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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0520400 |
| Transcript ID | LotjaGi3g1v0520400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transcription factor; TAIR: AT4G35040.1 Basic-leucine zipper (bZIP) transcription factor family protein; Swiss-Prot: sp|Q8VY76|BZP19_ARATH Basic leucine zipper 19; TrEMBL-Plants: tr|V7AFW2|V7AFW2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0520400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:93676875..93683334) extracted from Lotus japonicus Gifu genome v1.2.
GGAACCAAAGTTTTTGGGGCCCCCATTGGGAATTATTGAATTTGATTCATTCAATACCTGAGAAAATAACATTATTATTG CTTGAAAGTTGAAACACGTATAAATAAATTGAGAGCGATTGAGTTGAAAGGAAGCCAAAAAGTAAAAGAAAAAGAAATCA TCGTGGAATCAATCTCTCATCTCAACCTATCGCTTCTTCTTCCTCTGTCTTCTCTTCTGGTACGTTCATTTTTTTTCTCA ATTAGGGTTTCCAATTCGATTCAATCACGCTTAATTTCTCCATCAATTCAACCCTTTCACTTTGCTCCTATTCAATTGGA GAAAATTCCCATTCACGAACGGTGTTTTTTTTCCGACCAGGTGGTGGTTGTTGCAGCGGCGGCGGCGGATTTGGTTGCGA TGGAGGACGGCGAGCTCGATTTCTCCAACCATGAAGTGTTCTCGAGTCCTAACATTGGCGGCGAGATTCCCAGCAGCGGT TCCATGGACAGTTTCTTCGACGAGCTTCTCAAGGACACGCACGGTTGCACCCATACCCACACGTGCAACCCTCCTGGACC TGACTTCTCACACACCCATACATGTTATCATGTTCACACCAAGATCGTGCCTGTGACTTCGGAGGATCAGGTGAACAACA CTGATGACACTGCTGAGTCTGCTGAGAATGGAAATGGGGATAACAGTGGAAGCAGTGGTAAGAAGGGTAGCAAGAAACGG CCAATTGGGAATAAGGAAGCGGTTCGGAAGTACCGCGAGAAGAAGAAGGCGAGGGCTGCGTCGTTGGAGGATGAGGTTGT TAAGCTGAGGGCTTTGAACCAGCACTTGATGAGGAAGCTGCAGGGGCAGGCTGTGTTGGAGGCCGAGGTTGCGAGGTTGA AGTGTTTGTTGGTTGATATCAGGGGGAGGATTGAAGGGGAGATTGGGTCGTTTCCTTATCAGAAATCGAATAATTCGAAC ATGGCGGGGGTGAATATGCCCGGTTCTTATGTGATGAACCCTTGCAACTTGCAGTGTGAAGACCGGGTGTATTGCCTTCA ATCAGAAGATGGGAGGATTGCTGAAGGCGGTGCGTCGCTGAACGGGGATGGGTTTGGTGGGTGTGAGTTTGAGGGCATCC AGTGTCTTGCAGGGCAGAATCTGGGGCTCAAGGATCTTCGTGGTTGTGGAGGTGGGCAGGCTGTGTCTAATGTCAACTCT GCTCCATCTAATAAAAGAAAAGGTGTGGTCACTTGATGGCTGATTGATTGCACTCAATTTCTGATTTTAATTTTGGTGCT TAATTCATATTTATTCATACCTGATTTCATTATAGGATATGTTTGTGACTGCGTGTGAGAGGCCATATACGCGCATAATT TCTGATTCTAGAATTACTTGCTTTGAGAAAAACGCATATACGAAGGGACACTAAATTGCTGGTGCATGATTTGATGATTG TTCTGCCTAGAATGTTTGGTCATTGTCTCTGATCTAGTACAAATTGTGTGTTTGGTTATCTAGTTTTGGCCTTGTAAACG CTCAATATAGAAAGCCCTGAGATTTGAGAGAAAGAAATAGAGTGCAAAATGGATGAAGCATCCATTGCTTGCTCTGAATG TGACTTGCTGCTTGTTTTCTGTTAAGTCCTAAACAGTCACTAGTTAAGAAATCAGATGTTCATACACATACAGTAACAGT