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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0505200 |
| Transcript ID | LotjaGi3g1v0505200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Methyltransferase-like protein; TAIR: AT4G34360.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q9VIK9|MET13_DROME Methyltransferase-like protein 13; TrEMBL-Plants: tr|I1LJH5|I1LJH5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0505200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:92278373..92281159) extracted from Lotus japonicus Gifu genome v1.2.
CGGTACTGGTGTGGAAGGGTTTATCTTGCTAGGGTTTGTGACTTGGGATTCGAAGTCAATCGGAATCGGAATAATGGAAG AGAGGCACCCAACTTCAACTGCATTGGAGTATCTTAATCCTTCGTACTGGTAATCATCACCGATCAATTATCAAAACTTG CTCTGCTAATTTATTTTCTACAATTTCTCGAAAATTTGAATGCTCCTTCGTCACAGGGATGAGAGATTCTCGAAGGAGGA GAAATACGAATGGTTCAAAGATTATTCCCATTTCCGTCACCTGATTCAACCTCATCTCACACCCCATTCATCTGTAAGAA TCACTCTGCAATACGAATGGTTTGAATTTGTGCTACAGTTCAACTATAATGTTGTTGAAGTTCATTTGCATTGTTGCAGG TGCTGGAACTTGGATGTGGAAACTCACAAATGTCTGAAGACTTGTATAAAGATGGAACAACCAACATAACATGTATTGAC CTTTCATCTATTGCAGTTGACAATATGCAGAAACGGTTACTTTCCCGGGGACTCAGAGGTTAGCTTGCTGATCAATTGAT TACCTGGGTATTAGTATATATATGATTATCAGTGCTTGGTTTCTTTTACAATCTGTATGTTGCTTGCTAATCACAATTGT TTCAATGGTAAATTTTACTTGAATCATTGGATTTAGTCCAAAAGAAGAGGTAGGAGGTATCAGATATAAAATCATTAATT AATGTGCTTTCACTAAGTAACTTGAGCTTTTAGGAGCTTGGTTTAGCAACTTAGGCTAACTTGAGCTTTTGGGATGTTGG TTTAGCAACTTAAGATTTTGGGATTTTGGCTCATGAGTTGTGAATGGAGGTTTAAAAGAATTATTGTTATTGGTGGACAT GTTGGTTCACTTAGTCCCTCATGTGCATCTGTGCACTTTCTTACAAACTCAGTGCTCTCTTAAAAGAATTATCATTGTTG GATAATGGAACTTCATCGCTGATACTTAGATTCTTAACAGAAAATATAAGTGCTATCTGCTTGGCAGGGGTTTTGCCACA TCCTTGCTTGGAGTAGTTGGTAGACATGATGATTGATTGCATTGTTATATAATTATTTTTTATTAACTATTACTATTGAT TTTGTCATGTAACTCTTGTGTCATTTGTTATGTAGTTTTTATTGTTACATTTTTTTATACATTTCTTCATTTCTGTGAGT AGACATAAAAGTGCTGCAAGCTGATATGCTAGAGCTACCTTTTGACGATGAGTGTTTTGATTTGGTTATTGAGAAAGGAA CTATGGTAAATTAAATGGTTTTCCTTTAACTTGTATTGGAACTTTTGCTTTATATTGTAAACTAATAATTATGACTCCAA AAATTTGAAAGTTTTTTGAAGTTTTAAGGGTTAAATGTGAATATTTTATCTTTGATTTTGTAGGATGTATTGTTCGTGGA CAGTGGTGACCCATGGAATCCTAAGCCTGAAACTATATCCAAGGTCATGGCCACATTGAAAGGTGTTCATAGGGTTTTGA AAGCAAATGGCACATTTATCTCCATAACTTTTGGCCAGGTTTCAAGAATGAATTGTTATTTTTGTCTATTTTAATCGGTC CTCTGATTCTAATATACTTAAAATTTATGCCAGCCACATTTCAGGCGTCCTATATTCAATGCAGCAGACTTCAGCTGGTC TGTTGAGTACACTTCTTTTGGTGAAACCTTTCACTATTTTGTCTATGTTCTGAAGAAGGTTAGTCCATATGGCTTCACTT TTTTATTTTTCTTATGATGATGAAAACAAATGTCTGTTGTTGCTGTATTAAGGTACTGCTACCAAGACTTGAACATGACC ATTTCTAGAGTGAGCACACTTTTTGTTTCTTCAAATTTCTTAAAAGAGAATCATTATTGTACTTCTCTGACCAATTTGAT