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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0448800 |
| Transcript ID | LotjaGi3g1v0448800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Basic-leucine zipper (BZIP) transcription factor family protein, putative; TAIR: AT3G58120.1 Basic-leucine zipper (bZIP) transcription factor family protein; Swiss-Prot: sp|Q9M2K4|BZP61_ARATH Basic leucine zipper 61; TrEMBL-Plants: tr|G7ZUL8|G7ZUL8_MEDTR BZIP family transcription factor; Found in the gene: LotjaGi3g1v0448800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:86200395..86204355) extracted from Lotus japonicus Gifu genome v1.2.
CCAGTGGCGACTTTCCAGTAATACCATTGAGTCCCAACCCCTCTTCCCAGCTGTTGATAGCTGTCCAATCTCTCCCATGT GACCCCACTGCACAACACACATACCCCAAATATTTCTTTTTGGGATTTCAATCTTCTAAATAAAAAAATAATCACAATTA AAAATTGACCCATTTTTTATTTTCCAAAAAAATTCATGACTTTGTTGTTTTTTCTTCCCCCTAACATTCCCTGTGAATGC TGCAGACATTCATATATTTATAAAAAGGCTTTGCTAGAGCCTCATCTGTTCCATTTCTGATGCAATGTGCATAGATATAT CTTATATATATAGCAACAACAACAACATAATTTGAGGCTTGCAAAAATCAAAGGTCCAGTTTGTTTTGATTCTCTCTTAA TTCATTACGTCTCATTGTTGTTGTTGTTGTGTCTATCTCAAATGGCACAATTACCTCCAAAGGTTCCAACCATGTCACCA AGTTGGCCAGACTTCTCCTCCTCTCACCACCAAAAGATGCCATCAATGAATGGTGGCATCAACAATAATCACAACCCTTC CTGGGTGGATGAGTTTCTAGACTTCTCCTCGGCGCGGCGGGGCGCTCACCGGCGGTCGGTGAGCGACCCCGTCGCGTTCC TGGAGATGCCAATGCTGGACAAGCACGGCGGCAGGAACAATGTCCACGATGATGGGGAGTTCGACAAGTTTGATGATGAA CAATTCATGTCCATGTTCAATGATGAGATCTCTGGGGTCCACAATATGCCGCCGCCGCCGCCAACAAAAACAGCAACGTT GTCCACCTCCAACCCTTCAAGCCCTGAGGAGCAGAATTTCGTCAATGATGAGAAAGAGACCAAGAAGGAGGTGGAGGAGC AAAAGAAGAAGGAAGAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGAGGCGTGCCATCACCTGCAGCAACAATTGAAAAAT GAACCGGATGAGGTTGAAAGCCAATGCGAACAGGAAAATCCACAGGGTTCAAATAACACCAGTGCTACTAATTCTTCCAA TGATAGAATTACTGACCCCAAGAGAGTCAAAAGGTAGTCATCACAACCATTCATGTCATTTAATTTCTGAAATGTTTGGA AACTTGTTAAAAAATCACAAGAAAACCAAAATCGTGGCAAAAATTAAGAAAAGTTACTTGTCTACCAAGATTTGGCTTGG ATTCTTGTCTTCAGGTACACCTCTTTCGGTACACCTCTTTTCTCATGGTAATTTCATGCAATGCCCCCATGATACAAAAT TGGATAATGATGTCAACTTCCTAAAATGTAAAAATAATTCTCATCTTTTTTGTGAGCTTGATTTTGCTATCATGTGCATA AGAAATTTTCTGTAATTAATTTTAATGTTAAAATTAATTCTGGAAAGAATTTCCTCTAATTAAGTAGATTTTTATAGTAG CATAATTGATTTTTGGAAAAATAAGTTGATCAAACAAACTAGTTATATATTTTAATGGTTAATTAGGTTATGAATCATTC TTATGATTGAGAATACTTGCTCTTCATAAATCATAAACTGATATTCATTTTCCTCTTGAATATTTCTGCAAACTGTTTGA TAGTTTTCTCTATTATCTTTCTGCAAATGGAAATTTATGAACCGTTGATAAGGTTTTTTTTTTGTGTCTCTAAATTCTGG TTTAATTTGCATCAGAATCTTAGCAAACAGACAATCTGCACAAAGATCGCGAGTGAGGAAGCTGCAGTACATATCAGAGC