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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0478500 |
| Transcript ID | LotjaGi3g1v0478500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein isoform 1; TAIR: AT2G27590.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q14994|NR1I3_HUMAN Nuclear receptor subfamily 1 group I member 3; TrEMBL-Plants: tr|I3S925|I3S925_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0478500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:89472992..89477162) extracted from Lotus japonicus Gifu genome v1.2.
AGTGGGAACTGGAGTCTATTTTTTTTGCGGCGGAATGGGAAAACGAGAGAAGCAGAAGGTGAAGGAAAAGCATGGAAGAA GTCAACGAGGTAGAGACTACTACCTTCAAGATGAACAACACGACGGTGATGATGAAGATAAACAACACGACGGTGATGCT TACAACAGCGGGGTAGAAGAAACTGAAGACGGTGAAGCCAAAAATCACCAACACCCATCACATGATTTGCCTTCGAAGTT CCTTCTTTATCAGCAATCTGTGCAGGTTTGTGCTAAAAAATTGATGGGGTGTTGTGTGTTTTTGCTCTGATAGAAAAGTT CATAATGTCTCTTGTTATTGCAGTCTCCCAAAGGAGACATAAGTTATTTGCAAAAGTTCTTTCTCATGTACGTCGGTGGA AGGATGCCCCTCCATCTCCAAGAAGATTTCTGTGGCACTGCGTTTCTTAGGTACATTGTACCATTTGTAATTGTGTTTTT TTTTTTAATTCATGCCTATTCAATTTTGTTAATATTCCATTTACAAGTTTGCTTTTGACGTGCTAAAATTGGTTTCTCTT GTGATGAATTGATGCCTTGAAGTTTTCCTTTAAACATTTATTAACATGTTTACTGCATGTTTGAATCAGCATTGTGAAAA TTGATTTTGATAAAATTGATTGAGTTAACATTGAGTTGAAAGTGAAGTGATTTATGTTTGGATACATTTATGGGAAAAAT GATTTATAAAGGGTAATGTTGTGAAACTTAGTTACGAAATCTCATAATTGATTACGTCCACGGTAGAAGCTACTCTCTAT TTTCTCCCAGAATTGGTTTTGGGACTAAAATCAATTCTCTATGTGAATTTCCAAACGTCTATGCAATCACCTAAAAGTGA TTGTGGTCAATCAGAATTGATTTAAAGGATCCAAAACATAGAATCAAACACACTTAAAGAAAGGCATGGTTCAAGATCAC TAATATTACGGGTAAATTAAATGGGTAATGACCACTTGACAGGTATTATTACCATGACTAAGTAAAGGTGTATTATGCAC TTTCACTAGTTATGTGCATACGTTTGTATTCTGGATGTCATCTTATTCCTTAGGATGTTTCAGTTCTAAACTTCTAATTG CTGCTTCGTTTAGGCTTAAAATGCCAGATTAGTATGATCCATTTCAAGGTGGGGTTTTAATTTACTTAATCCTTACCTGA TATGTCTTGTTATTTTATGTCGACCCCAGTCTACCTAATTGGCAAAGGTTTTGTTTGACAGTATGGAATGGCTGCGCAGT GATCCAAGAAAGACAGCAATAGGATTAGATTTGGATCTTGAGGCACTTAATTGGTGCATGGAAAACAACATACCTAAAGT TGGGGCTGATGGGTTTTCTAGAATATCTCTCTTTCATGGGAATGTCCTACAACCTCTTCAATCTAAACTCGTGAAAACGG ATCCCCAGGAGATGGTGAGGAACATTTCGCTCTCACAGAATAGTGAGACTCTGGAGACTGGTGTGCTGGAGTCTGACACT CAAACAAGCTCTGTTGCTCAAGATGTGGAGTTAACAAAGAGAAACTTTCCACTTCCTGGAAGAGATATTGTGTGTGCTTT TAACTACAGCTGCTGCTGTCTACATAAACGAGCAGATCTGATTTTGTATTTCAAGCATGCCCGTGATGCCTTGTCAACTA