TTTATTTTATTTTCTTTTTGCATTATGTTTAATTGCTAAAATTCATAATTGTCATGAAGTTCTAGTGCTGAAATCTGATT GCTAGATTTTATATATAGGATGATTGTTAGCTGATGTGAGAGTGCCACATTTTTAAGTTATTACCAGTCTCACTGAATCT TGTAAACTACATGATGCTATATACATGTATGAGTTAACATTCTTTCCAACTTTAACAAGGAAGGCTGAGACTGAATCTTT TTTTTTAATATGATAATATTAATTTCTTATCTGGTTATCCCCATTCCAAAAGAATTGAGATTGAGTCCATCAAAGTGTGG TTGCATTTTCCCTCAGTCGGGAGGCTTCGTTGCTAGTTGCTACTTGATGTCACTGTGGGTCTCTCCACCCACTCTTAGTT TTGTTTTGTCTTGGTGTTCGTCTGTGTTATCCATTTTCTAATTGGATTGAATCTGATGTTAATGACTTTAGGACATGGAA TTTGCATATTTTTTGTCCTTATCTTGCTAAGTGATCTGATGGACTTACTTTTATACATTAGGGGGATCTCGTGCAGCAAC AGCGGGCTGAAGAATTAATAAAGTGGTGGTTTTCGTTGTTGACATGGTAATATCTCCTTCGAATAACTTGTTACCAGTTG CAGCATCAGCTATCCATCAAGTCATTTTTGTAAATTATCTTCTCTTTTTGACCCGCTACTGCATTGTCGAGCTCTGGATG GCTGTTCTACTATGGAGGGCTAGTAGTTGATAGATGTTTTATTAAGCAAAAGCAGGAGTTGATCAGTAGTCAGCATAGCT TATGGCTGAGGCGAATTTGGTGCTTTTCAATGCAATTTTTTCATGGTGTTTTGATTACGCCTTAAACTGACATCGTAATT GTTTTCTGCTGATACAATTTTAAATCTGCTAATTATTTTATTAGTTTTTTGTTCCGTTTGATGCAAATGCTGTTTAAGTG GTGATTCATGTTTTCTAAGTTCGCAATTTTTTTATTGCTGGATTACAGAACTTGGGGATGATGGGGGGCTGTGTTTCATC TTTCGGTACTTTGTGGCTTTGTGCTGTGGGCAGGTGAGACACCAATGTCATTTTGTGTAATATAAACTCTTGTGTGAGTG AAACAATAAAGCTGGCTTGTGCGGTTGACGACGGCGTTGCTTTTATGATTTTATATTTTTCATCTCTATTCCTCTGAGTA GATTTACTTCTGTCTTTAGCGAATTGCTGGACATCGGTTGATGACCGTAGTTTATATCCGGAAGAATTGCTGGACATCGG TCGATGATTGTAGTTTATATCCAGAAGGAACTGTTGTCGTCTAGGTGAAGATTTTGCGTGTGGCCTTCTGTTTTCCACAA TTTAAGACAAACAAGTGAGTTTGAATTTGAGAACGCAAGTGGAGGTTAGATGGAACTTTGCTACCTTTAGAGAGCAATGA TTTCGCTAATTCCAGAGCCTCTTGACAATCCTATATTGGACTTGGAATGATGAATAAAACACATGATTGATGATTGTATC TTTTACTTCGAATAACGTTGTTCGTTCACCGTTGGGGATAAAGTTTGTAAAAATTTCCCCGCATTTAGTTGCTAATTGAA ACGTAGTATAGTACAGCACATTGGGGGTTTCAAGACGAAGTAAACTTAACACCATTATAGCTTACTGTCTCAAGTTCTCA GACATCAAGATTGGGATACGTTTTACACTAAAATAACCAAGCACCTATATAACCATAATTTAGTTGTTAGGAACTCGTGA ATCATCATGAATTAGGATAGCATTGGTTGGCGCAAAATAGGAAGAAATGTTTGATATTGCCGAAACTAACGTCATAGTTA TCGACTTGCGGAGAGGGTTATTTAATTAGTTAACACCATTTAAAATGTCATATAAAACTGAAGTTTCAGAAGATGACAGA AGAAATTTATATCGAACATGTGAGCTACAGAAGAAATTTATATCGAACAGTACGAGGATACTTGTGGTTTAAACCATAAA AGGAAAAAAATTGCCTTAACAATGATAATGTTATGTCATAATTGTTTCAACTCTTAACCATCGCAATACATTAGCATAAA ATTTGGTAGTAAACTTCAAAGATAGCAAAACATTCAAACAAAACAACAAAGCTTTGAAAGCAATGACATGGAAAGCATGG CCTCCGAGCTTGGGTCTGGTTAGTGTTGGTCATTAGCAGCATACCACATATCTTCGTCGTCACCATCATTGTAAATGCTA