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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0506300 |
| Transcript ID | LotjaGi3g1v0506300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | G-box-binding factor, putative; TAIR: AT4G36730.2 G-box binding factor 1; Swiss-Prot: sp|P42774|GBF1_ARATH G-box-binding factor 1; TrEMBL-Plants: tr|A0A0L9V722|A0A0L9V722_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0506300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:92354701..92363115) extracted from Lotus japonicus Gifu genome v1.2.
CACTCAGGTAGCTTGTTGAGTTTCATGGAGCCACATGAAAACGACAATTTCGCTAAAAGTCATCAAAACATGCCTCAAAA TGTAAGTAATTAAACTTGTTTCATACCATCTCACTAATTTTTTCATGCAGCAATCTCTATGATACCCTCTAATTCCCTTC ATTTTTTTTCCTAACAGAAACCAATGAGCCTACCATCACCATGGTCTACTTCTGGCCGTCTCAATTCAGCCAGTCCTAAC TTTCAACCATTCTCATTGGAAAATCAGGTAGTGAATTACATAACGCCTGTTTGATTGCAGTTTTAGGGTCTGTTTGATTG CAGTTTTAGGGTCTGTTTCATTGCAGTTTTTTAAATGAGGTAGTGAATTACATAGGGCCTGTTTGATTGCAATTTTAGGG TCTGTTTGATTGTAGTTTTTGTTTTCTGCTTTTAAAATAGTTTTTAAAATTAGGTAGTGAATTACATAGGGCATGTTTGA TTGCAGTTCTAGGGTCTGTTTGATTGCAGTTTTTATTTTTTAGTTTTTAAAACAATTTTCAAAACCAAATTTTTAAAAAC AGTTTTCAGAAGAAGAAAACAATTTGAATGACATGTTTTCCAAAATTTAGAAAACTGATATCTGAAAACTAAAAACAGAA ACAGAAAACATATTTTTGTTGTTTTGGTTTTTTAGTTTAAAAAATTGAAAATGAGAAAACAAGTCGTATCAAATAGGTTT TCAAAAATTGTTTTGAAAACTGCAAACAAACAGACATATTCATCCATCTTACATATAATGTGCTTTGATCATGATGAAGG GATTTTTCTGTTACTTCATTTTGATGTTATATATATTTCCTCGACTCAAGCATTTTATAAAGTTGTGTGTTTGATTTTCA AATGAGTTTCAAGTCTCGCATTTTAAAAAAAATTAGTTAGTTGAGAATTATATAAAGATGTGGAGCCTGTTTGGTTGTAG TTTTATTTTCAGTTTTTAAAAACAATTTTCAGAAACAATTTTTAAAAACAGTTTTTAGAAGATGAAAACAAGTTGAATGA CATGTTTTCCAACATTTAGAAAACTGATATCTGAAAACTAAAACCTGAAAACATCTTTTAGCTGTTTTGATTTTTTATTT TAAAAACTGAAAATGGGAACTGTTTTCAAAAAAAGGTTTTGAAAACTATTTTGAAAACAAAAAACAAACTGGCCTAGGGT GTCTGTTTTTCTTTCTGGTGTTTTTGATTGACCCGTTGGTTTACGATCTCATGTTTTAAACTTCCTTTTATCCTCAATTG TGGTCTTAGAGTCGATGGTTCAATTCTCGAGTAATTCCCTAAAAATGATGGTTAGTTTGTGGGGTTTGGACCAGATTGTG GAGCCAATTTTTTACTTAGTGTCGTCCCATGTTTGTGGAGCCTTTGTGTTTGACTCTATGTAATAATAATTTTGTTGTCA GTTTATACTTGAAGATAATTTCTATTTGAGATGGAAAAATTATTGAGTTTTCAAGTGTTATAAGCAATGAGACTCGCAAA TACAGTGCATTAAGGTTTTGAGTAAAAATATGTTATTTTTTCTTGATGGTCTCCTTTGTTGGCTCGTTGGTGCATGTTCC