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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0514100 |
| Transcript ID | LotjaGi3g1v0514100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Altered inheritance of mitochondria protein; TAIR: AT3G51100.1 altered inheritance of mitochondria protein; Swiss-Prot: sp|B1W0Z7|G6PI_STRGG Glucose-6-phosphate isomerase; TrEMBL-Plants: tr|I3RZS0|I3RZS0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0514100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:93129282..93133732) extracted from Lotus japonicus Gifu genome v1.2.
CCAACCCAAAACGCATTCGTCTTGTGTCGTTTAGAGATTGAGTGTAGAAAAAATGGGAATATTATTATTATAGGAGGAAA AAAAACAAGCTCCTCTGTTAATTCATGGCGGTCACCGGAGAAGAAGCTGCAACAACAGCAGAAGCTGGAGGCGGTGGTGG TTGCGGCCAGCATCGGAATCCCAATTCTAACGGCGGCAACCCGAATCCAAATCCGGATCCTAACCCGAACCCGATTGTTA CCGGATCCAAAGGAAAATCGTGTAAGGGTTGCGCATACTACTCGTCGCTTCATAAATCCAAATCTAAAAACCCTACTTGC ATTGGCTTCTCCAGAACGCTCCATCAAGGTCTCTTTCGAAATCCCTCGCTGTTTGTTACTCTTTGATTTTGATTTTTTTG TGTTCGATTTCGTGAAAGCTTGTTTATCGGTAAAAGTAGAAAAATGCATTGATTGAAATTTTGGGGGTGCAAGTTAGATT CAGATTGATAGAAAAATCAATTGTTTTATTGGTTATATGCATGGAATTGATGTAAGGGAATGGAAGCATGTGAGTTTGAT TTTGAATGTCTCAGGATGTTGAATTATCTAGGTTCTTCAATGTGGAATTCCAGCTTACTCTTGATTGGTTATGCAGAAGA GTAAAATAGGTTCGACAATATAAGAATATTAGAGATTTGATAGTGTGGAATAGAGTTCGATGTGAGTGTTACTTCATTAT GATAGATGATTGAGAGATTGGACATTGGTCAGTTTATATACATGGCTCAATAGTATAATTACATATCTGAATCTAACAGA AAAGACTAACTAACAACTACACAACAGAGTTTAGCAAACGAACTGATTACAACTACTAGAACTTCCGTAACTGTAAGTTT GACACAGATTATCCCATGGCCTCTCAATAGCCTATTTCAAATGTTGATATCCTTTGGCCTTTACTGTCATCATCATTAAT ATTTCTTATAAGTCATGACTACAGACTACCTAGACCGTTTCTGATAGACTGAAATTCTCTATCAAGCTAGAACCTATGTA AGATGACATTGCGTTTTATTGTTTTGGCTTTGTGAAACGTGGGGGGTAGCGGCTTTTTCTTTCCTTGACAGTTAGCTTGT ACTTGAAGTCATTTAAAATCAATATTGTAATCCTTGCTCTTGAGAAAATCATTTAGAGTATTTCCTGGTAAAAGAGGGGA GCTGAGAAATGGAGAGTGAGTCTGGATAGACTAACCTTGATAGAGGTAATGTGAGACTGAGTTTTTAAAAGAGATGGGAT TGAGAGAAATGTGAATAAAGAAGAAACATACGTGAGAAGCATTGGTAGCATTAATAAAATAACAAGGGCAAAACAGCCAT TCATTAATTAAAACTCAAACCCTATTTTTTTTTTTGGTACAACTCAAACCCTATTAAATCCAACCAACTTTGAAGGGATA TTAATTTAAATAATTAAATTAGATGGATTTCCAAATTAAACCAATTATCAATCCAATATTAAGACATTTTAAACAAAAAA