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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0457900 |
| Transcript ID | LotjaGi3g1v0457900.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plant/F9H3-4 protein; TAIR: AT1G03610.1 plant/protein (DUF789); Swiss-Prot: sp|Q92I77|Y543_RICCN Putative dioxygenase RC0543; TrEMBL-Plants: tr|A0A1J7HA41|A0A1J7HA41_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0457900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:87206938..87210082) extracted from Lotus japonicus Gifu genome v1.2.
ATGATTTTGGATAAAGGGTCAATGCAATCTAAGTCTAACCTTGACTGCTTCCTAAGGTGCACCACACCTGTGGTGCCATC TCAGTTTCTTCCAAAGGTTTTTTTTTTTGTTTTTTTCAAAAAATTCAATGTGTTTTCATATTTCCAATGTGATAATAAGA TTATTTTATACTAAATTGGGTTTAATTTTTTTTCTGGGGACAGCATGATATTAGAAAGCTTAACCCTTTATGGCATCCAT GGAATAGAGAAGCAGTTGAGTATTTCACTCTGGGTGATCTATGGAATTGCTTCCATGAATGCAGTGTCTATGGAGCTGGA GTTCCAATCACCTTGGCCAAAGGGGAGACACTTGTGCAGTACTATGTGCCTTACCTCTCTGCAATTCAAATATTCACCAG CAACACCTTCAGGTATAATTCACACATATATGCATATGAAGATATCATCATTATCTTTCCTAGATTTAATCAAATCAAGG CTTTTTGTTTCAACTTGAAAGTTTTAGTTTCCATTGATGTCCCTAGTGTGTGTGAACCATTTTTTTTATTTAATATTCAT ATTTTTCCTACTATAATAGATAAATGTTTGTAAAACTTTCTACAATTGATTCTAAACCAGAATCATTTATTGGGAGAAGT TTCATAGTTAATTTGGATTTGGTGCAGTAAAAAATGGTGTAGTCACTACTGTCATCAAATTATAGCATTTGAAGAATTAG ACGGTTAAGATTAGTTCATCTTTTAACTCCAATTTACCGCAACTAATTTTAGACCGTCAAATCTTCAATCAGTTCTTCTG GCATTTTGAGGAAAGAGAAGCCCGTCCAAATATGCTAGTAAATCTGGTTTTAAAATTCTTATGTGGTCAAACTTTTATGA TGCATGTGAGGTGGTTTTGTTTTCATTTATTTAGGAGCGATTTTGTTAATTATGATGTGCATGTTTCTAGGCTTTGATGG TTAATTAGTAGCCTGCAACCTTTAATTGAACATCTATCACGGGAAAATGATGCATCATTGCATGATGAATTTGAATGTGT TTTTTCAGGGAAGAGACTGAGTTAGGTGAATGTGAGACAAGGGATTCTTACAGTGACTCTTACAGTGATGAGAGTGAGTG TGATAAGCTATGGAGATGGGATGGAACTTCATCAGAAGAAGGAGGGTTTGAGCAGGATTGTTTATGGCACCAAAATGACA GATTGGGTCACCTCTATTTCCAGTATTTTGAAAGATCAACTCCTTATGGAAGAGTTCCTCTAATGGATAAGGTGTGTAGT TTCTTACTTTTGCATATTTTCTAATGCAATCCCGGATCCATGCATTACAAAACAGTAAAATCACATATTCGCATATCACA TTACTTTTCTCTCTCTTGTATTCCTATATTTAGGTGTCTACACAAAAAAATGGTACATGAATCTTCATATTTTTTTCCTT TATTCAAGCATGGAAAGTCCTTCATCTATATCCAATTAGCTATATTCTGATTCTACCTTCCTATTAAGATGAGAGCCCCA TAGATTAAGGCATAGGATTAGGGAATGTTTGTTTGTTTTTTAATTTAATGGATATTTCCCAAACTCTTTATTTGATAGTT ATCCATAAAAGGAAAACTGTGGCTTTTGACCTTTCAATGTGAATACAGAAAACTCTTTTTTTTTGTCTCCATCTTATCTT CAGGAAATAGAAACACTACGTCTACATGATATTCTATTCCCTTTCCTTTTCTATTTTTTTCAAATATATTATCAGTTATT ATACTTCTTGAGCATATGTTCTTCCAAAACTTTGGTTTATTGATTTGATTCCTTAAATTAATCTTTCATTAACTTAGCGT GTCATTATGATTTCTTTAACAAAAAAATGTTTGTTAATAATTAGTCAATTAAAGATACAAAATAGTTCAAATTCATCTTC TATGTTACCGTTTTAGTCCTTTGAGACTTGTGAGGACAAACATGGTATTGCATTAGATGTTTGAGAAATGAATTCAATGT AAAAAATATTAAAACATAGATGTGATAATATGTTAACTAATTTAGGAGTTTGCTAAAAAGAAGTTTTAGGCTTTTAGCAT AACTGACCAATTGGTTCCTTGCTTTCAGATTACTGGGTTAGCCGAAAGATTCCCAGGGTTGATGTCACTTAAAAGCGTTG