CTTGCTTTGCACTTCCTTACATCCTCAACACACTCTCATACTTTTTTCTTGCAAATGTTTATTAAATTCAAGTTGCTAGT TGCTTTAGATGTTGTGGAATTTAAGTAAACTTTTTGCCGGAGGCTTTTGCAATTGTTGATGGATTAAACATATGTTTCAT ATGCTTAAGAAACTTCCATAGTGAATAAGTATACATGGTTGTATTAATGCATATGATATAACTGCTCTTACAGGCTGATC AGGGTGCTTCACTGCCTCCTTCAGAAGAAGCACAAATGACTTTTAGCGAATTCCTGGAGTTTGTGAACAAAAACGAGGAT AATTTACAACCTATGTGCATACTAAATGCTGAATCAGAAATATATGCGAAAATGTCTCCAATCTCAAAACCCAACTGGTA AGGAGAAACATGGAAGTACATCTATTCCTTGGTGAACCTCTTTGATTACTTTACTTCAAACTTATTTTGCAAATTATACG TGCACAGTGCTGCAAGTGAGAACATGGGATCATCATCAGATGTAGGTTATGAGATTAACAATGTTGGTGGAGCAACAAAA ACTTTAATCAAGGTGAATTCAGAACCAAACAATGGAAATGATCATTTTATTGAATTGCTCAAAATAATTGTTTGATCCTT TTTAATGTAGGATCTCTCTTCAACTATGAAGCAGCAATCTAACATGATGCATGGAAATGGTATGTTTGTAGTTAATGAAT TTGTACTTTCTTATATAAAAGAAAAGTTGTATTTTATGATCTGAGATTTGAATAGGAATAGATGCAGAGAAGGTTACTAG TAATGTTGACTCTGAGAACACAAATCTTGCATCGCACTATTTGATAATGGATCCAACTGAACTGGACCAAAATTTGGGCC AAGATGTTAGTGCACCTGACACTACTCCTCAGCCTGAAATCCAGGTACCGAAAATTGTTATATCTTTTAGTATTTCATAT TAAAATTAAATTAGCTTTTCATTTACCATTTATGAACTACGAGAGGTGTTTTTTTTAAGTTATATTTGTTTTAACAATCA ATGTTATATTTCATTACCCTAAAAAAAAGTTATATTTCATTAAGACTTATAAAAAATGTTTTATTAAGGCGAAAACCCTT AAATTTTTAAGTCTTTCTTCAAATCTCAAATTTAGAATTAACAGTTTTTCTTGACTCGTCAACTAGAAATATATCATCTG CAAACATCTTGTAGTTAGGAATGCTATTTTGTATATTTCTGGTAAGCACGTCCAAAAACATATTAAACATGTACAGGCTT AGTGGTGTGCCTTGATGTAAACTTAACCTTATAGGGAAGTCTTTAGTCGTCTGCTAGGTAGACACACTAGTTGTTGCACC CTGAAAGGCTTAAAATACGGAACGCTGAAAATTCAAGATGACTAAAGACTTCCCTATGAGTGATACATGGAGAGCTAAAA CTCATTTTTATATTTTACATTTTCTTACTCACAGCGCTGTTGGGTCCTTGCATCCTTGTAAAGCCTTAAAATACTCATTT TTATATTTTGCATTTTCTTACACACTTTCATTTCCCCCACCAAAATTCTTATATATCAATCTAAAACTTTTAGATATGCT CAATGCTTCTTTGGCATCCTCCTAATATTTTCAAACATATCATCCTAAATCCTAAATGAGATTAACATTACCTTGTGCCT CTCAATTAACTTCCTCAACTAATTTTCTCTTAAAAGTTAAAAGTTTCTCTCCCTAAACTGTCATCACTTAATTCTTGAAT TTGTAACTTGTCAAGTTTTCCTTTTCCGCCTCTTGAACAAATATTAACCGGAAAAAGAAATATTTACATAGAAGGATAGA CCATTCATAATTACCTTGGAGGAACTCTGCGGTTACCAATTAACCTATAGTGGGTTAAAAATAATATAGTTTTGATTTTA AAAATATAACTAGTTTATAATTGCATGCTTATTCTGTGATTAACCTCGTTGATAACCCAACTTTACTTTTGTTACATGGT CATTTTGTTACACCATCTATATGGACTATGGTCTGATTTATTTAAATGTCATGATTTTGGAAGGGCATCTTTGTCCCGAT ATCTCTTTATAAAAAAATTTCAAACAGTAATCATCTTAAGGTTGCTCCATTTATTTCTTGACAGGTAAGTGACAAAAAGG