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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0515500 |
| Transcript ID | LotjaGi3g1v0515500.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NADP dependent sorbitol 6-phosphate dehydrogenase family protein; TAIR: AT2G21250.1 NAD(P)-linked oxidoreductase superfamily protein; Swiss-Prot: sp|P28475|S6PD_MALDO NADP-dependent D-sorbitol-6-phosphate dehydrogenase; TrEMBL-Plants: tr|I3T009|I3T009_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0515500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:93246991..93249463) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCAATCACCCTGAACAGCGGTTTCAAGATGCCGATCATTGGGCTCGGAGTGTGGCGGATTCAAGGGCAAGAAATCAA GGACCTCGTTCTCAATTCCATCAAACTCGGTTATCGCCATTTTGATTGTGCTGGTAAGATTGTGAATATGCATCTGATTT TGGTTTTGATTTTTGATGATTTGATGAAGTTTATTGACGAGATTTCAATGTGTTGCAGCTGATTACAAGAACGAACCAGA AGTTGGAGAAGCGCTTAAAGAAGCTTTTGACAGTGGCCTTGTGAAAAGGGAGGATCTTTTCATCACCACCAAGGTAATGT AATGTGTTTTGTTTATTTTCTGTGATTCAGTCAGAATCAGATAATTACTTTATTAACAACCTTGCTGCTTGATTGAATCT GCTTTCAGCTTTGGAATTCTGATCATGGGCATGTTCTTGAGGCCTGCAAAGACAGTCTGAAGAAGCTTCAGCTAGATTAT CTGGATTTATATCTTGTTCATTTTCCTGTAGCCACTAGGCATACTGGTATGTTGGCTACTTGCTTTCTTGTCACCTTTGA ATCTATCTTTTTTCTGCATGAAAGGAATGATCTAACTCAGCAGAGTGTTTTAGCATATTGGATTGATAAAATACAATGAG CTTTAACTAAATTGAATTATTGGGGTCTGATATATGCATAAATATCTTACTCCCTTGTTAAAACTGTTTTAAACCTTTTA AATGTTATATCTTTGTTTCTCTTTTGGTGGTCTATCTCTCTTGTTCTTCTGTTTACATGTATGTATTTCATGAAATTAAT ACCTATTAGATTAGATGATATTGTTTGGTTATTTTAACCTAGGAAGCACTGACAGTACATATGTTTGCGTGTGCGTGTCC GATCGTTTCATATTTGTGTCTGTGTCATGTTTAGTGTACATGTTTGCGTCTGCACTTTGTAGTTAACAAGTGATTTAAAA GTCCATTCATATGTTCTCTATATGATTTTTTCATATACTACATCTACATGCATGCAGGGGTTGGTACTACTGATAGTGTG AAGGGTGAGGATGGAGTCCTGGACATAGACACCACCATATCCTTGGAAACTACCTGGCATGCGATGGAAGGTCTTGTTTC GTCGGGCTTGGTTCGCAGCATAGGGATCAGGTGTGATTTTGTGCTGCTAACAATCTTCTCTGTGCTCTAGTAGATGTGCT GGAAATCTTTTTATTTTTATGACTGCAGTTTATGTGATAACTGGTAAGCTTTAGTCATATGTAAACACTTAAAATGAGGG TTGGTATGATCACATAAGCTTTATTCTGCACTACGCTCCAGTAGATGCTCTGGAAATCCTTTGTGTGATAAGCTTTATCC AGTAACTTGATGACACAAAATTTAATTTCATCAAGGTTGGTGTGGTGACAGTCTCTCTTTAGCCATTACTCACACATGAT TTTAATTGCACCTTTCAACTCCTTGATGCAAGTTTACTTATTTTGGGATGATTAGAGACTTGCATGCAGGCAAGGTTTTT TGCAAAATCCATCATATCATTAATAACGGTCTCTTCAAGTAACTAAGCAATCAACTTCATTGACTTGTATATATACATGT AATAAATACATATTCTAGACTTCTTGTATTTGTATGTTGATTTTTTCATCCTTATCACATGTTTCTAGTACTGCTTAGCT ATTACCAGTTTATCACTACTTCTAGTGGGATAAGGCTAGGTTGTCATTGCTTGTTGTTAGCCTCACCTATAATGAAAGAG GAATAAATTGAATACCCCATGGAGGTTTAATTTTCGTGGTCTAGATGTTCCTAGTATTGACTTGAGAAATGTTTGATTCT ACTAAATGAAATTAGTATCTGACAGAAAACTATTTGCAGCAACTATGATATCTTTTTGACCAGAGATTGCTTAGCATATT CCAAGATAAAGCCGGCTGTAAATCAGATTGAAACTCATCCATATTTCCAGCGTGACAACCTTGTCAAATTTTGTCAGAAG