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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0441200 |
| Transcript ID | LotjaGi3g1v0441200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ultrapetala; TAIR: AT4G28190.1 Developmental regulator, ULTRAPETALA; Swiss-Prot: sp|Q8GZA8|ULT1_ARATH Protein ULTRAPETALA 1; TrEMBL-Plants: tr|A0A151TP49|A0A151TP49_CAJCA Protein ULTRAPETALA 1; Found in the gene: LotjaGi3g1v0441200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:85400792..85405066) extracted from Lotus japonicus Gifu genome v1.2.
ATTAAATCAGAAATTAGAAAATCAGAGCACTCCTCCCCAAGAATACTAGAATAATGCAAGTTCCATTTAAATTAAAGAAA AATAGAACAACAGCAATCGAAAACCTCGGCACCTCTCTCTGAGAGGGACCTCCTATAAACAAAAAGCCCTCACCCCAAAG CAACCCATCACTCTCTACTGTCATATCATGCAAATAGACCCTTACCCACTCAACATCACACTATTTCACTATTCGCGTGT TTGGATTTCTATTGAACTCATTCTACATCTTCGATTCACATTAAATTATTAGAATCAAATCATAAATATTTGGAGATATT TGAAATTACATTTGCGTTTATACCAAACGGGAACCAAACATGGCCTTATTTAGCCAGCTAAATTCAACCAACCTCATCAA CACACATCAAATCCCACTCTCTCCTTTTATTACTACTTCAACGCTCTCTCACTATGCCATTGCCAGATCTCTCGTACTCC ATTGGGAGAAGAGAAGCGTGCACTTTTGTTTTTCTCTTCTCTTCTGTTCTTCCCCTTTGATTCTTCTCCTCTAGGTGTTT TTCTACCTTTCTGTACTTGTTTTCCTTTCGTGATCTTTCGCCGCATACACAACCCTTTTTCTGATTTTCCTTCAACACAT GCCCACCAAACCCTGTTGCCAAAAACAGAGTCTTTTTGGAGAGAAAATGGCGAATGCGGTGGAAAATGAAAATGGGTTGA CGACTATGACGATGATGTTCAGTGATGATGAGTTGAAGGAGGTGAGTGGGGTGAAGCAAGTTGGTGGAGATTATGTGGAG GTAACGTGTGGATGTACCAGCCATAGGTATGGTGATGCTGTTGGAAGGCTTAGGGTTTTTGTTAATGGATACCTTGAAAT CTCTTGTGAATGCACCCCTGGTTGCCAAGAAGGTTTCTCTCTCTCTCTCTCTCTCTCAATCTCTTATCTCCTGAAAATGG GGTCTCTATTTATGTACATGTTGATCAGGTTGAGTCCTTTGACTTTGATCAGTTCATTGTAGGGTTGTTTTTATCTGCTC TGAGTTGATACCTTGAGTGCTTCTGTAGTGGTTGTTATTGTGCAAGAAAAAATGTTTTTTCGCATTAAAAATCTGTGCAT GTTTGTATACAACTGAAATCGTGGTGGAAAGTTGCTGAAGCTAAGGAATGCTGTTCTCCACAGTGATTTTGGCTTTATTG TGACTTTTCACAGTGTGTCCAAACATGTAATTTGTCCTACTAAGATGTTAGGGAATTTCTCACTTTTTGTTGTTATATAT TATATATTCTTTTCTTTTTACCCTTGATGACAATTTCTTCCCAGCAAATAGTATTTCTGTTGTGCAAGTCATCTCTTCTC TTTTCTCTCTAAGTTCATAGTTAAAGTATGTTTTGATTTTTCCTAGTGAAAGTTGTTTTGATGTTTGAAGTGTTTTTTAT GTCTCATTGGAGGCCATAAATATATACTCCCCCACTCATGAACAGTTTTTTTGGGGGGTGAATCCATTGCCCTTTTACCG TCAGGCAGGGCTTAAACTTTCTATCTTTTACTTAAATGTACTGCACAATGGATATTCATAGTTTTCATCATAAACTTTTT