AAGGTGGAATTTTTGTGATGGATTTGTATGGGGGTTCATCTTCAGAACACAAGTTAAGGCTTCAGAGAAGGTTTCCTAAT TTTACGGTATGATATTCTTGATATTAATATGTAACAATTCATTAGACTAACCAAAAGATGTTGCCATCTATTTGGAATTT CCTTTCAGGGATAATGCGGGTGACTCCACTTTGGTGAACTTGAAAAAAAATTATGAATACACTTACATGGGGAAATACGG AAACAGTACAGATGGTTGATCCATACAGTATAATCACTCTATTCTTTACTAAAATGTTTTCATCCTCATTAAATTTTGTT GCCCTATGATCCATAACTATCCTGCATCCTACGCTTTCCTTGATTTTTTAAACTCATTATAAGTTTTTCTTAATTGACCT ATTGAATTTTACAGGTATATCACAGTTTCACTTCTAACTTTCCAATTCCAGCTCTCTTTTAGCTTCTTATGCTATTGTCT GTAGTGTTTGCCTGACTTCTGTGTTTTTGTATGTGCTTATGATTCTTTGGGCATATAGCATTACATTACATGATACCAAA TTTGAGGAGCATACAACGCTTCAAACGGTGGCACAAGAATAATGTTTTATATTAGAATGACACGTATATATTTAGTACAT TTAAACGAGTATAATCTTGCTATATTTCTTTGTATCAAATATTCAGTAGGGGATTTGAATATTCTCCTGGTCATGGATAA TGTTTTTTAATGTGAAATTTGTTATCAAAATCTGCAGTATGTGTGGGAGCAAGCTGAATTTGATATTATTCAAAGGAAAA CAAGGATTAGTCTCCATTTTCATCTCAAAAAGGAGCAGAGAAAAATTCGTCATGCATTTTCATACAGCTGGCGACTGTAA GTTTTTTTTTTTTCCGACCTTCAATGCATAAAAAGGATATTTTCCATTTTTTGGTGAAAATTGTGCTCAATAGTCAATAG CTCAAGCTTTAATTGTATTCTTTGTTTAGATATAGTATTTTGGTAGTTTCTTACATCATAAAGGGTGTGACTCAGGTGGA CATTGCCTGAGATCAGGGATTGCTTAGAAGAGGCAGGATTTCGGTCTGTTCACTTTTGGATTCGAGAGATGCCAGACACT TCAGAAATTACAAGAACGGAGGGATTTGGTACGGGAAAAGATGTTAAATATGAAGAGACAACAAGTTTTCAGCAACAGGA TTCATGGAACGCTTACATAGTTGGTGTTGCATAGCTTCATCTTAGAAAGTTCAATTTAGTTTCTGACTTTCTGTTGCATT ATCTTGTCATAATGGAAGACAAGAATAACTTGTAACCAGTTTCCTTGCAAGGAGTTTTTTTCTTTTTTTAACTATCTAGT TTCAAATTTAATTTAGTTTGAGATTTTGAATCTTAACAAAGAAACTTTACATTAATCTCAAGTTTGATATGAAAACACTG AGCATGTATTAGTAGTACATATGCAGAAGGTAGAATAATGCAGAGTCCTATGTAATCCAATGAAAATGCCTGAATAAAAA AAGGAGGCAAATGCCATAGCCCCTAAGAAAAGGCAAAAATTTGTATTCAAAAAGCTAAGTTACAAGAAGAATTAACAAAA CTATGACTATAGATATACACTTGATTTGTGATTTAGAAGCTCACAACCAGTGCAACATTAGTCAGTATCATCTTTACAAA ACAAAACAAAACAAAACCGAGTGCATGTTTGGAAAATCTTCTACAATTGATTTTAAAAGTAAAATCAATGCTGGGGATAT ATTTATCAGAGTAGCTTTTAGGTGTCAAAAAAACATAGCGATATTAACATGCTATGTAACTCCAAAGGAACTTGGAGTCA AATTGATGGTTTTGAGAGTTCTTTCTTGATAGCATGAGAATATGTCTCATGTTGATATTTGAGGGTAACTTGCAACAGTT CATCAAGAGGTGTCTTTGGCTTCCAACCTAAACACCAGAGAAATATACATTTATAAGAATGTTAACAAGAATGCTGCAGA ACAATACCACAGATTTAAAAGAATCAATGAATACCAAGCTGCTTGGTGATAAGTGTCATATCAGGGATGCGCCTATCACT GTCATCATAGCCTTTACCATAGAAATCCTCTGAACTCACATCCAGAGTTGATAGACTAGAGGCTGGCACACCAGACACAT TTGCATAAACCTTAATTTTAAAGACAAAATAAGGCAAGGTTGTTAATTATTCTTTGAAACAAAGCATAGAGCCTATTTAG AGACTAGTTTTAGAAAGAGGAAAAAAGTGTGAATACTTTAGTCCCTAAAAGCTATAGGGTGAACGACTTTCATACTCATA CTATGAAAATAAGCAAAATAGTCTCTCAACGATAAGATTAAGAATTTCAGAAAAAAAAAATGGAACGACTAAATAAGCAA AATAGTCTCTCAAAATAAGCAAAATAGTCATTTTTTCATCTTTCAAGGATTATATTGATTTGATTTTCATCTTTTAAGGA CTAAATGTTTC
