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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0459200 |
| Transcript ID | LotjaGi3g1v0459200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | QWRF motif protein (DUF566); TAIR: AT2G20815.1 QWRF motif protein (DUF566); Swiss-Prot: sp|Q8S8I1|QWRF3_ARATH QWRF motif-containing protein 3; TrEMBL-Plants: tr|V7AKJ5|V7AKJ5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0459200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:87370837..87373666) extracted from Lotus japonicus Gifu genome v1.2.
CCGGTTCAGCTTCTTCCTCTCCAAGGAGAAGAAGCTCTGTCACCCTCGCCGATCAAATCGGCAGGGAAAGGATCAGGGAC AGGGAGGATCACCACCTTCATCATCCCCACCACCATCGTCATCAGAATCAGAAGCCTCTCAACACAACACCACCACCAAC ACCGGCAACAACCTCCTCTGTTTTGAGAAAACAGAGAAGCTGCAGGGAGTCCAACAATTCCGAGAACCATTCCAAGGAAA ATGATCGACCCATTATTGGAAGATCAGGGAGGTTCACTTTGCCAGCAAAATCATCTTCATCGGCGAAGAAACCAAGTGTT GGCAATTCCGGCGGTGATTCTCCGGGAAGGGTGTCTCTGGAGAAGAATGCTGCTATTTCTTCAGATGATTCATTGATGAT GAGGAAGGTGATCACTCAGAGGACGTTGAGTAGGACCAATTCACCACTCAATTCGCCGCTGAATTCACCGCTCACTAGGC AATTGAGTTTTTCCAAGTCTCAGTGGGCCTTGTCCCCTGGTAGGTCAAGGCCATCTCCAATGTCAGTGGAAAGCAAGGGA AAGTCCTTGTCTGTTTCGAGCTTGAAGCCTTCTAACATGGGCATTGAGAAGATTATCAACAAGGGCTTTGACTTCTTCAG GTCCAAGAAATCTTCAAATGCTGCTTCCTCCTCCTCTGAGGATGCTCATCAGCTTCGTTTGCTTCATAACCGGTTGCTCC AGTGGCGGTATGTGAATGCTAGGGCTGAAGCTGTGAATGCTAGCATAACCCGTCAGGCAGAGGTATGAAAAGTTTGATTT AGTACACAAATCACATCCTTATCTTGAAAATGAAGGTTTTATTAGAATAATGAGGGATTTGGGTTGCATGTAGTAAAATA ATCTTACATTAACGCAGTCAATACATCTGCATTGTTTATTTGATTAAGATTGTTCGACTTATATATTTCATCAAGAAATT TAGCTTAAGATGGATCATCTAATCTTGATTGAAGGTCTCAGATTGTACTACTGTGTGAATTTAGGGATTCCAATCCAAAT TCAATGAGAGGTAATATGAATAGAACTCTAGACACTAATTATCATGTATTTAGTTCTACGGTTAGAAGTCTCATAATCAT TTACGGGGAGAAGCTACAAGAGTTATGGTGCTTTGGATTGTGTGCTTATCACCAATTCAAACATGGCGTTACATTGAGGT TATGATACTATTAAACCTAACTATTGTAAAAGTGTTTGCTGAATGATGGCACATCAATCATTTATATTATATTTATACCT TGTAGCATGCTTTTGTTTCATTTGCCACTCATTTGGAGTATGTGGACTAATGCTTTTGTGAAATGTGAATGTGTTTAGAG CACTTTGACAAGTGCTGTGGATGGTCTTACAAAGTTGCGATGCTCGGTGATGCAAAAGAGGATACATCTGCAGAAAGTAA GGCTTGAGAAGAAGCTACAATTGGTACTGCAATCTCAGGTGAGTATTGTGATGTGATAGATCTTAAATTACAATTACCTG CTCAAGGAGTAAAAAGAGAAATATTTTTGTTAGATACTGTATCTTTATGAAATTATTGATCCATTATGGTGATTAATTAT TAATAAGTCCTTTCTATTTCTTCATTCCTTTAACAGTACCTCAAAGACATTCCAGTTAAGATATATGCATTTGCAAATGC AGCATTACTTCCAAAAAAATTATTTTTGATCTCCATTTGTGTGTGTGTGTTTTCTTTTTTGTTAGATGAACCTATTGCAA ACTTGGGAAGGTATGGAAAGGAAACACATGGATGCAATTGATGCAATGAAGGGGAGTTTGTATTCTGCTGCATGCAAAGT TCCTCTTTTAGAAGGGGCAAAGGTAACTTCAAATAAAAACAATTAGACCTTATGTCAATATCAAGAAAGCTATATTTACA TAATTATTGTGCTTATAGGTGGATATACAATCAATGTCCAGTGCTCAGGAACATGCACTTGTTGAAGTAGAATCCATCAA