TGGGTCTACATTATCTGAGTTGTTTTTACCTCAGCAATGTAGTCAAGATTTTATATTCAGGCAATGAAAGCTTAGTATCT TGGCTAATGCGTGATTATATAAACAGGAAGCAGTTACATTGTTTTGGGAATCTTGGTTTCCACTCTGTTGCTTGATATAT CATTGTTCCTCATGAGAACTTGAATAATTGATTCAACAGTTTTACATGAAATACTGACATAGAAAATGAATTTTTGTGGT GTTATTTTAGCATGTCATTGTGATTGAATGTGATTATTACCTGACTGATCAGCCTTCAGGGAAGAGACTGCATGATGGTT TGTGCATACTTATTCTGAATTTTATTATCAGTGAAAGAAATATTTATTGATCCCTATGGTGGAATTGAGGCTAGGAGTAC AAGTTATTTGTCTTATATCTCTAATTGTTTAACGTGGCAGACAAAGGTGGTGGCTAAATGATCCCCTTTTTCTCTTCATC TGTCTATTGTACTAGTATTATTCTCTGTACTTTTGCTTTGCTTTTATGCAAGCATGACGAAAATTTTGTTTTTAAGTTAT TTTTTAACATTTGTTTAGTTCTGAATCAAAATGCTGCACCCTTGTAACAGTGTTCTTTTCTTAGTTCCAGAATTTCTTTC TTAATTACCTTATTTGCATAATGGTGTTTTACTGTTAGGCAAGTTGACCCCTGCTGCTTTTGAGAAACACTCTGGAAGAG AGACAGCCAGGAAATGGAAGAACAATGTCTGGGTAATAGTCAATGGTGAGAAGGTTCCATTGTATAAAACAGTGCTGCTC AAATACTACAATCAAGCATTAAGAACAGCACATGGGTCTGGACGTGCTTGCCACCGTGATGAGTTCATTCGCTGTACTAG ATGTAACAAAGAGCGCCGGTTTCGCCTCAGAACTAAAGAGGAATGCCGCCTTCACCATGATGCTTTGGCTGATCCAAATT GGAAATGTTCTGATCTTCCGTATGACAAGTATGTTCACTCTCTTGTATTGCAATTCACATTGAGCTAACACCTAACAGTT TAATCTGTAAGACATGCTTATGCTTTCAATGCTGGGATAATGGGATTAGCCATGTCCATGTTTAGGACTAGTGCTTATCT ATTCATGTTGCATTCAACTGATTTCCAAACACACACCAAATTATCTATATTTTTTATCCCTAATACTTACGTTGACTTTG TAATGCATTTCATGAAGAAAAAAATTAGTAGTAACTAGTAACTGTTAACTGAGTTTCAGAATTACATGTGATGTTGAAGA AGAGAGAGCAAGTCGCAGAGTTTACAGGGGATGCACTGGTTCTCCTGCATGCAAAGGATGCACTTCTTGTGTGTGCTTTG GCTGTGACATTTGCAGATTTTCAGACTGCACTTGCCAGACTTGCACTGACTATACAAGGAATAATGCCAATGCTTGAGCT CAGATCTTGTTTCCTCTTTTCTGATTTTTGGTACCCTTTATCTTCGTCTGGACTGAATTACTTACCAGTCCTAGTTTAGC ATTCAATGTTCTCACTGGCTGGATTATTACTTATTAGTTCCAAATTAATGATATGTGTTTCTTTTCTGCTTTGTTAACGT AACTTTTTTAGAATTTAATATTGCATTCTCTAACTAATTAAGATGATTCATCAATAGATATAGTAGTTTAATGACTTTTA TCTATGCATAAATTCTTTGAAGGTAGTAAAGGATCAAATCTTTTATTTGTATATCTTATGAGGAAAAATTTGTTACAAAA GAAAATGCTAATCCTTCCTTAGTTAGCATGTTGGACCACCTTCTATTTTTTGGGAATTAATGATGACACTTGAAAGTTAT TCACATAAGCTTCTCTCTACACTTTGAAATTAATTGTAGAATAATTTTCAAACATGCATGAACATGGTAAATAAAGGAAA CTGAAATTTTCAGGGTTCTAATAAAAGAGTTTATTTAAATTACTTTATAGTTAAATGTTTGTGTAAATATTTGAAAGAGT TTATGTGAATACCGTATAGCTTATACTTGAAAAGTTGTTCATAGTAGCTTATAATTTTCATATTGGTGTAAATACAAACT