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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0486400 |
| Transcript ID | LotjaGi3g1v0486400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Methyltransferase family protein; TAIR: AT1G08125.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q8C436|MT21D_MOUSE Protein-lysine methyltransferase METTL21D; TrEMBL-Plants: tr|I3STE9|I3STE9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0486400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:90372869..90376973) extracted from Lotus japonicus Gifu genome v1.2.
TAGAAAAATAAAATAAAAATAGTTAAGAATTAAAATGTGTCTCCCTTTCCCTCTTTCAAGTTGTACTCCACCTCGCAGTC TTCACTCTACTGAGTTCAACCTTTCCATCATCAATCACGCTTCAATCTGCAACCCCATTCTTCAAAAGATAGGATCTTTG TTTTCAATTGGTAAGAAACGACGGAAAATTTAGGGATTCAATTATGCCAATTTTTGAAAAAAGTTAGGGTTTTGGTTGGA AAATCATCCCGTTATTCAAGTTTTGGGGACTTAAATCATTCCAAGTGTCTTCCTTTTTATGTATAGTTAATCAATATTTG ATTTTTCTTTTCAGTGATTCAGTGGAAAACTTGTTCTTAAGTGGGAATTAGAGCTTCTAGATTTTCCTTTGTATTGGGGA TTTTTTTTGGCAGACTGTGATCTTATGGAACTTGACAGGTATTCTTCTTAATCATGTTATATGTTTTGTTGGTTTTCAGG AACATTAGCTTATGTGCATGAGCAGGATTTTCTGTTGGTATTGTGAATTTTTTGGGGTATAGACTGCTATAGTGATTGAT CATTTGTTATAATATTATGAACTGCTTGAATTTCTTTCACTTGGCATTTCAAGATTCAATGGCATTTCAAGATTCAATGG CAATGTTTGTAGAACCATGGATATCTGTTATAATTTAAGGTTTCAAGAAATGTGTTAACACAATTTATTGATTGACATAA ATGCTTGAACTTATCTCTAATGCTTGGTCTTTCTGTTGTTCCCTGGGATTAAACTGAGATATGCAGCAGAACATATATTA TAGATTTTATTTCATGATACACTTGGATTGTTTTACAGGTTAAATACCCCAACCACGTTTGAAATGCCGTTGGAGGTTTT GGGTCATGAGTTGCAGTTTTCTCAGGTATTATACTGTTTTTTGAAACTATCTTATTTGGTGTGTGCTTTGAAGAAGGTGT TGTTTTGTGTAATAGGCTAGTGGAACTTGAGTTATGTAATTTTAGTGAAAGTAAATTAATGTGCTGTCAAAGCCTCCTTC TTTTTCGCAAATTATAGATAATAAGATACATAACATATTCTTATAAGCAAGAAAGAGCTATCTTATTTCATACACCTCAT GTCAGCCAAGTCAAAAAATTTGTTTGAGAAGAAATGCAGATTCTGCTAGTAATGAATCTCCTTCTGAAATTTTGAAATCA TGATTGAGCAATGAACATGTAAAACTGTTATACGTTCTCTGAGATATTGTCATATAGCTTTAGCTTCTATGCAGTAGGCA TTGACTTGATTATGATATTATTGGAGATTGACATTTCAATATTTTTTTTATTTCTTTCACATATATTTTTGTATAAAATA TTAAAATGTCTGACAGTGCCAATTTTGTTTTCAATAGGATCCCAATTCCAAGCACTTAGGAACTACTGTATGGGATGCAT CACTTGTGTTTGCCAAGTTTCTTGTAAGTTGTGTATCCTCACATGCTCCGGAAGTTCTGTCTTTAGTTCATGAATGGAAA TTTAATTTGATCCTTAGTTGTAGAAATTTACTTCTTAGTTATGTTCTCAATTATTAAAGCATAGATGATACAGATGAGAA