GAAAAGAGAGAAAAAGGAAGTCTAATAGGGATCTGCCAAAAAAATCAATGAATCCGGAACAGGTATATGATATAATATTA GAGATGGGTGAAATATTTTGTTGGAAGTCTTTTTTAAAACAACGAAAACATTGTGAATTATTGGTGCAATTAAATAACCC TCAAGTAATTAAACCAACTCTTTATTATGCTATTTCTTTTATTCAGAAGACTCCTCTTTAGAACTAATAATTTTCTTGAA CACTTTAAGCTTTGCTCTTTGAAAGAGTTTAGTCACAATATCAACAATTTGATTCTTAGAGCCATAGTGTTATAAGCTTA CTTTCTTTGACTACTAAAGTTCATCTTTTGGGTCATGCTTCAATTGCTTTAACGAATCTAACTTTGTTGATGTTCGCTTA ATTATCAACATACAAAGAAACAATCAGTTTTTGATTACTTGGCTTGTTTACAAGTTACCAAGTTTCATTTTTCTCGATCA TATATATTCAACCCTCTTGCATAGAAACTCTCATTTGGGCTTGTAGATTTTGCATAACCCAAAGGTTCATGTGTGTACTG GCATTTCGCTGTTGTCTTCTAGGGTTTGTTCCCACATCCTGCTTGTGGCGCCACCGCAGGGGGTCTTCTTCCCCTCGGGC CTCGGGGTTTCCCTTCCACTAGGAACTCCTTCCCCCCCCCCCCCCCACAATAGGTGGCCTGGTAACCCAAGTAAGTGAGT TTTTTTTTGTGTTTTTAGTCTAGGTCTTCTTCCTTCATCTTCACCCTCGCCTCACATTGTTGTCGTTGTTGGTCCCGCAC TACTAGTCTTGCCTCGCTGCTGCTCTGTCGTCGCCCCCAACCACTGGTCTACGATGCCTAGTCCTTCTGCCACCTCCCCC ACTAGTTTAGATGACTCCCCTGCGGCTCCACCCTTTGGGTTATTTCCTCTTAAGCTTCATAATACAAGCCCCAAACCATT ATAATGTGTTTTCATGAAGCGTATTAGCAGAGTTTTTTTTATAAGCAGATTTAGTGACGCTACTTTCTCTCCATCAAGGC AAAACGAAGCAATATTGGAGTATTCTTGCTAGATGGGGTTTTGGAGCACTCGATCCGCCTCTGAATTGGTGGTTTCTCTA TTGTTTTCTTTACCATATTGTTATGAGTTCTGTCACATTATGTTGTTGGCTAAATAGCATGCTAGCTTTGGTTGTATTGT GTATCTGTGCTATGGAGAAGTGCTAGCCTATTTCCACGGTTGAGTTATTTGGCTTTTGTCTCGATCCGCCTAAGTGTCGC TTGACTTGACTTTTTGCCTTAATCTTACAAACAATTATTTATTTTTTATATATATTCTTAAGAAGTTAAGGAGGATGGGC CGAACCCAAGTCAAACGGATTAACCAACAATGATTACTGGGCCCAACAATGTTTTCTTTCTGGGCCCAACCTAGCCTCCC CTCTCATCTTACGACCAAAAATATTAGAAGCCTCCCCTCTCATCTCTTTCTGTTGGGAACGTGAAGGCAAGGCGCTGCAC GCGGCGGAGTATGGAGGCGGTGTGGTGGCTTGAGGTTCTCCTATTATGACGGTGTAGTGACAGGCCCATGGTATAGGATA AAGTGTTCAAAGCATTCAATCAGTTTTGTGCATACACACTTACTACCATTGTATATGCATGGTGGTAAAATATTTACCTG GTTGAGATGTTGCTGCACTAGAATCTTAACAAGACTACGTCCTCCTCTTCTTGTATTCTTTGCTTAATGCAAGCTCCCTC TTCTCTTTGTTTCTCACTGCTCCTCTGATCCTTCTCTTTTTCTCTTGCTCTCACACTCTCAGAATTGTGGTTCAAAGATG GAATTCTCAACTCTCACGTTATGCAACATTCTGCCTTCTCTGCTCTCAGATATTCCTTTTCTTGCTTGCTCTGATATTGT GATCTGATGGTGTAATTTGGTATTTTACAATTTGCCCAATATTCTTTCCCTTTTTGTTTTCTCCCTTTTTTGTTATTTTT TTTTTAAATTTAATTTTCGGTTATGGTTACTTTGGGGAAGTTCATTGAAAATGTTGTCCTCATGTGTCATATGATTTGTG CATCCACTCTCAATAAACCAAACTCCTTTGCTATTGTTTTCATGTAGCTCAACAACTTGTGCATGTTGTTCTGGTTTGTT