CDS sequence (LotjaGi3g1v0478500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAAAACGAGAGAAGCAGAAGGTGAAGGAAAAGCATGGAAGAAGTCAACGAGGTAGAGACTACTACCTTCAAGATGA ACAACACGACGGTGATGATGAAGATAAACAACACGACGGTGATGCTTACAACAGCGGGGTAGAAGAAACTGAAGACGGTG AAGCCAAAAATCACCAACACCCATCACATGATTTGCCTTCGAAGTTCCTTCTTTATCAGCAATCTGTGCAGTCTCCCAAA GGAGACATAAGTTATTTGCAAAAGTTCTTTCTCATGTACGTCGGTGGAAGGATGCCCCTCCATCTCCAAGAAGATTTCTG TGGCACTGCGTTTCTTAGTATGGAATGGCTGCGCAGTGATCCAAGAAAGACAGCAATAGGATTAGATTTGGATCTTGAGG CACTTAATTGGTGCATGGAAAACAACATACCTAAAGTTGGGGCTGATGGGTTTTCTAGAATATCTCTCTTTCATGGGAAT GTCCTACAACCTCTTCAATCTAAACTCGTGAAAACGGATCCCCAGGAGATGGTGAGGAACATTTCGCTCTCACAGAATAG TGAGACTCTGGAGACTGGTGTGCTGGAGTCTGACACTCAAACAAGCTCTGTTGCTCAAGATGTGGAGTTAACAAAGAGAA ACTTTCCACTTCCTGGAAGAGATATTGTGTGTGCTTTTAACTACAGCTGCTGCTGTCTACATAAACGAGCAGATCTGATT TTGTATTTCAAGCATGCCCGTGATGCCTTGTCAACTAAAGGTGGAATTTTTGTGATGGATTTGTATGGGGGTTCATCTTC AGAACACAAGTTAAGGCTTCAGAGAAGGTTTCCTAATTTTACGTATGTGTGGGAGCAAGCTGAATTTGATATTATTCAAA GGAAAACAAGGATTAGTCTCCATTTTCATCTCAAAAAGGAGCAGAGAAAAATTCGTCATGCATTTTCATACAGCTGGCGA CTGTGGACATTGCCTGAGATCAGGGATTGCTTAGAAGAGGCAGGATTTCGGTCTGTTCACTTTTGGATTCGAGAGATGCC AGACACTTCAGAAATTACAAGAACGGAGGGATTTGGTACGGGAAAAGATGTTAAATATGAAGAGACAACAAGTTTTCAGC AACAGGATTCATGGAACGCTTACATAGTTGGTGTTGCATAG
Protein sequence (LotjaGi3g1v0478500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGKREKQKVKEKHGRSQRGRDYYLQDEQHDGDDEDKQHDGDAYNSGVEETEDGEAKNHQHPSHDLPSKFLLYQQSVQSPK GDISYLQKFFLMYVGGRMPLHLQEDFCGTAFLSMEWLRSDPRKTAIGLDLDLEALNWCMENNIPKVGADGFSRISLFHGN VLQPLQSKLVKTDPQEMVRNISLSQNSETLETGVLESDTQTSSVAQDVELTKRNFPLPGRDIVCAFNYSCCCLHKRADLI LYFKHARDALSTKGGIFVMDLYGGSSSEHKLRLQRRFPNFTYVWEQAEFDIIQRKTRISLHFHLKKEQRKIRHAFSYSWR LWTLPEIRDCLEEAGFRSVHFWIREMPDTSEITRTEGFGTGKDVKYEETTSFQQQDSWNAYIVGVA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 386 | 386 | 3.1E-189 | – | |
| MobiDBLite | 1 | 64 | 64 | - | – | |
| MobiDBLite | 12 | 63 | 52 | - | – | |
| SUPERFAMILY | 105 | 352 | 248 | 2.56E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0478500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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