CTTGGTTCAAGACCAAGTTGGAGAATGGTGGTGGTGGTGCGGAGGATATGGAGAACTTGGATGATGCACTTGAAGATGAG GATCTAACTGTGGATCCTTACGATTATAATGTGGCAGATTTGTTAGATTAGATAAAAAAAATTCATGTTTAAGTTTTATG GTATTTGCCTATTTGGATCTAAGTACTTTGTGGCTTATGTATAAGTGTTGTGCTATTTTGGTATATGGATTTAAGTACCT TGTTATTTATGCTATTTTTTATGCATATATATGATTAACTGTCCCCTTCCAATTAAAGGCATAATCCCGATTCTGACTAC CTTGGATACAAGGACACACTGTATCATATGGGAGAATGGCCAGAACTCTAAACTACATTAATCTTTTAAAAGAAAGCGTT TAGATCACCTGTATCACCAATAGGCTATTTCGTTCTACAAATTTTACATTTAGTTTCTTTTTTTTTATGCTATATTACAT TTAGTTTCTGTTGCTTTGTAATATTTCTAAATTACCATTATTTTAATTCATTATGATGTGTCTTATATTGTTTTAGGAAC GGAATTGCAGAAAGGGAAGGTTTTCACCTGCTAAACTTAAAGGGAAACGTGTCATTGAACTAGGAGCTGGCTGTGGTGTT TCTGGGTTTGGTGAGATTCCAAATTATTGCTAAAAAATATATTAATTGAGTTGATTAACTTTGCTTATAGTCGATTCCAC GAAATGAAAAAAAGGCGTTGGTTGAAAATTGATGTAGCCTTACCCAATATTTAGTTCTCTGGTAGGTAGGTATTAGGTAA TGCCTATCTGATCTACACTTCCTTTGCAGGCATGGCTTTACTGGGGTGTGATGTCGTAGTGACCGACCAAAAAGAAGTTC TACCGTTGTTACAAAGAAATGTTGAGCGTAATGTTTCAAGGGTCATGCAAAAGAGTCCTGGTTTGATATGAAACATTTGA ACCATCCTCACTTCAATTATTAACATTTGCACTTAATCTTTGATGAATCTGTTATGTGGATTTGAATGATAGTTGTATTT TACTGGAAAATTCATTGTTTCTAGAGTCATTTGGTTCAATCAAGGTTTCAGAGCTTCAGTGGGGAGACGATAGTCACATT AAAGCTGTTGATCCTCCATTTGACTACATTATTGGCACTGACGTTGTAAGTATTAAACAGGCCTCTCTGCAAACAGAGAA GAATGAACATCAGTCAACTCATTATCAAATTGTTGGAGTTTAAGTATTATTCATCAACCTGTGGATCATTAAGCTACTTT CTATTCTGTTGTATTCCATTGAAGGTTTATGTAGAGCATCTACTGGAACCCCTATTGCAGACAATACTTGCTTTATCTGG ACCTAGGACTACAATCTTGGTATTTATTCAATTATTTTATTGTTCAATTATGCACTCCTTACGGTAGAGTTGGATAATTC ACCTTTCTTTTTTTTTTTTTAATTTTTGCATGAAGTTGGGCTATGAGATCCGTAACACACAGGTCCATGAGAAGATGCTT CAGATGTGGAAAGAAAATTTTGATGTGAAGACTGTCTCGAAATCTAAGGTATGCTATATTTGTTCTATTGACATTCATAC ATCTATGTGCTGATTTCAGCTTGGTTAACTATTTGAAATTGCAACTAAATCTTCACATTCTGCAGATGGATGAAACATAT CAACATCCGAGTATTCAACTCTTCATTATGGGATCAAAACTTTCGGCAGAGTGCAGAGAGAAATCAGGTCAGGCTACTTC TGGAAAAGATGATCTCGAAATTGGCATGGAGGATAAAAACAGTGAGGAAAATGTTGTTATAGAAGGATCTGGTCATGTTG AAGAAAATGTTGAGGATCATGCTAAGTCAATCCCCCAAAATGGAAAGCTTAGTGAGTGGGAAGCCAGAAGGTATGGCGCA GTGGCTGCAAGGATTTTGCGAAATGTAAAAATATCCTAGTTCTGAGAATTGCTCCCAGAGGTTTTTGGTCATATGAAATA TGGTAGTGGTCATGTGTTTTACTAGTTAGAAAAGGCATTGGTTGTTGTGGCTGTTATTGCATCCATTATTTCATTAACTA GTCATATATTTAGATTTGGGTGTTTGAATCTTGTAGTTTATAACATAGGCCCTATCTTCCGCTCTCTCTCTCTCTCTCTT