TGCTCTATTTTTGCAAACATTTTCCACATGGCCAGGCTGATTGCAAGCTCTGCGTTTCACTCCTGGTCCAAACCAACATA AGTTTTCTATATGATTGGCCTTCTTAAAATGAGAGCAGGTTAAATATTTTCGTTTCCAACCTCCTTCTGTGGTACTTGTT ACAAAAGCACCTTTAACTTTTTCTCACATCTGCATAGTCCTTCTTTGTTCAGTGGCATAGAAAGAATTAACAGGCTTTGA AACTGAGGGGATCGGAAAAATCTTATTTTCTTCAAGGGATGAGATTTTTGACTCGAACTTCTCTGGAAAGCACTAGAACT TTCTTCATCATTCTTTGATCACTAAGATCTTCACCTAGCAACCTGATCTGTATGACCACATTTGAAAGTTTGTATGAAAA CTCCTTCACTTTTTCAGCTTATTTCATTTTGATGGCTTCAAACTCTCTTCTAAGGATTAAAAGTTAAAACCTTCATTCTC CTTGTTCTTTCACTCCTATTTGGATTTGTCCCAAGCTTCTTTTGTTGTTTTAAGATTCAGAATTTTGATAAACACATCAT CATATAGAGTTGCATGTAAAATGGTAATGACGCCCTTTACCATTTTTCATGGTAAAACATTATTTGATTCACAGTTGGGT TATCCGGTAGAGGGGCTAGATTGCACCCATCTAGTACCACTTTCCACAAACTGTGTGCTTTTAAATAAGATTTCATCTTT GCAGCCCACAAATTATAGTTTTCTCCAACAAACATTGGAGGTGGAGGCAAAGAAAAATTGTTGGAAGCCATACTATTGGT TGTTGGTTATTGCTTTTTTGGTTGGTATGAGTTGTTCTTATCGAGTTTCACTCACTCAAAGATTGTAATAGATCGATGAA GCTTTTGATAGCATGTTAAGAAAACAAATTACACATGGAAAATATCATAAAATTAAACACCGACAAGGGACTTACAAGTG AAAAGAGAGTACTGCTATAAGATCTTCTTTTGTTATAAGTTATTCATTGATAACTTACAAGTATTTATCATTTAATGACA GGCCACATGCATGAATAGCTTTGCAAATCGAAAGACAGTAAAAGAAAATAAACATTTTTTAATACATAGAATTACTAAGT CATTAGTACTTACTAAGACTCTTACGTTAGGCTATCTTGACTATTTAGATAATTATAGCTAAGATAGAGAAATTAAATGT CCAAAATCTAACAATTTCCCCTTATTTTTTGTATGACTAACCTTGGCAGGAAGAATTAATAAAGCATCGTAAAAGAGTGG ATAAACTCTTACTTAAGAACGAAGAGCTAAAGGAAAAAATTGACCATCTTTCTCAGGAGTGTCTGAATCTCATAAATGAA AATGATTCCTTACAGGTTTGTCATTCAAATTTCAATTTCTTCAATTTGTTTTTTATGAGAGATGAAATCATTAAAATTTG ACCATTTGGTTTATGGGATAGTATAATTGGACACCAAGTATTAAACTTGTATTTTTTTTTTGAAAATAGTATTAAACTTG TATACTTACACTACTTTATAACTTTTTCTACACTATGAAATTAATCGATCCAACTATTGATTTGTTATATTATTATGATA ATCATGCATTCAAAATTTCATATAGCTTAGACATTAATAGGTACAGTTTAATAGGGGAAATTTACTTATATTTGAATAAC ACATTATACATTAAGTTATATGATGAAGTACTAATCAGTATTTATTTATATGAAAAATTGTAAGTTTGATATACTTTATA AAAAAACTTTTTCTACCAAAAAAAAACTTCATAAAAAACTTTTAACTCGACTTAAATTGAATAGTTCCATTAAAAAAATG CTTAAATATGTTATTAGTCACTGACAGTTAGGGATGATTCTAAATTGGTCTCCATAAAAAAAAATCATAGCTTTTGCTTC TTGAATTTTTCTTATGTTTGAAATCAGTTAAAATGTTGTCACTTTGCCAACAAGTCATAAATTTCACTGTGTCACAACAT GTCATAAATTTCTCTGTGTCACCTTCCTACGTATGATTTCATTAATCCTACATGTGTAGAAGCTTTTTAAGCAAGAACAC CCTCTATTCCCAATCATTTGCCTTCTTCAAATTTATTTCTTCTCCATCATTCCCGGCTTCTTCTCCATAATTTGATTAGT GAAATGACACGTAGGAAGGTGACAAGATAAATTTGCTCTTTTATTTTTTTTTATTCGCTACGGGGCTAACGCCCCTTTCT TTGCTCTGTTTGTGCTTTATATATAAAACTACAACTTTTTTAGTATCTGATTTGGTGTATTGTATCAACAGAAAGAACTC ACTGAGAAGTATGGGGCAGAAGTAGTAACAGAGATGCTCGAGAACTTCAATTCAAGCATTTGAATGGGAGCTGATTGAAA CAACAGTGAAGGAATGCAACTTATCAGAATCTATATTTATTTGAAATTACATTTATAAGCTAGACTTTCAAATACTGGCT TATAGAAACTCCTGA
