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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0504700 |
| Transcript ID | LotjaGi3g1v0504700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plastid division protein PDV2; TAIR: AT2G16070.2 plastid division2; Swiss-Prot: sp|Q9XII1|PDV2_ARATH Plastid division protein PDV2; TrEMBL-Plants: tr|I3SS07|I3SS07_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0504700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:92250561..92253071) extracted from Lotus japonicus Gifu genome v1.2.
ATTGGTGGAATGAAAATGGCAGTACATGTGAAGGATAGATTTCCCACCACTGAGAACACAGATAGTGATAGAAGTAGAAC AGCCATTTTGGCGGTTTTGTATTTCATTTTCATTTGTGAATGAAACACAACACTTTCCATTTGAAATTCACAAAATTATT AAAATTATCAAAATTGGAATCACATAACATCATAAACATAAAGTGTCCCTCATTTTAGGTCATAGAAAAAACACAACACA AGAACACAAACAAACAAAAGACAGAGAGAGAAAGCAATGGAAGAGGAAGGAATAGGGTTGGTGTTGGCGAGAGCCACAGA ACTTAGGTTGAAGATCAGCAATTGCATCAACACAACCACCACCGCCGCCACCCCTAATGGCCTCTCACCACACGCCGCCG CCGATGACGACGATGACAATGATGATGACTCCTCCACTGACAGGCTTCTCAACATTTGTGATGCCTTTGAAGCATTGGAG ACCCAACTCTCTTCCTTGCAGGTACCCTCAATTTTCTTTCACTTTTTTCTGTATAAAAGTTTACATTTTTACTAAATGGG GATTGTGGGTTGTCATTGTTCATTCAATTCACATGGGTCATCTTTTCTTATTTTTTTTCTTAGATAAGGTTTTATGTTCA ATATATGCTGCTTCAACCACTGTGTTTGAGATTTGGCTGCTTGTTTTAGAGTGTATTTTAGTAAACCCATAATTGAATTT GTTGCTACATTTGATTATAGTAATTGAACCCTTGGCCTTTCCATGTCTCCAAGTTGTGAAAATTGTTGTTTGCTTGCTTC ATATTTGGCAATGGAGGTAGCTGCTCTGGTCTATAATGTTTGGTTAAGTCCTACCAACCACCATACAAATTTGCAATGTG TTTGTAGCCAAGCATGTTTTAGATTGCAAGTGATTCCTGATTATTTTATTTTGGAAACTTAGTAGAAATGTCATTGCTTT CTTAACACTTTCAGTTTCCTTGCATATTTGTATTCTTATTCGTGACCTAGCAAAGATACTATGTGAAATGGAACTTATTG GAACTAGTGATGAATATAACTTTAGTCTTCCACCCTCTTAGGCTCTTTACCACTATGTGTCACTACAAGAATATGATTCT CCTAGTTGTTTATGAGTACAAGGCTATGATCATTGAACTTGTAATGGTATTTGCAAGATGATTTGTAACTTTTTTCCTTT TTTCTCTTAAGATATTTTATTCTTGTGATATAATATTGTGGTGTGGTTTAATTCATGTCGCTCACCGCATTTAGTGATAA AAGCCTTATGTTGCTGTTGTTGTTGATTGTAATTGCTATGGGAAAGTAATCAAAATATGGTTGCGATAATAGTCTGGGAA TCCTAAGTGCTTGTGTGCAATTTACAGGTCCTGCAACAACAGCAGCGGTATGAAAGAGAAGTTGCCTTGGCAGAGATTGA AAACAGTCGCAAAATGTTAATTGCTAAGCTCAAGGAGTATAAAGGTAAGGAATTGGAAGTGATACATGAAGCCTCTACTT TTGCAAGTGAAACAGTGGAGCCGAACAATGATCTACTACTTCCTCCGTATCCAAGTCGTCCTCCATACTCGATATCTCTG GACAAGGAATATATGTCACAGATCCCTTCTGTGAATAAGCCTGGTCGCAATGGGTTAATCACGCTTGATTCAGTGGTTGA GACAAAAAAGAGTCATACTGAAACAGAGCAAAACCATGTTGAAGATGGGGCTAAAAATTCAAGAAAAGGATTGGGATTTT TCATAACTTCTGCTGCCAAAACAATGCTAACAGTTGTTGGTGTGGTATCAATATTAAGTTTATCTGGATTTGGGCCCAGG TTTGGTAAGATAGGCATTCGTTTCAGCGCACAAGGCTGGCGTCACAGGCTAGAAAATGAAAGTGAGGGATCTACCACTGA AAATAAGAGTGAGAGGCCAGTTACTCAGTGTCCACCTGGGAGGATCTTGGTGCTGGAAAATGGGGAAGCTCGGTGTCTTG