CCCCACTTCCTTCCTCATCATCTCTTCTGTCTTCTTTGTCATTGTGCTCCTCCTTTAAAAAAAATTATTGATGTTCGAGT TCTATGTCTATCACATGTGATTGTATCTTTTCTTACCAGTATTAAATTGGATAAAAGTGAATGAAACTTTTCTCATGGAC TAGAATGAAAGTCTATTCACTTTGAACTCATGAGGCATCTAAACACACTTCTTCATTGAGTTTGTGTCTTTCACTCTTTC CTATTCAAACAAATTTTGTATATTGGTTCATACTTTTTTCTAAAAGGCAGTCCAGCTACACTCACGAGTTGATCTCTATT TTGGGGAGCATTGCAACAACCTATA
CDS sequence (LotjaGi3g1v0486400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAACTTGACAGGTTAAATACCCCAACCACGTTTGAAATGCCGTTGGAGGTTTTGGGTCATGAGTTGCAGTTTTCTCA GGATCCCAATTCCAAGCACTTAGGAACTACTGTATGGGATGCATCACTTGTGTTTGCCAAGTTTCTTGAACGGAATTGCA GAAAGGGAAGGTTTTCACCTGCTAAACTTAAAGGGAAACGTGTCATTGAACTAGGAGCTGGCTGTGGTGTTTCTGGGTTT GGCATGGCTTTACTGGGGTGTGATGTCGTAGTGACCGACCAAAAAGAAGTTCTACCGTTGTTACAAAGAAATGTTGAGCG TAATGTTTCAAGGGTCATGCAAAAGAGTCCTGAGTCATTTGGTTCAATCAAGGTTTCAGAGCTTCAGTGGGGAGACGATA GTCACATTAAAGCTGTTGATCCTCCATTTGACTACATTATTGGCACTGACGTTGTTTATGTAGAGCATCTACTGGAACCC CTATTGCAGACAATACTTGCTTTATCTGGACCTAGGACTACAATCTTGTTGGGCTATGAGATCCGTAACACACAGGTCCA TGAGAAGATGCTTCAGATGTGGAAAGAAAATTTTGATGTGAAGACTGTCTCGAAATCTAAGATGGATGAAACATATCAAC ATCCGAGTATTCAACTCTTCATTATGGGATCAAAACTTTCGGCAGAGTGCAGAGAGAAATCAGGTCAGGCTACTTCTGGA AAAGATGATCTCGAAATTGGCATGGAGGATAAAAACAGTGAGGAAAATGTTGTTATAGAAGGATCTGGTCATGTTGAAGA AAATGTTGAGGATCATGCTAAGTCAATCCCCCAAAATGGAAAGCTTAGTGAGTGGGAAGCCAGAAGGTATGGCGCAGTGG CTGCAAGGATTTTGCGAAATGTAAAAATATCCTAG
Protein sequence (LotjaGi3g1v0486400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MELDRLNTPTTFEMPLEVLGHELQFSQDPNSKHLGTTVWDASLVFAKFLERNCRKGRFSPAKLKGKRVIELGAGCGVSGF GMALLGCDVVVTDQKEVLPLLQRNVERNVSRVMQKSPESFGSIKVSELQWGDDSHIKAVDPPFDYIIGTDVVYVEHLLEP LLQTILALSGPRTTILLGYEIRNTQVHEKMLQMWKENFDVKTVSKSKMDETYQHPSIQLFIMGSKLSAECREKSGQATSG KDDLEIGMEDKNSEENVVIEGSGHVEENVEDHAKSIPQNGKLSEWEARRYGAVAARILRNVKIS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 236 | 231 | 7.9E-105 | – | |
| PANTHER | 6 | 236 | 231 | 7.9E-105 | – | |
| Gene3D | 12 | 228 | 217 | 2.5E-57 | – | |
| Pfam | 21 | 187 | 167 | 2.2E-34 | ||
| SUPERFAMILY | 61 | 189 | 129 | 3.13E-13 | ||
| CDD | 67 | 181 | 115 | 0.00140053 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0486400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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