CDS sequence (LotjaGi3g1v0506300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGCCACATGAAAACGACAATTTCGCTAAAAGTCATCAAAACATGCCTCAAAATAAACCAATGAGCCTACCATCACC ATGGTCTACTTCTGGCCGTCTCAATTCAGCCAGTCCTAACTTTCAACCATTCTCATTGGAAAATCAGGCTGATCAGGGTG CTTCACTGCCTCCTTCAGAAGAAGCACAAATGACTTTTAGCGAATTCCTGGAGTTTGTGAACAAAAACGAGGATAATTTA CAACCTATGTGCATACTAAATGCTGAATCAGAAATATATGCGAAAATGTCTCCAATCTCAAAACCCAACTGTGCTGCAAG TGAGAACATGGGATCATCATCAGATGTAGGTTATGAGATTAACAATGTTGGTGGAGCAACAAAAACTTTAATCAAGGATC TCTCTTCAACTATGAAGCAGCAATCTAACATGATGCATGGAAATGGAATAGATGCAGAGAAGGTTACTAGTAATGTTGAC TCTGAGAACACAAATCTTGCATCGCACTATTTGATAATGGATCCAACTGAACTGGACCAAAATTTGGGCCAAGATGTTAG TGCACCTGACACTACTCCTCAGCCTGAAATCCAGGTAAGTGACAAAAAGGGAAAAGAGAGAAAAAGGAAGTCTAATAGGG ATCTGCCAAAAAAATCAATGAATCCGGAACAGGAAGAATTAATAAAGCATCGTAAAAGAGTGGATAAACTCTTACTTAAG AACGAAGAGCTAAAGGAAAAAATTGACCATCTTTCTCAGGAGTGTCTGAATCTCATAAATGAAAATGATTCCTTACAGAA AGAACTCACTGAGAAGTATGGGGCAGAAGTAGTAACAGAGATGCTCGAGAACTTCAATTCAAGCATTTGA
Protein sequence (LotjaGi3g1v0506300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEPHENDNFAKSHQNMPQNKPMSLPSPWSTSGRLNSASPNFQPFSLENQADQGASLPPSEEAQMTFSEFLEFVNKNEDNL QPMCILNAESEIYAKMSPISKPNCAASENMGSSSDVGYEINNVGGATKTLIKDLSSTMKQQSNMMHGNGIDAEKVTSNVD SENTNLASHYLIMDPTELDQNLGQDVSAPDTTPQPEIQVSDKKGKERKRKSNRDLPKKSMNPEQEELIKHRKRVDKLLLK NEELKEKIDHLSQECLNLINENDSLQKELTEKYGAEVVTEMLENFNSSI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 61 | 61 | - | – | |
| MobiDBLite | 10 | 61 | 52 | - | – | |
| PANTHER | 26 | 282 | 257 | 9.0E-21 | – | |
| PANTHER | 26 | 282 | 257 | 9.0E-21 | – | |
| MobiDBLite | 180 | 198 | 19 | - | – | |
| MobiDBLite | 180 | 228 | 49 | - | – | |
| MobiDBLite | 199 | 228 | 30 | - | – | |
| Coils | 227 | 268 | 42 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0506300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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