Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0470000 |
| Transcript ID | LotjaGi3g1v0470000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alpha/beta-Hydrolases superfamily protein; TAIR: AT5G06570.3 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9FG13|CXE15_ARATH Probable carboxylesterase 15; TrEMBL-Plants: tr|A0A151RB44|A0A151RB44_CAJCA Putative gibberellin receptor GID1L3; Found in the gene: LotjaGi3g1v0470000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:88556043..88560008) extracted from Lotus japonicus Gifu genome v1.2.
ATCTGGTCGAGCCCGCATTAAAATAATGCATTGAAGATGATAAATAAGGCCCTCTCTCAATTCTAATTTGCCATGCTAGA AATATTTCATTGAAATTTTACCTTCGACAAATAAAAAAAGTTGAACAGAGCACTTTCATTAAACAAAAGAAACCACTTTT GCATCATAGTAGTGTCCAACAAGAAAATGTCACCATGAAGAAAGAGCCACACGAAGATGACAATCCGTGTAAGAACCAAA CCTCTTCTCCCTGCGGCCATGTTTGTCTTACATTGCAACCACGCCTGCAAAGCAAAAGCACTTCCAGAAAACGCCATTCT CATAACAGTTCCTTAAACAAGACAACAATAATTCATGCACCACTTTCATTTCATCAATATAACTTTTTCAACTTCTCTCT TTATCTCTTTATATTCTCAACTAATTTCACTCACACACACTCACAATAGCAATTTCAATACACACTCCCTTTGCTTGCAC AGAAGAAAATGTCCAAAACTGTGGTAGATGACTGTCGTGGTGTCCTTCAGGTCTATAGCGACGGTTCCATAGTTCGCGCT TCGCACCCCGCCTTCAACGTCCCCTACCACGACGACGGTACTGTTTTGTGGAAAGATGTTGTTTTTGACCCTGCAAACGA CCTTCAACTTCGGCTCTATAAGCCAGCCGATTCAACTGGCTCCAAGCTTCCCATTTTTTATTACTTCCATGGCGGTGGCT TCTGCATCGGCTCGCGGACTTGGCTAAATTGCCAAAACTATTGCTCGCAGCTAGCTTGTCAGCTTCGAGCTGTTGTTGTT GCTCCTGATTATCGGCTCGGGCCGGAGAACCGGCTCCCAGCCGCAATTGAGGATGGTTACACAGCTCTAACGTGGCTTCG AGACCAAGCTGTGAGCGCTGATCTGGACCCGTGGTTGAGCGATGTGGCTGATTTTAGCCGGGTTTTTATTTCAGGTGACT CGGCTGGTGGTAACACAGCTCACAATTTAGCAGCTCGGCTTGGGTTTGGGTCGCCCGAGTTGGCGCCGGTTCGGGTTAGG GGTTATGTTATGCTGGCACCTTTCTTTGGTGGAACTGTCCTAACCAAGTCAGAAGCTGAAGGGCCAAAAGATGCTTTTCT CAATTTAGAACTTATTGACAGGTTAATTACTAAATTTGGCGTATGATCTTTTGCAGACCCCAATTTTCACATTATGTTTG CATTCATTAATAATTTAGAGTCGAGTATGATAAAGTCTCGTATATGATAACTTATAGGATTGACTCATCCCTCACCCTAA ATGTTTGTGACCATTGTAAAAATTGTGTCCAAATTTAATAGGTTTTGTGCTCTATTTTTTATTGTTGCTTAACTAGGGAA ATTTCTCTGTGTTTGCATTTGATTGAACAGGTTTTGGAGGCTTTCTTTACCTATTGGGGACAATACTGATCACCCCCTTG TGAATCCATTTGGACCTCGTAGTAAGAGTCTTGAAGAAATTGATCTTGACCCAATTCTGGTGGTGGTTGGAGAAAAAGAT TTGCTTAAAGACAGGGCAAAAGATTATACAATGAGGCTTAAGAATTGGGGTAAAGATATAGAGTATGTGGAATTTGAAGG