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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0529600 |
| Transcript ID | LotjaGi3g1v0529600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | SET domain-containing protein 9; TAIR: AT5G23200.1 C5orf35; Swiss-Prot: sp|Q8NE22|SETD9_HUMAN SET domain-containing protein 9; TrEMBL-Plants: tr|I1LIR8|I1LIR8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0529600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:94654452..94658563) extracted from Lotus japonicus Gifu genome v1.2.
GCATGGAATAGAAGCATATGCGAAGCTTGTTGGCACTGTGAAAGCTTTGAAGTTAAACACTTTGAGCTGAGACTAAGAAG GGTGGGTAGGTCCGGTCTGCAACATTGATGATTTGTGCTGTTGAATTTGGATCAACAATTCCAGTAATGCACAGGAAAAG CAGTCAAATTTGATCAAATTAGCATTACCAGCAAACGAGGTAATGTAATGTTGATAGGTTGCCTACAAGGTGTTTGTAGA AATGCTGCTGTGGCATTGCATAGTTTAAGTAAACTGTTTTTTTGTTTTGTTCTTGTACTACTTCACTTGATCTTTCTCTC ACTCTACTTTGATTTATATACCCCAGTTTAATTTTCTGTCCAAGTCACAAACTTTCTAACTCTAACTTGCTACTTTCTGA CTTTGTTGTATTGATTAAGCCACTCTTTTTCTCTGGCAGCACATTTCCAGTATCTACAACTTATTGTGCATGAAAAGCAT GTTCGGTTGTCAATAGCAGCTTCGTTGTCAACTAGTCACCAATGGCTTTTTTATTTCAGAAATTTCAAGAGGTATCTCCT TATCTTATGGTATATAAAAAGAACAACTTGGTGCTCTAGAACTCCTACTATGTCGAGGTCTAGGAAAGGGTCGGAGCCCC TTAGTGTGTGTTTGGATTTCTGTTGAACTCAATGTGAATCAATGTTGAAGCCAACATGTCAAAATTTTGCTTCTTTGATC CACATTAAACTCAACATGACAAAATCTAGCTTTTCCGTTGGTGTCTTGAGATACGTGAAATGGCGTTAGCGTTGGCTCTG AGGCCAAACCAAACGTGCACTCCCTTGTATATGAAAAATAAGTTCTTTTTGCTGTGAATATGCTCAAATATGTTGGTGTT CTTGGGACCCCCTCAAGTTCAATGGAAAATTATCAGAAATTACTTTCAACATCAATCCTATATTTTGTTGCATTGGCTTT TCATGCTTTGGAACTTGTGACATTCAAAGAGAAAGTACTTTCAATTTTTATCCAAACATGAAATTGTTATGATCCATATT TATAAGAATGTGTCAATCCTACTTGTGATAAATGACATGTGGTCTCTTCTCTAGAAGGAGTGACTAAAGATCACTCAGAG GGCAATACATTTTGTTCACGCAGTACAGCAGAATCTATTGTGCTAGATGACTTTCTGTGCGCTTCTATCGTGGAAGTTTG ATAGCTTATTCTTGTGTAGATTACAGTGGTAGTTCTTAAAAATGTTGTGCTTTACCAATTCTCTATAGTTTTATGCTATG CTAAAATATAGTTTTTACTGCTTTGCATCCTGTGAGATTTTTCATAACAATCTTGGTCTGAACTTTGTTTTCAGGCTGTG AAAACACTTGCAAAAAGTCCTACTTTTGCTAGGGACCCGAAACATCTACAATTTGATGCTGATATCAATCGTTTGTTCTT TTATACAAGGTAAGTGTTTTTCTGTTATCAGTGTTTGATAACTAACTGTAAGGGTGGATTAATTATGAATTTTCGTTTTT TTTTTGTGAATCATGAAATGCTGTTAAGTTTTCTCTTTTTTGTTTTTCGCACTTCTTATCTTTCTAACTTCTGCCATATT AGAGGATAATTTGCTGTCTGTGCTTTGTTTCACATATTAGCCAATATTTTGGTAAACTCAAACTTAAAATTTCCTTCTCT TATCTCACTGGGGTTAGTTTTGAGTTTTGTTGATATTTTGGGAATTAGATGGAAAAGAAAGAGAGAGATAGAATGGTTCG ATGCAAAAGACTGACTTTATATTTGCATATTTGGGAATCAGAAGGAAAAGGGAATGATAGAGAGAGAATTGTTCAATACA AAAACCAGACTTTATATTGCATATTAATAACAAACAGAGGTGCTCTAGCCAGTCCAATGGGTCTGTCAACATTCAGTTCG GCTAGAAGCTTATTGGATTAAAAATGGTTCAGGAGGCTCAGATAGAGTCAGAGTGAGTGGAAATATCTTCAGCTGTGGTC