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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0480100 |
| Transcript ID | LotjaGi3g1v0480100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 3-oxoacyl-[acyl]-carrier-protein] synthase 3; TAIR: AT2G27770.1 DUF868 family protein (DUF868); Swiss-Prot: sp|O14022|CTA5_SCHPO Cation-transporting ATPase 5; TrEMBL-Plants: tr|I3S1V7|I3S1V7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0480100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:89756098..89760344) extracted from Lotus japonicus Gifu genome v1.2.
TCTTCATTTTTCAACCTTGGCCACTAACGCATGAGATGAGCCTAATTAACCACTCCAAAACATTTTTGCCTTAATTGCTC TTCTTAATGATCACCAAACCCCAGACACCCCTATTAAAGTGCAAAAAACATATTCGTGTGCTGAAATAGAGGATCATCTT TTTTAGCAACCCTTTTTTCTTTCTTTCTTTCTTCTTCTTCTTCTTATCAATTTTTTATTTGTAACATTATCTGTCAGATC AGATTAAATAAAAGTACACCACCGAGGTTTCTGCCTCAACCTTCTAATCTTGTTCTCCTCATCATAAGATGCATAATATT ATAAGATAAGAGAGAGACACACACAAACATAGTTTTGTTTTACCTTCTTCCTCTCAGTTTCCTTTCCCTTGTTCACAAAA CCAAAATCTCCATGTTTCTCATGATTCCCTTATAGAAACTCAAAATCTAAGAAACACCCTTGAATTATTTCTCCAAAGAG TCTAGATATTTGTAAAAAAAATGAGAGACATAGTTTCTTGTTTCAGTGAGAACGCAGTGAATGTGGCTTCTCATTCTTCA TCATGTTCTAGCTATTCTAACAACGCTTGCATCTCTCCAAGTTCAGCACCTTCAATCCAAAACTCAGTTTCTAGTGTCTA CAAGCTAGTTCTGTCTTCAACGTTAAAGCAGTTCTTAATCACTGTCACATGGTGTAAGAGTCACTCCAATCAAGGACTCA GCATAAGCTTTGGTGATGATAATCATGACCCTGCACCTGCCCCTGTACCCTTCAGACTCAACACCAATTCAAGGTTTTTC AGGAAGAAGAAAGGTAGCAAGTTGCTGGATTCTTCTGAGGAAAAGATTGAGATCTTCTGGGATCTGTCAAATGCGAATTA TGATTCTGGACCTGAACCTGTTGATGGGTTTTACGTTTTGATTCTGGTTGATTCAGAAATTGGTCTTGTTCTTGGTGACA TGGCAGGGGAAACAGTGTCCAAGAAGTTCAAAATCAACAGCCCTGTGGCTAAGGTTTCACTATTGTCACGGAGAGAGCAT TGTTCTGGAAATTCTCTTTACACAACCAAGGCTCAATTCTGTGACAGTGGAACATGGCATGATGTTTTGATCAGATGCAG TGTGGAAGAGAGTGAAGGGTTGTTCAAGTCCCCTGTTTTGTCAGTCTGCATTGACAAGAAGACAGTGATCCGGGTGAAGA GGTTGCAGTGGAATTTCAGGGGGAATCAGACAATTTTTGTTGATGGGTTGCTGGTGGATTTGCTTTGGGATGTTCATGAC TGGTTCTTCAATCCAGCTTCTGGGGATGCAGTTTTCATGTTCAGGACTAGAAGTGGATTGGATAGCAGGTTGTGGTTGGA GGAGAAGATTGCACAGAAAGATAAAGACAGAGTTGAATTCTCCTTGTTGATCTATGCCTGTAAGACTTCATAAGGAAACT TGTTTATCTTAGTTTTTTTAACCCTCTTACTATTTTTTTTTTCTTTCTGTTTCCTTCTTCCTTTAACTCTTAATTGTCCT TTCTTCTTGAAAGGATACATACTCATTCATTTTTATCATAGTATAGAGAGAGATAAGTTAGAGTTTCAGAAATTTGAGTT