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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0486400 |
| Transcript ID | LotjaGi3g1v0486400.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Methyltransferase family protein; TAIR: AT1G08125.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q9H867|MT21D_HUMAN Protein-lysine methyltransferase METTL21D; TrEMBL-Plants: tr|I3STE9|I3STE9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0486400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:90373691..90376427) extracted from Lotus japonicus Gifu genome v1.2.
TTGGATTGTTTTACAGGTTAAATACCCCAACCACGTTTGAAATGCCGTTGGAGGTTTTGGGTCATGAGTTGCAGTTTTCT CAGGTATTATACTGTTTTTTGAAACTATCTTATTTGGTGTGTGCTTTGAAGAAGGTGTTGTTTTGTGTAATAGGCTAGTG GAACTTGAGTTATGTAATTTTAGTGAAAGTAAATTAATGTGCTGTCAAAGCCTCCTTCTTTTTCGCAAATTATAGATAAT AAGATACATAACATATTCTTATAAGCAAGAAAGAGCTATCTTATTTCATACACCTCATGTCAGCCAAGTCAAAAAATTTG TTTGAGAAGAAATGCAGATTCTGCTAGTAATGAATCTCCTTCTGAAATTTTGAAATCATGATTGAGCAATGAACATGTAA AACTGTTATACGTTCTCTGAGATATTGTCATATAGCTTTAGCTTCTATGCAGTAGGCATTGACTTGATTATGATATTATT GGAGATTGACATTTCAATATTTTTTTTATTTCTTTCACATATATTTTTGTATAAAATATTAAAATGTCTGACAGTGCCAA TTTTGTTTTCAATAGGATCCCAATTCCAAGCACTTAGGAACTACTGTATGGGATGCATCACTTGTGTTTGCCAAGTTTCT TGTAAGTTGTGTATCCTCACATGCTCCGGAAGTTCTGTCTTTAGTTCATGAATGGAAATTTAATTTGATCCTTAGTTGTA GAAATTTACTTCTTAGTTATGTTCTCAATTATTAAAGCATAGATGATACAGATGAGAACTTGGTTCAAGACCAAGTTGGA GAATGGTGGTGGTGGTGCGGAGGATATGGAGAACTTGGATGATGCACTTGAAGATGAGGATCTAACTGTGGATCCTTACG ATTATAATGTGGCAGATTTGTTAGATTAGATAAAAAAAATTCATGTTTAAGTTTTATGGTATTTGCCTATTTGGATCTAA GTACTTTGTGGCTTATGTATAAGTGTTGTGCTATTTTGGTATATGGATTTAAGTACCTTGTTATTTATGCTATTTTTTAT GCATATATATGATTAACTGTCCCCTTCCAATTAAAGGCATAATCCCGATTCTGACTACCTTGGATACAAGGACACACTGT ATCATATGGGAGAATGGCCAGAACTCTAAACTACATTAATCTTTTAAAAGAAAGCGTTTAGATCACCTGTATCACCAATA GGCTATTTCGTTCTACAAATTTTACATTTAGTTTCTTTTTTTTTATGCTATATTACATTTAGTTTCTGTTGCTTTGTAAT ATTTCTAAATTACCATTATTTTAATTCATTATGATGTGTCTTATATTGTTTTAGGAACGGAATTGCAGAAAGGGAAGGTT TTCACCTGCTAAACTTAAAGGGAAACGTGTCATTGAACTAGGAGCTGGCTGTGGTGTTTCTGGGTTTGGTGAGATTCCAA ATTATTGCTAAAAAATATATTAATTGAGTTGATTAACTTTGCTTATAGTCGATTCCACGAAATGAAAAAAAGGCGTTGGT TGAAAATTGATGTAGCCTTACCCAATATTTAGTTCTCTGGTAGGTAGGTATTAGGTAATGCCTATCTGATCTACACTTCC TTTGCAGGCATGGCTTTACTGGGGTGTGATGTCGTAGTGACCGACCAAAAAGAAGTTCTACCGTTGTTACAAAGAAATGT TGAGCGTAATGTTTCAAGGGTCATGCAAAAGAGTCCTGGTTTGATATGAAACATTTGAACCATCCTCACTTCAATTATTA ACATTTGCACTTAATCTTTGATGAATCTGTTATGTGGATTTGAATGATAGTTGTATTTTACTGGAAAATTCATTGTTTCT AGAGTCATTTGGTTCAATCAAGGTTTCAGAGCTTCAGTGGGGAGACGATAGTCACATTAAAGCTGTTGATCCTCCATTTG ACTACATTATTGGCACTGACGTTGTAAGTATTAAACAGGCCTCTCTGCAAACAGAGAAGAATGAACATCAGTCAACTCAT