TGAAAGAGAGAGTTGAAATTCCATTCTCAGCTGTTTCTGCAACACCTGATATAAACTATGGATGTGGTTAAGAATAGTAT TCATTCTCTGTATTGTATATTATTTTACTCCCCCACCCCTCCTTTCTCTTTTTTTCTTTTTGTCAATATGCCAAAAAATT ATATTCAGTGCCTGATTGTCTTTATTTTTGTCAGTTGAGGGAACTGTCTTATTCTTTTAGTTGATACTCAGGTAAGTAAG TGATGCAGATGGTCATTTGTTTCAAAAATTGGAGAAATTTTGATATCAAATGTGTGTAAGGCTAAGAGGTTTTCAACTCA ATTCTATAGATTTTATTCATTTTCTTGTTTTGAAGTTTGTGTGTGTGAATGTTTGTTTGCAAAACATACAACCAAACCTA AATTGTTTCCAAGGATGAGTTGTTGATTACTCTGTTTGTTTTTGGAAAGTCAGGGTCAATCTCAAGAAACTTAGGATAAA TTTGGAATTGAAAATGATTTGTAAGCTTTAA
CDS sequence (LotjaGi3g1v0504700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGAGGAAGGAATAGGGTTGGTGTTGGCGAGAGCCACAGAACTTAGGTTGAAGATCAGCAATTGCATCAACACAAC CACCACCGCCGCCACCCCTAATGGCCTCTCACCACACGCCGCCGCCGATGACGACGATGACAATGATGATGACTCCTCCA CTGACAGGCTTCTCAACATTTGTGATGCCTTTGAAGCATTGGAGACCCAACTCTCTTCCTTGCAGGTCCTGCAACAACAG CAGCGGTATGAAAGAGAAGTTGCCTTGGCAGAGATTGAAAACAGTCGCAAAATGTTAATTGCTAAGCTCAAGGAGTATAA AGGTAAGGAATTGGAAGTGATACATGAAGCCTCTACTTTTGCAAGTGAAACAGTGGAGCCGAACAATGATCTACTACTTC CTCCGTATCCAAGTCGTCCTCCATACTCGATATCTCTGGACAAGGAATATATGTCACAGATCCCTTCTGTGAATAAGCCT GGTCGCAATGGGTTAATCACGCTTGATTCAGTGGTTGAGACAAAAAAGAGTCATACTGAAACAGAGCAAAACCATGTTGA AGATGGGGCTAAAAATTCAAGAAAAGGATTGGGATTTTTCATAACTTCTGCTGCCAAAACAATGCTAACAGTTGTTGGTG TGGTATCAATATTAAGTTTATCTGGATTTGGGCCCAGGTTTGGTAAGATAGGCATTCGTTTCAGCGCACAAGGCTGGCGT CACAGGCTAGAAAATGAAAGTGAGGGATCTACCACTGAAAATAAGAGTGAGAGGCCAGTTACTCAGTGTCCACCTGGGAG GATCTTGGTGCTGGAAAATGGGGAAGCTCGGTGTCTTGTGAAAGAGAGAGTTGAAATTCCATTCTCAGCTGTTTCTGCAA CACCTGATATAAACTATGGATGTGGTTAA
Protein sequence (LotjaGi3g1v0504700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEEEGIGLVLARATELRLKISNCINTTTTAATPNGLSPHAAADDDDDNDDDSSTDRLLNICDAFEALETQLSSLQVLQQQ QRYEREVALAEIENSRKMLIAKLKEYKGKELEVIHEASTFASETVEPNNDLLLPPYPSRPPYSISLDKEYMSQIPSVNKP GRNGLITLDSVVETKKSHTETEQNHVEDGAKNSRKGLGFFITSAAKTMLTVVGVVSILSLSGFGPRFGKIGIRFSAQGWR HRLENESEGSTTENKSERPVTQCPPGRILVLENGEARCLVKERVEIPFSAVSATPDINYGCG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 302 | 302 | 5.7E-123 | – | |
| PANTHER | 1 | 302 | 302 | 5.7E-123 | ||
| MobiDBLite | 28 | 54 | 27 | - | – | |
| Coils | 89 | 109 | 21 | - | – | |
| MobiDBLite | 243 | 263 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Chloroplast fission | The division of a chloroplast within a cell to form two or more separate chloroplast compartments. This division occurs independently of mitosis. |
Expression pattern of LotjaGi3g1v0504700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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