ATAGCATGTAACTGAACTATTATTATAACTTATGGCTTGCATTTCTCTCTGTATATTGGATATCAACCAAAAATAAACAT GTAGTCATAGGAAGAAAAAAATCCTAATTGTTTAGAAGTTTTATCTTAATTTTTGTGCTTTTTGTTTCAAGGAAAAAGAA ATTTGGGTTCATGCGTTTAGAGCATACATTCATTTTTGCATTCACGAAATCAATGAAGCTGTATTGAATTAAGATCGGTT GGCTCATAAATTATAGTATTAAGATTGATTTGAGTTGTCTAATCTTTAATTAAATGACTCATATTCTTTGACTTTGACTG TGTGAATATCGAAATTGTATGAGTGCACTGAGACCCAATTCAAAAAAATCAAGATTATGAGATGGACATGAACAATTTTT TTCTAAAAGTGCAATTGGAGACTTTGATTGGCATAGTTGATTTGCCAAACCTTTATTGGAAATAATAAAGTAACGAATAT TTTGAATATGATTTAGCAGTATCTTGACTTTGCATTCTTATTTACCCTTTGCAATTTTGTTTCTAACTGTAATTTTCCTT TACTGAAACGTTTTTATGATGATAAATGTCCACTAATGAAGGCAAGGTATGATGTGTTACCATTGCTTCTCACAGCAATT TAAAGCTTTACATATAATCAAGCCTATTGCAATTTTACAAAGCATAGGCATGAGTAACTTTAGAAGGAAAAAAATAAAGC TTTGGTTTGGTAGTGTCACTTTCAAATATCAAAATCATTGAAACCATGCTTCAACATTTTAAATAACCTGCTTGTCTTTA CTGGCGTGGTGGAACCTTTGATCATCTATGATGGTCTATTCCTCTGTCCTGAGATGCCTTGACATGTGTTTATGACTGGC TCCATGGTCCCTCCAACTCTCAAGTTCACTTGACAGAAACAAATGATTATAGTTACTTTGGGGATGCATGCATAGTAAAA GAAATAGCATTGATGATTCTCCTTTCTACTTCGTTTAAAATAAAGTAAAGGATGGTTTAGGTAGCTCAAGTGTATTTGGA TAACGATTTGATGTAATGTGAAGACATTTTCATTTTAATTCATGCTAACCTTGGTCCTGGGGCTTTACACCCAAGAGTAT CCTAAATTCACGAAGTTAAGAAATTTGTGTCGGATCAAATGACTTGTATTTTGAGTTATGTTAACCATCTAAATTTGAAG AAACAAATTCATTGACCGCGTAAAATAAAGTTTCTCATCCAAACAAAACCTAACATGTCATCTTTCAATTTTATTTAAAT TTCTTTTTGACTCAAGTATATTATCTCTTCCCAAATAATACCCTTCTATTATGTTTTACATGTTAGGATCATGGCAAGAA GATGGAAGGAATAGCATCTTATGACAATTATTTTACTGATTTTTCATGTTAGGTTTTGTTTGGTGGATGTTGCTTTCATA AGTTGTTAATCTATTTTACACACCCTTTAAGAAGACCGTGCACGCTAATAAAGTGTGGATTCATCAATTTCATTGTATAG GTAAAGTAAATCATGCACCTTGGTTTAGTCTTTGCTATTTTTTCAAATGTTGATTCAGCCACTTAAATCATTGCAAGTTA GGTTTGTTATCACCGCCTTGAAGTTGAAAAGGATCAGCATTAATGAAACCAGGGTCTGATTTCCTAGAAGCACTTGGCTG ATTTATAATTAACTGATTTCCTTAATATACAATCATTGCAATATTGGGATTTGTTACATATCAATATCTCGCTTAATCAC TATGGTTTGGTGCACATTTCTCTTCATTTAGCAAGTACTTTAGGGCTGCATCTACCGTGTGTCAGTTTCAAACACGGTGG ACCAATTACTGTTTCACAGCATAATTACAAAATTGTCCATTTTTTCTTTTCACATTCCATCCTTCTCCTTTTCTCTCACT AAGCCTTGCCACACAACCACCACCAAGTCTGACCGGCCACCACTGCCGCCGCACAATGACCTGGATCTCATCCTTAACCA CTAGAACTTGTAGATATGAGCTTTCCAGATCTTCTCCTTCAACGAGTTCAAGCTTTTCTTCACCGTTGGAATTGAGCTTT CCAGATCTTCTACTTCCAGTTTCCAGACATCAAAAGCCATCACTTTTCACAAATCAAAGAGCAATCCACCATGGCTGCCG