TATCATTTTCAAAGTGAACCACTTCTTAAAATATAGATTTTGGTTGCTGTAGTTTTATATTTCTTTTGACTTGTATTTAA TTGTTATCATTATCTTGATTTATAAGAGTTTAATCATATTTTTATTTTGATGCTCTTATGTATAATCAGTACCCCCATAT GTTGTGGGAGAAACTGAACTGGAAGCTTCTAAAGAGGGCCGCAGCCTTGCAAACTTCAAGTATGCTTGTATTGGATACTC TGTCTACTTAGACAACAAAGATTCTTCAGCTGACTCACAAGATAAAACTGCAAAATTGCCGTTTTGCGTTGGTCTTGAGG TTATATATCTGAAACTTTTTTCACTTGTATTTGATGTATATGCAGAACACATGTTGATCTTGTTCCAAGGGTTTTTTTGG AGTTTGGACATATTTTGTGTAATTTAGAGTTCTATAAAGCATCAATTTATTATGGGAGTCAAATAAAAAACTGGTGAGGC TATTAAAAGATAACATTAAATGATTAAATGGAGACTTAGAGAGAATGGGGGTGAGGAGGGAGGTAGTGCAGAAGTAAGCA CTTCAATTATATTCCAAGAAAATTTGGTCTAAGCTTCTGAGAAACAATATTAACACATGTTTCAGGTGGTCTTGGAGGAG AAGTCTGCAACTTCACCTGTTGGCCATGTTCCTGCTCATCCACGTAAAGCTGAAGGTATTAATTTCTTGGTTTTTCTTTT ATTACAGTTCCTAGGTTGTTTTCTTCTTTTTCAACTAGTCGTCATTAACTTACAAAATGAATAACAACAGATATAAATAT TTAAAAGCCTTAGCATATTTGGATAATTCTCTTGCTTCTTGGAGTTGGAGATCCTCCAGTTTGTGTTCCTCTACGCATCT CCGATAACTTCTCCCCATACGTTACTGGAATTTTTTCATGCAAAGTCATAGAAGCAGCAAGACATCTTATCTGTTGTTTG TTTTTTCTATCATTCTCAAGATAGGTAGAAATGATTATCCATATTTTTGGTAGAACAAAATAAAAATTAACCTTTGTGAG CATGAGAGCATCATTCAGTTCTGTCAATCTTAGAAAACTTCTCTTCATTGAAGATATTATTTGTTAATTAGTAATTCTGT TCTGTGTCTCTGCATCAAAGATTTTCCAAAAACTTGCTTTTGAAGCAATTTTCTCTACCCATCCTTCTATGGACTTTTCT ACACTCTTAACGGGGCAAAGCAATATCATGACGAATGTATCACCCTTGAAGACTCCACTCCACACATTCCTGTGTACAAC TGTACAGCATAATCTTGCTTATTTGGTGTATGATATCATCATCTAATTTTAAATTAAATAAGCCAACAAAAAGCTATCAC ACCGTTAAATAAATGAAAGGCACTGCATGAATTTTATGTAGACAATTTTTTGAAACCAAAAATTATTATATTTTTTGAAG AATTATTTCGTTAGAGGATCTTGTTATGTTGGAGACTATAAACCAATTTGGATAAACTGCTCAACAAGTACTTGTAGGAT ACATTGAAATGATCTTGCAAGACCTTTAAGTCTCGGAAAGGCTTTTTAATAAGTTCTCCCATAAATTGCAATAAACTTCT ACACCTTAAGTTCTGTAATCTCTTCGTAAGTATCTTTTAACTTATATGGGCCTTTTCTACTTATTTCAATTGAATAGCTA CCATCAGGATTTAGCTCCTCTAAAGTGAGCCACTTTAAGCTATAAAGTAAGCCATGTCTTTAAAGTGACTTCCTCACAGA TGTCAAATCCCTCCCATAAGCTAAATGCTAAACCAAACAGGGTTAATGTTTGGTGGTTAACCTTGTTTCTTCTTTTCTTC TTTTTTGTACTTTTTACAGTGCATTTCCATTTCATGTTCTATGCTCTTGTTTCTGCAGATCATGAAAATCCTTCTCCTCA ACCACGAAGATATAAACCTCCAAATGCTACTGCTGAAGAATTCCTTAACAGGCAAGCAGTAGTTTTCTAACATGTTAGGA TTCCTTTTAGAATTGATTCTAATGCCAAAAACAATTATGGGAAGAAGCTTCTATAAGTAGTGTCTGGGTGCCAGAATTGA GTCTGGGGAAAAATAAGTTGATCCAAACATTATAGGCAACTTTTGCAGCACTTATGCACCTTCTAGAGGCACAGAAATGG