TCAGCCATTTGCCAGACATGGAGAGAATTTTCCTCATCTACACTTGAGATGACCCATGGCTGGTTTTGGTTCCATGAAAA ATCTGATATTTTCCCTTTGTGACCACCATGAGAGAAGAGTAGTTCAGGAGGACCGCCCTCACCATCTCCCTCTATCTGCT CATCCCCAACCCTGAATTATCATGAAAATTAAGCATGAAGTGCAGGGCCAATTTTAATACTCAGTTTGTAGAAGTGTCTA GTATGTTTGTACATGTGCACCTGAATAATCTTTTAGTACAAATCAAACTAAAGTAACAATTTTCTAAGAAGGAGGGGGAA AACTTAGCATTCTTGAGGAGTCTGTTCCTACCTGTTAATGTCCCAAACCATCAGCCGTCTGTCAGCACCAGAAGAAGCCA ATACAGTCTCGTGATTAGGATCCCACTCTACCTGGAATACCTCATCTCTGTAAATTATGAATAAACCAAAGAGGTGAGAA AAAAAAATAATGGAATTCCCTAAGCTTAGAACTTAACAGTTCTCTCTCATAAGAAATGGTATCGAGTATCTACAGAGCAA CAAAGATAAGTACTTAACCAGCAAACCTAGCCATTGTTACTGCAAGTTAGTAGCAGTACCAAGAAAAACACAATATAACA GATGAAGTACGTACGTGTGGCTACTTAAAACATGAACCGGTTCCATCAGCTTCCGTGTATCAAAGAGACCAATGGTGGTG TCTGAGGATGCTGTAGCCAAAATCCATTCATTATATGGACTGAAAGAAAGGAAGTTCACCTGATTCAAAAAAGAAAGCAG AGTATAACATTGTCAGTGAAAAATTATAATCCAGCAAAGGGTCAAAAAGAAGAGAAGACAAGGCCAAAGTACAAAACAAC ATCAGGAAAATATTATCAGCTTTACTTAAACAACAGCGACAAACTACCAAAAATGAAGGCATAATCGAACACAGTACAAG AAACAGTATTCCCTCATGGTCCAAACAAATTGCAGTGTTTAACAAACCCATAGCATGCAAAAAGCCTAATGGGAATGTTT TCATAATCTTATGCTATCAGTAGAAAGTATAAAGATCTTCAATCACAAATTCAGGTAATTCTAATTGATAGAAAACATGA ACTTCTGCTCTATTACATGCTTAAAGAACAATAAAAGATACTGCAAGGATTCTGAAGTAACAACATTACCTCCTTCTCAT GTGATTTGACAGATTGTTGGGCTTTGTTTGTCCGCAGGTCCCAAATTACCAACTTGCAGTCATCCCCAACAGACCCAAAT AAATTTTCATTCTTCAAATGCCAGGATACATCTTCCACCACATTTTCATGGCCCTGACATGACAATCAAAAGTTCAATTC TATCACTAAAGCAGCAAAATCAACCAATCAGGCGAAATTCCAATTCAGCACAGCATACAAGCATCAAACAATCAACATTG TGTTACCTCATAAACATGAACCGCATCAAGCACGCTCCCTTTCGAATCAGCCGGCACATCCCACAAGCAAACCTTGTGGT CATTTGAACCACTCAAAAGATACCCACTCTTAAAAGGGCTCCAGGACAAGCCAAAGCCTTCCTTATCATGCCCCCTCAAC CTCAAATCAGGCTCATTCCCATCCCCTCGTTGCTTCGCAAAATCAAACACATAAACCTCGGAGCTACAAGTCTTGGCAGC TACAATATCAGCGTTCTGCGGCATGGATCGCGCTCGATTCACCTCCCCATCAACAGGAATCCTCCGGGTAATCTCCACCT GCAAGTAAAACCATTGCGGCATTTCATCGAACAGTTGGTACCCATAAACAAAACAAGCAAACTTTAATAGAAACAAGCAC AAACCTTAGGTAAAATGGGGTTTTGAGGATCAGCGGCGACGATGGGCTGCAATGTGTTTACAGGGAGGGTGACTTGGCCG AGCATTAGGAAGTTGGGTTCGTCGTCGGCGGTGTGGGTGGCTAAGAGGATTGAGTGGAGGTTGAAGGAAGAGTTGGAGTG GGGTTGAGGAGTGGATGGGAGCCATTGAACGGTGAGAGAAGGCCATACAAGAGGGTGAGAGATGAAGAAATCGTACAACA GAGGAGTGTTCTTCTTCCAAACGGAGAACTCTTCTTCAACCTCTGCCTCTGTCTGTGCATTCTCGTGCTCTTCCGCCATT TTTCGTTTTCTGTGCTTCGAAGCCCTTGTTTTCTCGCGCCAAAAAATGATGCAACGTTTTTATAGTGGATACACTTGGGC TTCACTGGGCTGGGCTTCAATTTCATCTCAAAGCCCATTATCTGCTCCATCATCCATGTTCTAGCCCTTTCTTTTTCTTT TTCAATATCATTCTTAAATCTCATCCTTTTACTTTTGCACTTTTTTTTGGTGCTATGCAATTGCTTTTTCCTCTTTTCGT TTTGCTTTCACAGTTGTGAAGGTGACATTCATTCTCCTTTTAAAAGCAATCAATTAGAGAGGTTCCATTGAAAATTGGTA TTCAAATACCTCTTCACTGGAAAATTTGGATTAAGATTCATTAGGTGGGTTGATACTGTC