CTTTTCCAATCTTAGTCTTAGAGTCACCTCCTCTGGCCACCACAGGTGACCTTTGCATGTCTTTCTCCTCCACCGATATG GCCCTTTGTTCATGTCACCTCCACTGGCTCTCTCTCTCACGCCTGTGTTTCGCTGGTGGCGAATCTAGAAGTTTTGCTGG TGTCTGGTCGGAGATGGTGGCGGATCTGAACAAGGAGCTCGCAGGTCTGATATGGGTATTATTGAATCACAGTTGTTGGT TTGGTTTTTGTTGGAGGAGGAGAGGAGAGAATTTCTGAGTGTGTTAGGGCCGGCTATTGTTGTTTGGTTGGTGCATTTTT CCTTTTTTCCCCTTATTCTGAGCTTCTAATTCATGGTTATGTATGTTGGAGATTTCTCTTCCTTTCCTAGTCAGATTGCT CTCTGATGTGTGTGTGGGTTTGGTGATTGAGTATTATTTTTTTTGCCTGATAAAATTACTTGATTTTTTGTCTCTTTGTT GTCCACC
CDS sequence (LotjaGi3g1v0480100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGAGACATAGTTTCTTGTTTCAGTGAGAACGCAGTGAATGTGGCTTCTCATTCTTCATCATGTTCTAGCTATTCTAA CAACGCTTGCATCTCTCCAAGTTCAGCACCTTCAATCCAAAACTCAGTTTCTAGTGTCTACAAGCTAGTTCTGTCTTCAA CGTTAAAGCAGTTCTTAATCACTGTCACATGGTGTAAGAGTCACTCCAATCAAGGACTCAGCATAAGCTTTGGTGATGAT AATCATGACCCTGCACCTGCCCCTGTACCCTTCAGACTCAACACCAATTCAAGGTTTTTCAGGAAGAAGAAAGGTAGCAA GTTGCTGGATTCTTCTGAGGAAAAGATTGAGATCTTCTGGGATCTGTCAAATGCGAATTATGATTCTGGACCTGAACCTG TTGATGGGTTTTACGTTTTGATTCTGGTTGATTCAGAAATTGGTCTTGTTCTTGGTGACATGGCAGGGGAAACAGTGTCC AAGAAGTTCAAAATCAACAGCCCTGTGGCTAAGGTTTCACTATTGTCACGGAGAGAGCATTGTTCTGGAAATTCTCTTTA CACAACCAAGGCTCAATTCTGTGACAGTGGAACATGGCATGATGTTTTGATCAGATGCAGTGTGGAAGAGAGTGAAGGGT TGTTCAAGTCCCCTGTTTTGTCAGTCTGCATTGACAAGAAGACAGTGATCCGGGTGAAGAGGTTGCAGTGGAATTTCAGG GGGAATCAGACAATTTTTGTTGATGGGTTGCTGGTGGATTTGCTTTGGGATGTTCATGACTGGTTCTTCAATCCAGCTTC TGGGGATGCAGTTTTCATGTTCAGGACTAGAAGTGGATTGGATAGCAGGTTGTGGTTGGAGGAGAAGATTGCACAGAAAG ATAAAGACAGAGTTGAATTCTCCTTGTTGATCTATGCCTGTAAGACTTCATAA
Protein sequence (LotjaGi3g1v0480100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRDIVSCFSENAVNVASHSSSCSSYSNNACISPSSAPSIQNSVSSVYKLVLSSTLKQFLITVTWCKSHSNQGLSISFGDD NHDPAPAPVPFRLNTNSRFFRKKKGSKLLDSSEEKIEIFWDLSNANYDSGPEPVDGFYVLILVDSEIGLVLGDMAGETVS KKFKINSPVAKVSLLSRREHCSGNSLYTTKAQFCDSGTWHDVLIRCSVEESEGLFKSPVLSVCIDKKTVIRVKRLQWNFR GNQTIFVDGLLVDLLWDVHDWFFNPASGDAVFMFRTRSGLDSRLWLEEKIAQKDKDRVEFSLLIYACKTS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 310 | 310 | 5.6E-170 | – | |
| PANTHER | 1 | 310 | 310 | 5.6E-170 | ||
| Pfam | 39 | 308 | 270 | 6.0E-87 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0480100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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