TCATTTCACGTACCATAATCATGTGTTTGATGGTTGTCAAGGATTTCTAGACACTCAATCAGATTGATTGGCGTGTTTAT CATATAAATTTCCAACATTAGTTACTTTTAAAACACGCTGGTTAGTTGCTAGGTTTTATAAGTTAAGAGATTTATTAAAG TAAGCCAAAAGTGAGTTCATAAGTTAAGAGCCTAACGTGGGCTAGGTATATAATTTATTTTGGTTGAACTCAACATGTAT TTTTTTTTTTGTTACATCGGAAAATGACAAAGAAAAAACAACAAAACTACGGCACCGCTAGAGAATCTTTGAGAAGAATG AGTAGGAGCTCACTCTCCGGATGATGAACATCTTGGATCCCCGGGGAAGCAAGGTTATATCCCTGTTTAGAGAGCCAGCA GCTGCGTTGCCATCTCTATGCAACCAGCTAACCATCACGTGCCAGGTTCTTGCCATGAGCTGGATAATTTCACGAATGAT AGGAGCATGGGGATGATGGCTCACTCGGTCCAAGTTACCACTTTCCAACTCAACATGTATCTATGTTGTACTTGACGTGA TGAAAATTTTCTTCCCAACTAAGCTAAATTTAACG
CDS sequence (LotjaGi3g1v0441200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCCACCAAACCCTGTTGCCAAAAACAGAGTCTTTTTGGAGAGAAAATGGCGAATGCGGTGGAAAATGAAAATGGGTT GACGACTATGACGATGATGTTCAGTGATGATGAGTTGAAGGAGGTGAGTGGGGTGAAGCAAGTTGGTGGAGATTATGTGG AGGTAACGTGTGGATGTACCAGCCATAGGTATGGTGATGCTGTTGGAAGGCTTAGGGTTTTTGTTAATGGATACCTTGAA ATCTCTTGTGAATGCACCCCTGGTTGCCAAGAAGGCAAGTTGACCCCTGCTGCTTTTGAGAAACACTCTGGAAGAGAGAC AGCCAGGAAATGGAAGAACAATGTCTGGGTAATAGTCAATGGTGAGAAGGTTCCATTGTATAAAACAGTGCTGCTCAAAT ACTACAATCAAGCATTAAGAACAGCACATGGGTCTGGACGTGCTTGCCACCGTGATGAGTTCATTCGCTGTACTAGATGT AACAAAGAGCGCCGGTTTCGCCTCAGAACTAAAGAGGAATGCCGCCTTCACCATGATGCTTTGGCTGATCCAAATTGGAA ATGTTCTGATCTTCCGTATGACAAAATTACATGTGATGTTGAAGAAGAGAGAGCAAGTCGCAGAGTTTACAGGGGATGCA CTGGTTCTCCTGCATGCAAAGGATGCACTTCTTGTGTGTGCTTTGGCTGTGACATTTGCAGATTTTCAGACTGCACTTGC CAGACTTGCACTGACTATACAAGGAATAATGCCAATGCTTGA
Protein sequence (LotjaGi3g1v0441200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPTKPCCQKQSLFGEKMANAVENENGLTTMTMMFSDDELKEVSGVKQVGGDYVEVTCGCTSHRYGDAVGRLRVFVNGYLE ISCECTPGCQEGKLTPAAFEKHSGRETARKWKNNVWVIVNGEKVPLYKTVLLKYYNQALRTAHGSGRACHRDEFIRCTRC NKERRFRLRTKEECRLHHDALADPNWKCSDLPYDKITCDVEEERASRRVYRGCTGSPACKGCTSCVCFGCDICRFSDCTC QTCTDYTRNNANA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 28 | 251 | 224 | 3.2E-118 | – | |
| PANTHER | 28 | 251 | 224 | 3.2E-118 | ||
| ProSiteProfiles | 37 | 149 | 113 | 8.679 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
Expression pattern of LotjaGi3g1v0441200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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