CDS sequence (LotjaGi3g1v0520400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGACGGCGAGCTCGATTTCTCCAACCATGAAGTGTTCTCGAGTCCTAACATTGGCGGCGAGATTCCCAGCAGCGG TTCCATGGACAGTTTCTTCGACGAGCTTCTCAAGGACACGCACGGTTGCACCCATACCCACACGTGCAACCCTCCTGGAC CTGACTTCTCACACACCCATACATGTTATCATGTTCACACCAAGATCGTGCCTGTGACTTCGGAGGATCAGGTGAACAAC ACTGATGACACTGCTGAGTCTGCTGAGAATGGAAATGGGGATAACAGTGGAAGCAGTGGTAAGAAGGGTAGCAAGAAACG GCCAATTGGGAATAAGGAAGCGGTTCGGAAGTACCGCGAGAAGAAGAAGGCGAGGGCTGCGTCGTTGGAGGATGAGGTTG TTAAGCTGAGGGCTTTGAACCAGCACTTGATGAGGAAGCTGCAGGGGCAGGCTGTGTTGGAGGCCGAGGTTGCGAGGTTG AAGTGTTTGTTGGTTGATATCAGGGGGAGGATTGAAGGGGAGATTGGGTCGTTTCCTTATCAGAAATCGAATAATTCGAA CATGGCGGGGGTGAATATGCCCGGTTCTTATGTGATGAACCCTTGCAACTTGCAGTGTGAAGACCGGGTGTATTGCCTTC AATCAGAAGATGGGAGGATTGCTGAAGGCGGTGCGTCGCTGAACGGGGATGGGTTTGGTGGGTGTGAGTTTGAGGGCATC CAGTGTCTTGCAGGGCAGAATCTGGGGCTCAAGGATCTTCGTGGTTGTGGAGGTGGGCAGGCTGTGTCTAATGTCAACTC TGCTCCATCTAATAAAAGAAAAGGGGGATCTCGTGCAGCAACAGCGGGCTGA
Protein sequence (LotjaGi3g1v0520400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEDGELDFSNHEVFSSPNIGGEIPSSGSMDSFFDELLKDTHGCTHTHTCNPPGPDFSHTHTCYHVHTKIVPVTSEDQVNN TDDTAESAENGNGDNSGSSGKKGSKKRPIGNKEAVRKYREKKKARAASLEDEVVKLRALNQHLMRKLQGQAVLEAEVARL KCLLVDIRGRIEGEIGSFPYQKSNNSNMAGVNMPGSYVMNPCNLQCEDRVYCLQSEDGRIAEGGASLNGDGFGGCEFEGI QCLAGQNLGLKDLRGCGGGQAVSNVNSAPSNKRKGGSRAATAG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 254 | 254 | 1.0E-105 | – | |
| PANTHER | 1 | 254 | 254 | 1.0E-105 | – | |
| MobiDBLite | 1 | 31 | 31 | - | – | |
| MobiDBLite | 11 | 25 | 15 | - | – | |
| MobiDBLite | 73 | 99 | 27 | - | – | |
| MobiDBLite | 73 | 123 | 51 | - | – | |
| Gene3D | 99 | 167 | 69 | 6.6E-8 | – | |
| SMART | 99 | 166 | 68 | 9.6E-9 | ||
| Pfam | 104 | 149 | 46 | 3.5E-11 | ||
| SUPERFAMILY | 106 | 148 | 43 | 1.31E-6 | – | |
| CDD | 107 | 158 | 52 | 1.89667E-11 | – | |
| Coils | 112 | 146 | 35 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi3g1v0520400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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