TAGGGCTGTATTCTGAAGTTACTAGTTCTAACACCTGAAGATTCTACATGTGCAGGTTTCAAAGAAATGCAACCCTTGTT GCATCTGGTGTTGTCAAAAACTTGAACAGAGTGGGTAACTATGTAAAAGACACGCTCGATGACGTTCTTAATAGGCGGCC CAAGTGAAGCTTACATCCGAAATTATTTAAATTTTACTCGTTGGCCATTTTCCTTTACTGGGGTCGATTTATCATTTTGT TTGTGACAGTATCTGTAACACTCACTAGTGTCAAAGTGTATATTTTCTGTACAATGATTCATACGAATAAAATTGCATCA TCATCCTAAAATTAAGAATGGTTTTCTTTTGTTTGTTTGTTTCTGTTATATTGATCTTAGTTCCTACCATGGACATGAAA TTTTGTGGTGGTTTCATGATATACCCCTTTATGTTTTTGGACTGGGAAAAAGGGTCCATGATAAGTTGTCCACTAATAGC ATGCTTAAAGTTCAGAGTTTTAAGCCCTATTCGAAAGAACTTATTTAAGCTTATCTTTTAGGATAAACGCTTATGGATAT ATTTGAGAGCGTTTATGTAAATAGTTTATGGCATATTCATAAGGCTTATTAATAACATTTTTTTAGTTTATCTCAATAAG TTTTCCATATGCTTATCGATATGTGTTAGTGTGATAAAATGCTTATTGTCAATTTGCCATAATTGATTAACAAAAACTAA TTTCACATATTTCATAAATGTTATGAATTAAGGTTATGTTTGACATTTAGC
CDS sequence (LotjaGi3g1v0514100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGTCACCGGAGAAGAAGCTGCAACAACAGCAGAAGCTGGAGGCGGTGGTGGTTGCGGCCAGCATCGGAATCCCAA TTCTAACGGCGGCAACCCGAATCCAAATCCGGATCCTAACCCGAACCCGATTGTTACCGGATCCAAAGGAAAATCGTGTA AGGGTTGCGCATACTACTCGTCGCTTCATAAATCCAAATCTAAAAACCCTACTTGCATTGGCTTCTCCAGAACGCTCCAT CAAGTACCCCCATATGTTGTGGGAGAAACTGAACTGGAAGCTTCTAAAGAGGGCCGCAGCCTTGCAAACTTCAAGTATGC TTGTATTGGATACTCTGTCTACTTAGACAACAAAGATTCTTCAGCTGACTCACAAGATAAAACTGCAAAATTGCCGTTTT GCGTTGGTCTTGAGGTGGTCTTGGAGGAGAAGTCTGCAACTTCACCTGTTGGCCATGTTCCTGCTCATCCACGTAAAGCT GAAGATCATGAAAATCCTTCTCCTCAACCACGAAGATATAAACCTCCAAATGCTACTGCTGAAGAATTCCTTAACAGGCA AGCAGTAGTTTTCTAA
Protein sequence (LotjaGi3g1v0514100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVTGEEAATTAEAGGGGGCGQHRNPNSNGGNPNPNPDPNPNPIVTGSKGKSCKGCAYYSSLHKSKSKNPTCIGFSRTLH QVPPYVVGETELEASKEGRSLANFKYACIGYSVYLDNKDSSADSQDKTAKLPFCVGLEVVLEEKSATSPVGHVPAHPRKA EDHENPSPQPRRYKPPNATAEEFLNRQAVVF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 47 | 47 | - | – | |
| PANTHER | 37 | 187 | 151 | 4.0E-60 | – | |
| PANTHER | 37 | 187 | 151 | 4.0E-60 | – | |
| MobiDBLite | 145 | 179 | 35 | - | – | |
| MobiDBLite | 155 | 169 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0514100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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