CATGGGGTTAGTGTCACAGCCCACACTCCACTGGGAGGTGCTGCAGCAAACACGGAATGGTTTGGTTCAGTTTCATGTTT GGATGACCAAGTTCTCAAAGTGAGTTATCATTACTAGTTTGCAAACACTTATTACTATCCAGTTGTCGTATTTGCGAATC ATTGTCTATCCCAAAAACAATAATTGGCAGCCCAGAACATGAGTTGAACTAATATGAGAGTCTATAATTTCTTTGATTTC AGGGTCTTTCTGCAAAATACAAAAAGACCACTGCGCAGATTGCTCTTCGCTGGGGCATTCAAAGGAACACTGTGGTCATT CCTAAAACATCAAAACTGGAGAGATTGAAAGAGAATTTCGATGTATTTGATTTTGAGTTGTCTAAAGAGGACATGGAGCT CATAGGAAGCATAGACAAGAAATATCGGACTAATACCCCAGGCATATTTTGGGGCATAGATCTCTATGCATAA
CDS sequence (LotjaGi3g1v0515500.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAATCACCCTGAACAGCGGTTTCAAGATGCCGATCATTGGGCTCGGAGTGTGGCGGATTCAAGGGCAAGAAATCAA GGACCTCGTTCTCAATTCCATCAAACTCGGTTATCGCCATTTTGATTGTGCTGCTGATTACAAGAACGAACCAGAAGTTG GAGAAGCGCTTAAAGAAGCTTTTGACAGTGGCCTTGTGAAAAGGGAGGATCTTTTCATCACCACCAAGCTTTGGAATTCT GATCATGGGCATGTTCTTGAGGCCTGCAAAGACAGTCTGAAGAAGCTTCAGCTAGATTATCTGGATTTATATCTTGTTCA TTTTCCTGTAGCCACTAGGCATACTGACACCACCATATCCTTGGAAACTACCTGGCATGCGATGGAAGGTCTTGTTTCGT CGGGCTTGGTTCGCAGCATAGGGATCAGCAACTATGATATCTTTTTGACCAGAGATTGCTTAGCATATTCCAAGATAAAG CCGGCTGTAAATCAGATTGAAACTCATCCATATTTCCAGCGTGACAACCTTGTCAAATTTTGTCAGAAGCATGGGGTTAG TGTCACAGCCCACACTCCACTGGGAGGTGCTGCAGCAAACACGGAATGGTTTGGTTCAGTTTCATGTTTGGATGACCAAG TTCTCAAAGGTCTTTCTGCAAAATACAAAAAGACCACTGCGCAGATTGCTCTTCGCTGGGGCATTCAAAGGAACACTGTG GTCATTCCTAAAACATCAAAACTGGAGAGATTGAAAGAGAATTTCGATGTATTTGATTTTGAGTTGTCTAAAGAGGACAT GGAGCTCATAGGAAGCATAGACAAGAAATATCGGACTAATACCCCAGGCATATTTTGGGGCATAGATCTCTATGCATAA
Protein sequence (LotjaGi3g1v0515500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAITLNSGFKMPIIGLGVWRIQGQEIKDLVLNSIKLGYRHFDCAADYKNEPEVGEALKEAFDSGLVKREDLFITTKLWNS DHGHVLEACKDSLKKLQLDYLDLYLVHFPVATRHTDTTISLETTWHAMEGLVSSGLVRSIGISNYDIFLTRDCLAYSKIK PAVNQIETHPYFQRDNLVKFCQKHGVSVTAHTPLGGAAANTEWFGSVSCLDDQVLKGLSAKYKKTTAQIALRWGIQRNTV VIPKTSKLERLKENFDVFDFELSKEDMELIGSIDKKYRTNTPGIFWGIDLYA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 291 | 291 | 2.8E-115 | ||
| PIRSF | 1 | 291 | 291 | 2.0E-101 | ||
| PANTHER | 2 | 290 | 289 | 4.6E-157 | – | |
| PANTHER | 2 | 290 | 289 | 4.6E-157 | ||
| SUPERFAMILY | 3 | 283 | 281 | 4.45E-96 | ||
| CDD | 3 | 273 | 271 | 8.55051E-83 | ||
| Pfam | 14 | 273 | 260 | 5.4E-51 | ||
| PRINTS | 33 | 57 | 25 | 5.7E-53 | ||
| ProSitePatterns | 37 | 54 | 18 | - | ||
| PRINTS | 91 | 109 | 19 | 5.7E-53 | ||
| PRINTS | 128 | 145 | 18 | 5.7E-53 | ||
| ProSitePatterns | 128 | 145 | 18 | - | ||
| PRINTS | 162 | 191 | 30 | 5.7E-53 | ||
| PRINTS | 209 | 233 | 25 | 5.7E-53 | ||
| ProSitePatterns | 242 | 257 | 16 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi3g1v0515500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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