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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0442400 |
| Transcript ID | LotjaGi3g1v0442400.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plant/F9H3-4 protein; TAIR: AT1G03610.1 plant/protein (DUF789); TrEMBL-Plants: tr|I1M3V0|I1M3V0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0442400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:85518209..85521153) extracted from Lotus japonicus Gifu genome v1.2.
ATGATCTTTAATAAAGGGTCAATGCATTCTAACCTTGATTGCTTTGTTCGCTGCACCACCCCTGTGGTTCAATCCCAGTT TCTTCCCAAGGTGAGTTTTATTTTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGTTTTCTTTGCCATA ATCATAGAACATTTGATCCTAATTTTTGGTGTTTTATGTTGTTGTTTTTTTGTTGCAGTCAGAGATTACAAGCTTGAACC GTTTGTGGCATCCATGGGAGAGAGAAACAGTGGAATATTTCACCTTGGGTGATCTTTGGAATTGCTATGATGAATGGAGT GCTTATGGTGCAGGTGTTCCTATTACCTTGACCACCAGTGGAGAGACTCTTGTGCAGTACTATGTGCCTTATCTCTCTGC AATTCAAATTTTCACTAGCAATAGTTTCAGGTATGAGTATGAGAATGATCAATATCCATCACTGTGATATGGTGGTGGGT GTTGGTTGGATCATTATAGTTTTGTTGACCAAGTTGAGTTCTTATCTTGTTTCACCTCAAAGTTCAGCTTGAAAGCCTTT GCTTTTATTGCTGTCTCCAACATGTCTTGTAACCAGAAAATAAGTTTGAGTTTTTAATGATCTTTGTTGACCAAATGCAC CATTTAGTGACTATGTTAATTTCTTATAGTCAAACTTTCACGCGGATAACATGATCATGCTTTTGAATAATTTTACTTGA AGTGAAACTCGTTTACAAATCACGGTGAAACCAAAACTCAATTGGACAGAAGCAGTTTGTCTTAGCTTTGGCTTCTGCCC ACCGTGGTTTTGGCTTCATTGCGAGTTAAACATGCACTTTGTTGTGGAGCTTCGTCAACTTCATGACTTTGTAGCTTAAT TGAATAGCTCAATTTGAATGAATGTTTCAGGGAAGAAGCTGAGTCAGGTGATTGTGAGACAAGGGATTCCTATAGTGATT CTTACAGCGATGAGAGTGAGTGTGAAAAGTTATGGAGGTGGGATGGAACTTCTTCAGAAGAGGGGGGGTTTGAGCAAGAT TGCCTCTGGCATTTCAATGACAGATTGGGTCACCTCTATTGCCAGTACTTTGAAAGATCAAATCCTTATGGAAGAGTTCC TCTAATGGATAAGGTGTGTTAGCTTGTTCTTTTTGGGCCATATCTTACTTCACTTTTTTTTTGTATTGTTAATTACCTTG ATTAGAACTTTATAAGTTCATCTATTAGCATATTTGCATCAGCTTCTTTTTTGTCATAATCAATTCTGATCCCAAGAAAC TGTTCACGGAAGCTTCTCCTGATAATTAATTTTGACTTTATAATCAATTATATAAGAATGACCAAAGATGCATTGTGTTC TGCTTTTCATGATCTTAATGAGATCAGAACCAACTATAGGCATAAAACTTGGTAAGGTTAAGGTACTTAGAAGCAAGCTA TAATCTCCAAAAATCTAGTAATATGATAGGCATCAATCAGTAAAAGATAGATTCCAACTTTTGATTTTTAAATACGAATC TTGATTGTGGGGAGTAGAGAGCATAGACCCATTTTCATCTGAATATGTCCATGCTGCAATTGAAATTATGCATATGCTTT TTTCTTTATTTCTTTTCAATGTAATTGTCATGCTTATGTCTACTGTCTAGCATATGTTCTTCCATGACTTCTTTTTTCTG ATACCACTCAAACATAATGTATGTAGTTTTCATAGTGAATGCAACAAAAAGGACTTAAAATTCTTGTAGCATAACTGATA ATCTATAAAGATTCCATTGTTGACTTGGTGGGATGGTTTCTCACTTTCAGATTACTGGCTTAGCTCAAAGGTATCCAGGG TTGATGTCATTAAGAAGCGTAGATCTTTCGCCAGCAAGTTGGATGGCAGTCGCTTGGTAATTAATTTTCTGTCTCATCAC CTATAGCTACTTATCCAACATGATTTATTCACACCATCCTTACTGAATTAACTTTGCCTAGCTAATGGTTAAATACATTT GGATCGTGCTTTCTAGCACTTAGTATGTTATTTACTGACAAGTAAACGTTTTTCAGGTACCCCATTTATCACATCCCCAT