ACAACAACATGGGTTCTTCACTATTGATCCCAATTCGGAACCATCAAAGAAGTTGATGTTGCTCATCAAACAATTCATAG AGAAGTATTCAGGCAAAGATTAAGTGTTTCATTTCACATGCTGCTGAAACATGGATTATTGTTTATTGAGCTGTTTCACT AGTGAGTATCAACAAGCAAGTTGATGTTGATCATTAGGAAATTTATATGTTTCAGATAGGAATGTTGACAAGTAATTGAA GGGCCAAAAATAACACTCAAGGAATCAAGTGTGCAATATCCAAAAGCTGTGTTGAATAAAAACAATAAAATTAAACTTCC CCTTGCAAGCTAATAAATGCAGCAAATAATTTTCTGAGTCCATGGTAGAGTTGAAAAATGAAATGGATGAGTAACACTCT GTCACGAAACTTTTTAGTTATAATTATTCATGTTGTATTCTTCTCAAAGATTCAACCTCTACAAATCCATTAACAAAACC TTCTAAACCCTTGGACGACGCCTAATGATATGATATCACTGAAATCAAAACCGTTCCCCAATTCTCACCATGGCAAGCGG CGCCTAAGCTTTGACCACAGCTGCGAGTTTTCCATTATCAATCTCTCTCTCTCTCTCTCTCTCGTGTTTCCCCACCGCCA GCTACATGCCTCACCACACCAGGCAGGCTCAATTTGGTCGAGACGTGAACTCATCCCTCCCCAAGCTCAATTGATTACTG CGTTTATATGACTATTGATTTTCGTAATGATTTGGTTCAATTTTTCAGCAGACTCGTGTAAAACATGTCTTTCTGTTCAG AATAACAAAGTTCAATGGCTCGGAACATGTGGCCTCTATTATATTAGTACTGGTATTTATCAGTTTTGCTCTATTTCTTA TTTTGTTCCCAGGAGTTGTTAGATAATTGATTTCACCATACATGTATAGTTGTTTTATGGCAACCTACTTTTCTTTCCCA AGATTGAAAATGAAGATACATGTTATGTTTCTAAAAAACAGATCATGCATGAAGATAAATATCATTTAGCAATTTTTTTG CTGTTTAGATGACTAGCTAATTAACATGGATTTGAATTTTTTGTGTAGGTGGCTGTGGCTCCCATTTTCTGATGCAGCAA CCTGGTAGGAATTTCTACAATGGCTTGGTATGATTTGTTGGAGTTGAGAACTTGAAACCGAGCAATGGATACCAGCTGAA GACCTGGACAGGAAACTTAAAGCATGGTTGCAGCACAAATCATCAGCTCAGTCCCTTCGAAGATCACAACCCATATATTG AAAAACTCACCGGTAGTCAGTGACAAAGGAGAAAGTTTGCAAGGAATAGGTGAAAGTGGCAATGCATTGATAGTTTCATG AAACTGCATTAGAAGCATAGGGGTAGGGCTTGGTGGCGGAAGTAGCAATGCGGCAACTGCAGTATGGGCAGCAAATCGAT TCAGTGGTTGTCCTTCCACATAGAAATAACTCCCATAATGGTCAAGGGAAATTGGATCACATTTTCCCTTCTTTTTCTCT TAGTGAGCAGCCTATTGCACTGGTGGAGGTGAGGTTAGTCCAAATATTAGGTACTTCCTTTCCTGAAATCAGATTTGACA AAAAACAATAAGTTCATTTCTTATTTTTTGTTATCTCTACTTTGTTGGTTCTCATTTGTGTGTTGCTGCTGCCAATTGAT AATACCTGTAACTACTACAATAGATTAGGTTTGTGAGTAGACTTGTGCCACCATTCTGTAATACAACTTAAAGCAGTGGT AGACAATTTTGATAATAATTAATTGTTGAATATATTTGAGCATGTGATACTATTTTGTAATATGGGCAAGTGACCATCAC ATTTTACCCTGAAACATATTGTTTTATATATCACTTCTTAGTGTTTTGAAACGTTAAAGCACAAAGATTATTTTCTGATA TATTTGTAGCCAACAAAATTATTTTTTCTGAGGACAAATTCTTCCTAGGCCTTGCTCAGTGCACCCAAACCTCTCCAAGG ACAACTGCAAGCAGTGCCTTAGAAGTGTTGTGTATCCAAGTTGTATCATTACTTTATTAGATATGATTTCCATTAGTCAG ATATAGAGAGACAAACAAAAAGGACAGAGTCAAAGAGGGCATTCTTTGTAGGTAGGAAGAAATTCATGAATAATATTTTA TTTTTTGTTGCAGCACCAAAATTTATCTTATTCTTTTTATATAGTCCAAATCCCCTGATATATCAAATGCATTTGGACTC AACTTCTACTCATCATTTCATTCTTTACTCAATTTTTCTTGCTGCGCAACGCGCGGGTCTAAGTCTAGTATAAATAGAAT TCAGAATTTTCTACTGTTGTTTTGTCCTTCTCAATTAATGAATGTG