TTGAGCGAAGTGTAACTTCATTGCAGGTTTGTGTCGACGTAATGTGATGTGACAATATCTAATAAATATTCTTCTGCTTT TTTTTTTAATAAAATGTTAATATAGATCATTGACTCTTCATTTGGTATTTGGTTGACCAACGAAGGCTGAAGTTTCAGTG CTGTCTCCCCGGGTTGCATATTTGGATCACCAACGCTTGCTTCTAAATGTTGACAACAGTGCTCTCAAGCAAAGAATCGC TGCCCTTGCTCAAGACAAGATCTTCAAAGATGGTAATCTCTTTAATCAATTATAGTTACATCTGTTTGTGTTAGCAATTT TTTCTTGGATTAATTAATCGATGTATTCATTTTGTTAATGCATGAAGAAGCAATTGATCACTAATACTCAAATTGGTAAT AAAATCTGTACATAGTTGAAAACTCCTTCATGTTCTAAAATTACGGTAATTAAACGATCACACAAATAAAGAAAAGTTAT CTTTATGTGAGTAATTTTTTACTATATATGCAAACATGTACTAAGAGAAAAACACTAAATTTAATGTGAATGTGCTTTAT TCAAACAATAATGTATACTTGTATAGCTCCTTGAAGTTGGTTAAGTATTCACTGGATAATATTAACAAAGCTAAAGGTTA GACAAACTGGATCAAAGAGATACTAATAAAATTGCACTATGGTTGGCCTTTCCTGGTGAAATTTGCACACTATGTATAGT ATTTAAATTCTTTACTTCAGAAGGGAGAAACATGCCAATTATGAAACTGCAGACATAATGTATTGAATTTAGTGAAAGTT GTTGAATGCACTAGAATTTAAGTCTGTGTCTGATCATGTGCTCAGTCTCCAACAAGTAGTTTATTAACCAAGTTATTGAA TTCAATGAAATTCATGCAGCACATCAAGACGCACTGAAGAGGGAGATAGAGAGACTGAGGCAAGTGTATCACCAGCAGAG CCTCAAGAAGATGGAAAATGCTGCAGCAGGGTCACCTTTACCTTCCCCATCAACAAAGCCAACAATGTGTGATAATACTA CTCACACAGAAAAGGAACAGCAGCTTCTTCACGCATGAAAGAATACCAAATGCAAGTAAGAAATCCTACATTGAAGAAGA AAAAAGAAGTGTTGAGCGGCCATCTAGTAGCTAGCTAGTTCACATGACACTGTGATTCTTTATATTTTTACAAAAGAAAT TGCAGGATTTTGGATAAGAGATGGGGGGAAGAAAAATGGAAAGAATTCAACAAAAAAGAAATTGACCAAATTTGTTTGTG TGCTTGTAATGTATTGAATGATGTGATGTAGTTTGTATGTAAGTGCATGTTTGAAAATTCTTCTTCATTTGATTCTGAAA AATAATTAATTTTGTGGAAAAGTTTATGTAAGTAGCTTCTGAGCATCCGTAGACCGGACATGGTGAGAATTTTGATTAAT CAATTGATGAAGGAAATGTTCACTGAGAAGAATCACGTTCTGGGGGTGGTGGTGGTAGTAGGTTTCTGCTATGAAACTGT GGAGGCACGTGATGTGTTTTACTTTAAAAGAAAGGGACCACTCAAAGTGTGCATGATTGGGATGCAGGGTAATACATGTG CAGCATGCAGTAGTGGCTTGCATCAAAATAGAGGTTGGAAGAAACAGATTGTGTCTGCTTTAACTTGATAATATAGGAGT GGAGATGTATATTGCTGCTAGCTAGCTGCTGATTCTTAATTTATTTCATCACTTGCTTCTTTATTTATTTCTTGTCTTTG ATTCTTTTTATATTTAATTTGTTTGGTGCTTTTCAATATTAATTCATGTTGGAAGACAAGGACAAGTGGGCTTGATGGAT GCATAAAGGAAAGTTTGTCAGTGGGTTTAATTGGTTGTATTTTGTATTATGTAATCATCTTTATTTGACATATTAATTAA AAAATCAAAATGTAAATAGTCAGTTGACTCAATTTGCCCTGTATATAGTGAAGTTTTAAGTGTTTCTGTTTTTTGAGCTG TGAACCGATCATATTTTCCTATAGACCAGACGGGGCAAACAAAAGATTATGGTTTAGATTTGCATTTCAGGGAGTCAAAA GAATAGAGAGAATCTTGGCAAATTGAGTTTATAATGGAGCAGTGGCGGATGCAAGGGGTGACATGGTCATGCCATGGTCA CCCCCATAATCTTATTCTTTATACATACTAGGGGAAAAAAT