TATCAAATTGTTGGAGTTTAAGTATTATTCATCAACCTGTGGATCATTAAGCTACTTTCTATTCTGTTGTATTCCATTGA AGGTTTATGTAGAGCATCTACTGGAACCCCTATTGCAGACAATACTTGCTTTATCTGGACCTAGGACTACAATCTTGGTA TTTATTCAATTATTTTATTGTTCAATTATGCACTCCTTACGGTAGAGTTGGATAATTCACCTTTCTTTTTTTTTTTTTAA TTTTTGCATGAAGTTGGGCTATGAGATCCGTAACACACAGGTCCATGAGAAGATGCTTCAGATGTGGAAAGAAAATTTTG ATGTGAAGACTGTCTCGAAATCTAAGGTATGCTATATTTGTTCTATTGACATTCATACATCTATGTGCTGATTTCAGCTT GGTTAACTATTTGAAATTGCAACTAAATCTTCACATTCTGCAGATGGATGAAACATATCAACATCCGAGTATTCAACTCT TCATTATGGGATCAAAACTTTCGGCAGAGTGCAGAGAGAAATCAGGTCAGGCTACTTCTGGAAAAGATGATCTCGAAATT GGCATGGAGGATAAAAACAGTGAGGAAAATGTTGTTATAGAAGGATCTGGTCATGTTGAAGAAAATGTTGAGGATCATGC TAAGTCAATCCCCCAAAATGGAAAGCTTAGTGAGTGGGAAGCCAGAAGGTATGGCGCAGTGGCTGCAAGGATTTTGCGAA ATGTAAAAATATCCTAG
CDS sequence (LotjaGi3g1v0486400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCGTTGGAGGTTTTGGGTCATGAGTTGCAGTTTTCTCAGGATCCCAATTCCAAGCACTTAGGAACTACTGTATGGGA TGCATCACTTGTGTTTGCCAAGTTTCTTGAACGGAATTGCAGAAAGGGAAGGTTTTCACCTGCTAAACTTAAAGGGAAAC GTGTCATTGAACTAGGAGCTGGCTGTGGTGTTTCTGGGTTTGGCATGGCTTTACTGGGGTGTGATGTCGTAGTGACCGAC CAAAAAGAAGTTCTACCGTTGTTACAAAGAAATGTTGAGCGTAATGTTTCAAGGGTCATGCAAAAGAGTCCTGAGTCATT TGGTTCAATCAAGGTTTCAGAGCTTCAGTGGGGAGACGATAGTCACATTAAAGCTGTTGATCCTCCATTTGACTACATTA TTGGCACTGACGTTGTTTATGTAGAGCATCTACTGGAACCCCTATTGCAGACAATACTTGCTTTATCTGGACCTAGGACT ACAATCTTGTTGGGCTATGAGATCCGTAACACACAGGTCCATGAGAAGATGCTTCAGATGTGGAAAGAAAATTTTGATGT GAAGACTGTCTCGAAATCTAAGATGGATGAAACATATCAACATCCGAGTATTCAACTCTTCATTATGGGATCAAAACTTT CGGCAGAGTGCAGAGAGAAATCAGGTCAGGCTACTTCTGGAAAAGATGATCTCGAAATTGGCATGGAGGATAAAAACAGT GAGGAAAATGTTGTTATAGAAGGATCTGGTCATGTTGAAGAAAATGTTGAGGATCATGCTAAGTCAATCCCCCAAAATGG AAAGCTTAGTGAGTGGGAAGCCAGAAGGTATGGCGCAGTGGCTGCAAGGATTTTGCGAAATGTAAAAATATCCTAG
Protein sequence (LotjaGi3g1v0486400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPLEVLGHELQFSQDPNSKHLGTTVWDASLVFAKFLERNCRKGRFSPAKLKGKRVIELGAGCGVSGFGMALLGCDVVVTD QKEVLPLLQRNVERNVSRVMQKSPESFGSIKVSELQWGDDSHIKAVDPPFDYIIGTDVVYVEHLLEPLLQTILALSGPRT TILLGYEIRNTQVHEKMLQMWKENFDVKTVSKSKMDETYQHPSIQLFIMGSKLSAECREKSGQATSGKDDLEIGMEDKNS EENVVIEGSGHVEENVEDHAKSIPQNGKLSEWEARRYGAVAARILRNVKIS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 223 | 223 | 6.6E-102 | – | |
| PANTHER | 1 | 223 | 223 | 6.6E-102 | – | |
| Gene3D | 5 | 215 | 211 | 2.5E-57 | – | |
| Pfam | 8 | 174 | 167 | 1.9E-34 | ||
| SUPERFAMILY | 48 | 176 | 129 | 2.79E-13 | ||
| CDD | 54 | 168 | 115 | 0.00139469 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0486400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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