CDS sequence (LotjaGi3g1v0470000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCAAAACTGTGGTAGATGACTGTCGTGGTGTCCTTCAGGTCTATAGCGACGGTTCCATAGTTCGCGCTTCGCACCC CGCCTTCAACGTCCCCTACCACGACGACGGTACTGTTTTGTGGAAAGATGTTGTTTTTGACCCTGCAAACGACCTTCAAC TTCGGCTCTATAAGCCAGCCGATTCAACTGGCTCCAAGCTTCCCATTTTTTATTACTTCCATGGCGGTGGCTTCTGCATC GGCTCGCGGACTTGGCTAAATTGCCAAAACTATTGCTCGCAGCTAGCTTGTCAGCTTCGAGCTGTTGTTGTTGCTCCTGA TTATCGGCTCGGGCCGGAGAACCGGCTCCCAGCCGCAATTGAGGATGGTTACACAGCTCTAACGTGGCTTCGAGACCAAG CTGTGAGCGCTGATCTGGACCCGTGGTTGAGCGATGTGGCTGATTTTAGCCGGGTTTTTATTTCAGGTGACTCGGCTGGT GGTAACACAGCTCACAATTTAGCAGCTCGGCTTGGGTTTGGGTCGCCCGAGTTGGCGCCGGTTCGGGTTAGGGGTTATGT TATGCTGGCACCTTTCTTTGGTGGAACTGTCCTAACCAAGTCAGAAGCTGAAGGGCCAAAAGATGCTTTTCTCAATTTAG AACTTATTGACAGGTTTTGGAGGCTTTCTTTACCTATTGGGGACAATACTGATCACCCCCTTGTGAATCCATTTGGACCT CGTAGTAAGAGTCTTGAAGAAATTGATCTTGACCCAATTCTGGTGGTGGTTGGAGAAAAAGATTTGCTTAAAGACAGGGC AAAAGATTATACAATGAGGCTTAAGAATTGGGGTAAAGATATAGAGTATGTGGAATTTGAAGGACAACAACATGGGTTCT TCACTATTGATCCCAATTCGGAACCATCAAAGAAGTTGATGTTGCTCATCAAACAATTCATAGAGAAGTATTCAGGCAAA GATTAA
Protein sequence (LotjaGi3g1v0470000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSKTVVDDCRGVLQVYSDGSIVRASHPAFNVPYHDDGTVLWKDVVFDPANDLQLRLYKPADSTGSKLPIFYYFHGGGFCI GSRTWLNCQNYCSQLACQLRAVVVAPDYRLGPENRLPAAIEDGYTALTWLRDQAVSADLDPWLSDVADFSRVFISGDSAG GNTAHNLAARLGFGSPELAPVRVRGYVMLAPFFGGTVLTKSEAEGPKDAFLNLELIDRFWRLSLPIGDNTDHPLVNPFGP RSKSLEEIDLDPILVVVGEKDLLKDRAKDYTMRLKNWGKDIEYVEFEGQQHGFFTIDPNSEPSKKLMLLIKQFIEKYSGK D
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 317 | 315 | 3.8E-153 | – | |
| PANTHER | 3 | 317 | 315 | 3.8E-153 | – | |
| SUPERFAMILY | 9 | 317 | 309 | 6.15E-63 | ||
| Gene3D | 13 | 318 | 306 | 3.2E-81 | ||
| Pfam | 71 | 294 | 224 | 5.8E-56 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi3g1v0470000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…