GTCAACATTATCAAGTTTTTCACATATGGTAAGTTTGGTAACACTGCACTAATTTTGTTATATTTTGCAAGGACTTAAAC TCTAAATTGAAATTCTTTATAATCAGGCTGATGAGAGTGCTGGGTTGCTATCAGAATTAGCAAAAGTTGTTGCACAAGAG AAGTTTCTCTTACAAGAATTCAATGATCTATCCCAGGCCATTCGTGCTCTGGAGGTAACTAATTAATTATTATTTGTTTC AATGAATAATGATATTTTTGTTATCTTTACTTTTTTTTTTTTAGTTTTTTACGGTGTTCCCTTTAACATGGAAAATGGTT TAGAAGAAAAAAAAGTTACCATTAATTTTTATTGAGTAATGATTCGTGGATATTCATATAGTACAAACATTCAGAGTAAG AAAAAGATAAATGAGAGAAAATTAATAGATATATATGATACATGTGATGTGATAAGAACAAACATTATGTGTCCTTGTGG TGTTTGTAGTGTTGGGATGTCCAGGAATCAATCATCGCTGATTTTCATTACACATGGAATGTTTTATTTAGTGTGTTTTA ATTATTATTATCTTCACTTTGTTTTGGCAGGTAGAAGAAGGTAGCTTGAGGTGTGGTCTCATTCAACTTCAAAATTGAGA TTATCAAAAGTTGCTTCTACTATATATCTAAGATCACTTCTTAGATATATATGTAAATTGTAGACCATCAAAATTAACAG ATATATCAACTGTTTCACAGCCTTCAAATTAGAAGGGTTTAAATTTCAGCAAACATGTAGGAAGGAGTTTACTAAATGTA CCCTTGCACTGCATTTCTTTTCTTACTGGT
CDS sequence (LotjaGi3g1v0459200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGAGGAAGGTGATCACTCAGAGGACGTTGAGTAGGACCAATTCACCACTCAATTCGCCGCTGAATTCACCGCTCAC TAGGCAATTGAGTTTTTCCAAGTCTCAGTGGGCCTTGTCCCCTGGTAGGTCAAGGCCATCTCCAATGTCAGTGGAAAGCA AGGGAAAGTCCTTGTCTGTTTCGAGCTTGAAGCCTTCTAACATGGGCATTGAGAAGATTATCAACAAGGGCTTTGACTTC TTCAGGTCCAAGAAATCTTCAAATGCTGCTTCCTCCTCCTCTGAGGATGCTCATCAGCTTCGTTTGCTTCATAACCGGTT GCTCCAGTGGCGGTATGTGAATGCTAGGGCTGAAGCTGTGAATGCTAGCATAACCCGTCAGGCAGAGAGCACTTTGACAA GTGCTGTGGATGGTCTTACAAAGTTGCGATGCTCGGTGATGCAAAAGAGGATACATCTGCAGAAAGTAAGGCTTGAGAAG AAGCTACAATTGGTACTGCAATCTCAGATGAACCTATTGCAAACTTGGGAAGGTATGGAAAGGAAACACATGGATGCAAT TGATGCAATGAAGGGGAGTTTGTATTCTGCTGCATGCAAAGTTCCTCTTTTAGAAGGGGCAAAGGTGGATATACAATCAA TGTCCAGTGCTCAGGAACATGCACTTGTTGAAGTAGAATCCATCAAGTCAACATTATCAAGTTTTTCACATATGGCTGAT GAGAGTGCTGGGTTGCTATCAGAATTAGCAAAAGTTGTTGCACAAGAGAAGTTTCTCTTACAAGAATTCAATGATCTATC CCAGGCCATTCGTGCTCTGGAGGTAGAAGAAGGTAGCTTGAGGTGTGGTCTCATTCAACTTCAAAATTGA
Protein sequence (LotjaGi3g1v0459200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMRKVITQRTLSRTNSPLNSPLNSPLTRQLSFSKSQWALSPGRSRPSPMSVESKGKSLSVSSLKPSNMGIEKIINKGFDF FRSKKSSNAASSSSEDAHQLRLLHNRLLQWRYVNARAEAVNASITRQAESTLTSAVDGLTKLRCSVMQKRIHLQKVRLEK KLQLVLQSQMNLLQTWEGMERKHMDAIDAMKGSLYSAACKVPLLEGAKVDIQSMSSAQEHALVEVESIKSTLSSFSHMAD ESAGLLSELAKVVAQEKFLLQEFNDLSQAIRALEVEEGSLRCGLIQLQN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 12 | 12 | - | – | |
| MobiDBLite | 1 | 63 | 63 | - | – | |
| MobiDBLite | 7 | 63 | 57 | - | – | |
| PANTHER | 12 | 288 | 277 | 5.7E-100 | – | |
| PANTHER | 12 | 288 | 277 | 5.7E-100 | – | |
| Pfam | 15 | 261 | 247 | 9.5E-69 | ||
| Coils | 256 | 276 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0459200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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