAATCAAGCTGCTAGCACTGCTAGGTGTTTAGCTATGGACATGGGTTCTAATCTGCAAGTTC CTACTTTTCTATATGGAGCAGCCCATGAAGAAGGGAGGACACTTGATTCAATCAGAAGGATATTTGGTTATTTTAAGCCA AATTCTTCCGAAAACCAGTGGATTGGGGGGCTAAAATCAGATTCTTTGCCACTGAAGCCTGATAGTGGTCCATTTCAAAT AACTCCATCAAAAGGTGTTGTGGTCATTGGAGCTACCAATTGGGTTGACAACTACAATGTCGCTCTACTTTCTTCTGATA TCAGTGCTGCTAGTCGGATCGCGAAACGGGTTAGTGGAAGAGGTGGTGGACTTCCTACTGTGCAGGCCATGGCACTTGCA CATGGTGAAGGTGTCACTGAGGTAGCCTGTAATTTGTTGGATCCAAAGAAAGTTGGCGGTGAAAGAGTACAACAAGAAGT TGAGCGCCTCGCAAAGGAAGAAGGTATTTCTGTAGGGAGAGGATACTATACCGATATTTCGCAGGAAGAAATAGTTAAGA GTTACTTGAAGCTGATTGAAGTGAGAAGTTGA
Protein sequence (LotjaGi3g1v0440600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLKSILGCCKVYISESRNRSALESIEKAAKLFPLAPIVNKFEDVAYNRVGYTLVSQLDLDPVQSTGPCHLKNAVLAMVKA AFDSIDFQQHTGTHPRLGVVDHICFHPLAEASLNQAASTARCLAMDMGSNLQVPTFLYGAAHEEGRTLDSIRRIFGYFKP NSSENQWIGGLKSDSLPLKPDSGPFQITPSKGVVVIGATNWVDNYNVALLSSDISAASRIAKRVSGRGGGLPTVQAMALA HGEGVTEVACNLLDPKKVGGERVQQEVERLAKEEGISVGRGYYTDISQEEIVKSYLKLIEVRS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 300 | 300 | 1.1E-134 | – | |
| PANTHER | 1 | 300 | 300 | 1.1E-134 | – | |
| Gene3D | 4 | 201 | 198 | 6.7E-65 | ||
| SMART | 5 | 200 | 196 | 5.3E-80 | ||
| SUPERFAMILY | 6 | 199 | 194 | 7.85E-48 | ||
| Pfam | 8 | 199 | 192 | 8.3E-54 | ||
| Gene3D | 204 | 282 | 79 | 1.9E-8 | ||
| SMART | 205 | 302 | 98 | 1.1E-5 | ||
| SUPERFAMILY | 205 | 278 | 74 | 1.52E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Folic acid binding | Interacting selectively and non-covalently with folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines. | ||
| Molecular function | Transferase activity | Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2. |
Expression pattern of LotjaGi3g1v0440600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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