GGGAAGAACAATCAAAGATCTTTCTACATGCTTCCTCACCTACCACACACTTTCATCTTCATTTCAAGGTATTTTCTATT CATGCTTTTATTGTTATTTACCAAGGGGTTATGATTATGTACTCTCTGACTTTTATTCAGTGTTTTCAGAACCACATGTA TTATGGTATAATGGTTATTTCTGCATGAAATAATAGCCCCAAAAAATATCAAATTTCTTGACCGGTTCAAATTGATTTAA CACCGGATTTGGTTGGTTCTATCGGTTTTTGACCTATTTTACTGATTTTTCACAAGTTTTTATTAAGTCCTGTTGTAGGA GAGGACCGAATCGGCCAAAGTTCCGGTTCATGGTTGGACCAATCGAAGCGGTCCGATTTTGACAACATTGCTTTTATCTC TCTCAAAGTTCACTTTGAGATAGCTGGAATTTTGTGAAAAAAAATGAACATGCACTAATTGCATGTGTGGTATAGCTTTT TTTTCTAAAGTCAATTCTGAAACCCTAAAGCTACTTATTTAGATTTTTCCTCTAAATTGAGTCTGGCAGTAAAATCAATT GTAGAGTTATTTTCAAAAACATTTGCTAAATTGTGGGATATTTTTCATGTACTTGTGTAGGCATGGACCTTGATGATGAT GTTGAAGGTGGGCAGGAGAAGAAAAAGGAAGGGGAAGGCATCTCCCTGCCAGCATTTGGATTGGCAACATACAAGATGCA AGGGGGAAATTTGTGGGTGGCAGGAAATTATGGTCGGGACCAAGAAAGGCTCTTGTCATTGTTTAGCGTGGCCGACTCAT GGTTGAAGCAACTAAGGGTTCAGCATCATGACTTTAATTATTTCATGGGCATTCGGCATGGCTAG
CDS sequence (LotjaGi3g1v0442400.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATCTTTAATAAAGGGTCAATGCATTCTAACCTTGATTGCTTTGTTCGCTGCACCACCCCTGTGGTTCAATCCCAGTT TCTTCCCAAGTCAGAGATTACAAGCTTGAACCGTTTGTGGCATCCATGGGAGAGAGAAACAGTGGAATATTTCACCTTGG GTGATCTTTGGAATTGCTATGATGAATGGAGTGCTTATGGTGCAGGTGTTCCTATTACCTTGACCACCAGTGGAGAGACT CTTGTGCAGTACTATGTGCCTTATCTCTCTGCAATTCAAATTTTCACTAGCAATAGTTTCAGGGAAGAAGCTGAGTCAGG TGATTGTGAGACAAGGGATTCCTATAGTGATTCTTACAGCGATGAGAGTGAGTGTGAAAAGTTATGGAGGTGGGATGGAA CTTCTTCAGAAGAGGGGGGGTTTGAGCAAGATTGCCTCTGTTCTCACTTTCAGATTACTGGCTTAGCTCAAAGGTATCCA GGGTTGATGTCATTAAGAAGCGTAGATCTTTCGCCAGCAAGTTGGATGGCAGTCGCTTGGTACCCCATTTATCACATCCC CATGGGAAGAACAATCAAAGATCTTTCTACATGCTTCCTCACCTACCACACACTTTCATCTTCATTTCAAGGCATGGACC TTGATGATGATGTTGAAGGTGGGCAGGAGAAGAAAAAGGAAGGGGAAGGCATCTCCCTGCCAGCATTTGGATTGGCAACA TACAAGATGCAAGGGGGAAATTTGTGGGTGGCAGGAAATTATGGTCGGGACCAAGAAAGGCTCTTGTCATTGTTTAGCGT GGCCGACTCATGGTTGAAGCAACTAAGGGTTCAGCATCATGACTTTAATTATTTCATGGGCATTCGGCATGGCTAG
Protein sequence (LotjaGi3g1v0442400.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIFNKGSMHSNLDCFVRCTTPVVQSQFLPKSEITSLNRLWHPWERETVEYFTLGDLWNCYDEWSAYGAGVPITLTTSGET LVQYYVPYLSAIQIFTSNSFREEAESGDCETRDSYSDSYSDESECEKLWRWDGTSSEEGGFEQDCLCSHFQITGLAQRYP GLMSLRSVDLSPASWMAVAWYPIYHIPMGRTIKDLSTCFLTYHTLSSSFQGMDLDDDVEGGQEKKKEGEGISLPAFGLAT YKMQGGNLWVAGNYGRDQERLLSLFSVADSWLKQLRVQHHDFNYFMGIRHG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 9 | 148 | 140 | 3.2E-144 | – | |
| PANTHER | 9 | 148 | 140 | 3.2E-144 | – | |
| Pfam | 10 | 285 | 276 | 3.0E-84 | ||
| PANTHER | 151 | 291 | 141 | 3.2E-144 | – | |
| PANTHER | 151 | 291 | 141 | 3.2E-144 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0442400.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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