GTCAATTTAAGGACTAACTTGGTGTACAAAATGTCGCAATAATCTTTGGAAGATCAAAATAGAGACATTGTACTCCACTG TTCACTAGAAAAATATGCATTTGAGAACTACTTTTTTGCAATGATTATAAAATGACACTTTCTGTTTCTCATGACAATCA CAATATTTCATCATGAGAAGTGACAGTACTGTTCTTTTTTCCCTTTTTTCTTTGCTAATCATGGAGGAGGGGGGGGGGGA TACAATCTCTTCCCCAAGTTTCATGGGGAGTCAGGTTACCACCTTAGTATTTCTCAAGTTGTAAATTCTGTCCTGGTTTA GGGTAGTAAATGCATGAGAATTTGATAAGGATTATGATTCATATGCTTGAAGTTTTACTCTTCTGCTTTTGTGTTTTAAC TATGATAGACGAAAAAATTTCAGGGACAGAGGTCATCATATGAGGATATACAACTTAAGAGGTTCGAAGCACCACGCATT AATCTATTTCATGAAGAGTTAGAAAGTGAAGATTTTGCTTTCCGAATCAATGTTGATGAGTTGAACAATTAGACTTTATT TTATAAAGTTTTTTTTGTCAATTTTTATTTCATTTGCTTGTTGCAATTTTGATCCACTTACATCAAAGGAAGAATGTATC TTATTCTTAACTATTGAGGCTTTAGGCATACTGATGTTGTACCAAAATAGTAACTCTAGTTTGTTAAAAAGTATATGATA TTATGAGAGGTCTTAATTCTTAAGTTGCTATGCATGAGCATGAGCATGGTCTAGGCAAAGTACCTTACCACTTACCAGCC TACTAAGGCCCCGATGTTCAATTGTTTGGTCACTAGACAACATAGAAATGCTATTCGAGTTTATCAA
CDS sequence (LotjaGi3g1v0505200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGAGAGGCACCCAACTTCAACTGCATTGGAGTATCTTAATCCTTCGTACTGGGATGAGAGATTCTCGAAGGAGGA GAAATACGAATGGTTCAAAGATTATTCCCATTTCCGTCACCTGATTCAACCTCATCTCACACCCCATTCATCTGTGCTGG AACTTGGATGTGGAAACTCACAAATGTCTGAAGACTTGTATAAAGATGGAACAACCAACATAACATGTATTGACCTTTCA TCTATTGCAGTTGACAATATGCAGAAACGGTTACTTTCCCGGGGACTCAGAGACATAAAAGTGCTGCAAGCTGATATGCT AGAGCTACCTTTTGACGATGAGTGTTTTGATTTGGTTATTGAGAAAGGAACTATGGATGTATTGTTCGTGGACAGTGGTG ACCCATGGAATCCTAAGCCTGAAACTATATCCAAGGTCATGGCCACATTGAAAGGTGTTCATAGGGTTTTGAAAGCAAAT GGCACATTTATCTCCATAACTTTTGGCCAGCCACATTTCAGGCGTCCTATATTCAATGCAGCAGACTTCAGCTGGTCTGT TGAGTACACTTCTTTTGGTGAAACCTTTCACTATTTTGTCTATGTTCTGAAGAAGGGACAGAGGTCATCATATGAGGATA TACAACTTAAGAGGTTCGAAGCACCACGCATTAATCTATTTCATGAAGAGTTAGAAAGTGAAGATTTTGCTTTCCGAATC AATGTTGATGAGTTGAACAATTAG
Protein sequence (LotjaGi3g1v0505200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEERHPTSTALEYLNPSYWDERFSKEEKYEWFKDYSHFRHLIQPHLTPHSSVLELGCGNSQMSEDLYKDGTTNITCIDLS SIAVDNMQKRLLSRGLRDIKVLQADMLELPFDDECFDLVIEKGTMDVLFVDSGDPWNPKPETISKVMATLKGVHRVLKAN GTFISITFGQPHFRRPIFNAADFSWSVEYTSFGETFHYFVYVLKKGQRSSYEDIQLKRFEAPRINLFHEELESEDFAFRI NVDELNN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 9 | 234 | 226 | 5.9E-69 | – | |
| PANTHER | 9 | 234 | 226 | 5.9E-69 | – | |
| Gene3D | 11 | 221 | 211 | 3.4E-65 | – | |
| SUPERFAMILY | 15 | 205 | 191 | 5.17E-28 | ||
| Pfam | 49 | 168 | 120 | 2.9E-15 | ||
| CDD | 52 | 168 | 117 | 1.39453E-11 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0505200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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