ATCTTTCACCAGCAAGTTGGATGGCAGTTTCTTGGTAATTAATTTTCTTATCACAGGCACATTTGGAAATTCTGCTATAA TTTATTTTAAATCTAAAATTAATTTTTGAAAGAAGCTTCAGAATGCCGTGATTCATTTTGAGGAAAAATAAAAATGATCC AAACATGCTATATAGCTACATCATGAACATGCTCTGTTTTCTTTTTGTCCTTTTTCCACTAAAAATTCTAGTCCTGGTGG TTAAGTTAATACATCACTTGATGTTAGGCCTTGTACTATTGAGTTTAAGCGTAATTGATGAATAATCCACTCATGGTTGA TGTTTTCAGGTATCCTATATATCATATCCCTATGGGAAGAACAATTAAAGATCTTTCAACATCCTTCCTCACTTACCACA CACTTTCATCTTCATTCCAAGGTATTTCTTATCCATGTTGCCCTCCTATAGTAATCATGAGGATCTGCTATGACTATGTT TGGATAACTGTTGAAACTAGTGCTAACGAACATTAGTACTCACTTTGAGTCAAAAAGTTAAGAGAACTGGATTGGAAAAA AAGTCAGTTTATGTTACACTACACTCAACTCAACTGATATCCAAGCATGTTGTGCCTTTTAACTTTTTGTACTTTTGGTG TTGGAGGGCAATGATCTTGAAAAATTTTACTCCAAGAAAACTGTAAATTCTAGAAAAGAACATGCACTAAAATGGAAACT TTGCTGATATGTTTGTGCAGATATGGACCTTGATGATGACATTGAGGGAGCCCACGAGAAGAGAAAGGAAGGTGAAGGCA TCTCCCTGCCCCCATTTGGTCTGGCCACGTACAAGATGCAAGGGAATGTGTGGATCTCAGGCCATTGTGGTAGGGACCAA GAGAGGGTAGTTTCACTCTTGAGCGTGGCAGATTCATGGTTAAAGCAACTAAAGGTTCAACAGCATCATGACTTCAACTA CTTCAGGGGCATTCGGCATGGCTAA
CDS sequence (LotjaGi3g1v0457900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTTTGGATAAAGGGTCAATGCAATCTAAGTCTAACCTTGACTGCTTCCTAAGGTGCACCACACCTGTGGTGCCATC TCAGTTTCTTCCAAAGCATGATATTAGAAAGCTTAACCCTTTATGGCATCCATGGAATAGAGAAGCAGTTGAGTATTTCA CTCTGGGTGATCTATGGAATTGCTTCCATGAATGCAGTGTCTATGGAGCTGGAGTTCCAATCACCTTGGCCAAAGGGGAG ACACTTGTGCAGTACTATGTGCCTTACCTCTCTGCAATTCAAATATTCACCAGCAACACCTTCAGGGAAGAGACTGAGTT AGGTGAATGTGAGACAAGGGATTCTTACAGTGACTCTTACAGTGATGAGAGTGAGTGTGATAAGCTATGGAGATGGGATG GAACTTCATCAGAAGAAGGAGGGTTTGAGCAGGATTGTTTATGGTGTCTACACAAAAAAATGATTACTGGGTTAGCCGAA AGATTCCCAGGGTTGATGTCACTTAAAAGCGTTGATCTTTCACCAGCAAGTTGGATGGCAGTTTCTTGGTATCCTATATA TCATATCCCTATGGGAAGAACAATTAAAGATCTTTCAACATCCTTCCTCACTTACCACACACTTTCATCTTCATTCCAAG ATATGGACCTTGATGATGACATTGAGGGAGCCCACGAGAAGAGAAAGGAAGGTGAAGGCATCTCCCTGCCCCCATTTGGT CTGGCCACGTACAAGATGCAAGGGAATGTGTGGATCTCAGGCCATTGTGGTAGGGACCAAGAGAGGGTAGTTTCACTCTT GAGCGTGGCAGATTCATGGTTAAAGCAACTAAAGGTTCAACAGCATCATGACTTCAACTACTTCAGGGGCATTCGGCATG GCTAA
Protein sequence (LotjaGi3g1v0457900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MILDKGSMQSKSNLDCFLRCTTPVVPSQFLPKHDIRKLNPLWHPWNREAVEYFTLGDLWNCFHECSVYGAGVPITLAKGE TLVQYYVPYLSAIQIFTSNTFREETELGECETRDSYSDSYSDESECDKLWRWDGTSSEEGGFEQDCLWCLHKKMITGLAE RFPGLMSLKSVDLSPASWMAVSWYPIYHIPMGRTIKDLSTSFLTYHTLSSSFQDMDLDDDIEGAHEKRKEGEGISLPPFG LATYKMQGNVWISGHCGRDQERVVSLLSVADSWLKQLKVQQHHDFNYFRGIRHG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 8 | 294 | 287 | 5.6E-141 | – | |
| PANTHER | 8 | 294 | 287 | 5.6E-141 | – | |
| Pfam | 12 | 128 | 117 | 3.6E-31 | ||
| Pfam | 154 | 288 | 135 | 1.5E-52 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0457900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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