CDS sequence (LotjaGi3g1v0448800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCACAATTACCTCCAAAGGTTCCAACCATGTCACCAAGTTGGCCAGACTTCTCCTCCTCTCACCACCAAAAGATGCC ATCAATGAATGGTGGCATCAACAATAATCACAACCCTTCCTGGGTGGATGAGTTTCTAGACTTCTCCTCGGCGCGGCGGG GCGCTCACCGGCGGTCGGTGAGCGACCCCGTCGCGTTCCTGGAGATGCCAATGCTGGACAAGCACGGCGGCAGGAACAAT GTCCACGATGATGGGGAGTTCGACAAGTTTGATGATGAACAATTCATGTCCATGTTCAATGATGAGATCTCTGGGGTCCA CAATATGCCGCCGCCGCCGCCAACAAAAACAGCAACGTTGTCCACCTCCAACCCTTCAAGCCCTGAGGAGCAGAATTTCG TCAATGATGAGAAAGAGACCAAGAAGGAGGTGGAGGAGCAAAAGAAGAAGGAAGAGGAGGAGGAGGAGGAAGAAGAAGAA GAAGAGGCGTGCCATCACCTGCAGCAACAATTGAAAAATGAACCGGATGAGGTTGAAAGCCAATGCGAACAGGAAAATCC ACAGGGTTCAAATAACACCAGTGCTACTAATTCTTCCAATGATAGAATTACTGACCCCAAGAGAGTCAAAAGAATCTTAG CAAACAGACAATCTGCACAAAGATCGCGAGTGAGGAAGCTGCAGTACATATCAGAGCTTGAGCGAAGTGTAACTTCATTG CAGGCTGAAGTTTCAGTGCTGTCTCCCCGGGTTGCATATTTGGATCACCAACGCTTGCTTCTAAATGTTGACAACAGTGC TCTCAAGCAAAGAATCGCTGCCCTTGCTCAAGACAAGATCTTCAAAGATGCACATCAAGACGCACTGAAGAGGGAGATAG AGAGACTGAGGCAAGTGTATCACCAGCAGAGCCTCAAGAAGATGGAAAATGCTGCAGCAGGGTCACCTTTACCTTCCCCA TCAACAAAGCCAACAATGTGTGATAATACTACTCACACAGAAAAGGAACAGCAGCTTCTTCACGCATGA
Protein sequence (LotjaGi3g1v0448800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAQLPPKVPTMSPSWPDFSSSHHQKMPSMNGGINNNHNPSWVDEFLDFSSARRGAHRRSVSDPVAFLEMPMLDKHGGRNN VHDDGEFDKFDDEQFMSMFNDEISGVHNMPPPPPTKTATLSTSNPSSPEEQNFVNDEKETKKEVEEQKKKEEEEEEEEEE EEACHHLQQQLKNEPDEVESQCEQENPQGSNNTSATNSSNDRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSL QAEVSVLSPRVAYLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQDALKREIERLRQVYHQQSLKKMENAAAGSPLPSP STKPTMCDNTTHTEKEQQLLHA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 338 | 338 | 4.7E-141 | – | |
| PANTHER | 1 | 338 | 338 | 4.7E-141 | – | |
| MobiDBLite | 1 | 35 | 35 | - | – | |
| MobiDBLite | 13 | 35 | 23 | - | – | |
| MobiDBLite | 103 | 208 | 106 | - | – | |
| MobiDBLite | 132 | 149 | 18 | - | – | |
| Coils | 134 | 170 | 37 | - | – | |
| MobiDBLite | 163 | 179 | 17 | - | – | |
| MobiDBLite | 182 | 202 | 21 | - | – | |
| SMART | 203 | 267 | 65 | 2.8E-14 | ||
| Pfam | 204 | 254 | 51 | 2.7E-9 | ||
| ProSiteProfiles | 205 | 257 | 53 | 9.726 | ||
| Gene3D | 207 | 279 | 73 | 3.2E-11 | – | |
| SUPERFAMILY | 207 | 261 | 55 | 2.25E-11 | – | |
| CDD | 208 | 258 | 51 | 5.01848E-24 | – | |
| ProSitePatterns | 210 | 225 | 16 | - | ||
| Coils | 286 | 306 | 21 | - | – | |
| MobiDBLite | 306 | 342 | 37 | - | – | |
| MobiDBLite | 306 | 333 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi3g1v0448800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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