TTCTATGTATATACTTTACAGCGGCATTTGGATATGATTATATTTGTTTTTCAAAAGTACATCATCTGGATAGGCAATAT AGAAGGCCACCACTTTGACATTAACAGCCAGATCTCTAAACTGAGCTACCAAGACAAGCTGTATCGTTTTAGTTAGCCAA TTAGGCATAGCTTAAATGGTCTTCTTCAGAATTTCAAAACTTCAAACTATTGCCCTATATTTAAAGAATGACGAGTCTTA CTTATGAGATAGAAAATCAACAACATTTATTGCCCAGGGGAGATTCTAGTAATATGTTTCTTATATGAAGGTAGTGTTAT TATCTTAGACTACAAAGTACAACTGTTCCTTGGGGGACTCTGCCTTGATAGCATTAAGTTGGCCTTTTATAGACCTAGTG GATATCCCTTCAAATAATGCTTGACTCTTTCATATCTTCAATTTTAAGTTTTCATTGATAAATTGTTGTCTAAAGATGCT ATTGCGGGTTCATATAACTTAAATACCTAATATTTCAATTTTGCTGTGGATGTGATTCTTTTCCCTTTTAACATCTCGAC ATATTTTGCTCATGCTAAGACTTAAATATCCAGCTACAATCGGTTAGGGAAGGATGCTGATGAAGCAGACGCAGAAGAGA TTATTGAAATGGGCAGTAAAGCCTCAGTTGCTGATCAAAAGATGCAAGTGGAAGAAAATGTTCATTCTCAAGTAAAAGCC TTTTGCACGTTCATGGATGAAATACTTCGTTCAAATGAAAAGATGGTGACTGACTCCTTTGAGTTATCTCTACAAGCAAA CACTTTGCCTCACCATAGTGGAACTAGTTCAGCTAAGGGTCGGTGTGACCCACCAACTAAATATCCTGGTGAGTTAACTT TTGTTTTAATTTCCTCCTTTTGACTTGTCATTTGGCTATATAAAATAATTTCCTCTTCCCTTGGATCCAGTTCCAATGTG GTATATAAAATTAATCGGTTCTGTAGCAATGATTGTACCTTTATTTGTTTATTCATATCTTTCATGTTATTGTGAAATTT TCTAACCTTCAACTCTTTATTTATTGATGTGTTTGTTGCACAGCTGCCTCTAAACGAAGGCCATTAAGCCAAGCTGAAGT TTCTCAGAAATTAAAGGATCAAATTGGCTACAGTCTTGATGTGAGACCTTCTCAAATATCTCACAAGGATGCTGGGCAAG GTCTATTTTTAGATGGGGTAGCAGATGTGGGTGCTGTGCTAGCCTTTTATCCTGGTGTAGTCTACTTTCCATCTCATTGT CATTGTATTCCTGGATATCTTGATGAGAAGAACCCTTATTTGATAACAAGATATGATGGAACTGTCATTGACGCCCAACC TTGGAGTCGTAGAGGTGATCAGCAAGAACTGTGGAATGGTAGAAATATGTTAGAAAACAAGGTTGAAGTGGAAGGAGCTG AGAAAGGTGCAGACAGCCTAAGTAAGCCTTTGGAAGGATCCCAAGTAGATAGTAGCGATGATGTACTTGAGTGTAGAAAC CCATTAGCCTTGGCACACTTCGCTAATCACCCTGCGAAAGGGATGCTTCCAAATGTCATGGTTTGCCCTTATGACTTTCC ATTGACTGAAAACAACATGAGAGTTTACATTCCTAATATCTTATATAGAAATGCAGAGGTCAATGTGAAGAGTTTTAGCA GGTTTTGGTTCAAAATTGGGGTTTCAAGAAATAGTGAATCAAAAGTTCCTACTCTAAATACTGTTGTTTTGGTAGCAACT AGGGCTCTTCAAGATGAGGAACTACTTCTGAACTACAGGCTGAGCAACTCTAAGCGGCGGCCAGAATGGTATGCTCCATT GGATGAAGAAGAGGACATGAGCAGTTGAAACTAGCCAATATCTATTGGAGCCATAAGTCTCTGTAGATATTCAGAGCACA CCCTTTATCACGATGGTGGCTTAATGAAGTAATTTTTCCTAAGAAGCTGTAGTAGTCACAATTTTTTGGATGTTATCTTT AAGTAATAAGAATGAGGTCATTTTGTAACGGATGAAGTATGTGATGACGAAATTTTTATGAGATTTATTTTGGACATTTT GCACTTATCCATCACATTATAACAAGTTAAAC
CDS sequence (LotjaGi3g1v0529600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGCAGTAAAGCCTCAGTTGCTGATCAAAAGATGCAAGTGGAAGAAAATGTTCATTCTCAAGTAAAAGCCTTTTGCAC GTTCATGGATGAAATACTTCGTTCAAATGAAAAGATGGTGACTGACTCCTTTGAGTTATCTCTACAAGCAAACACTTTGC CTCACCATAGTGGAACTAGTTCAGCTAAGGGTCGGTGTGACCCACCAACTAAATATCCTGCTGCCTCTAAACGAAGGCCA TTAAGCCAAGCTGAAGTTTCTCAGAAATTAAAGGATCAAATTGGCTACAGTCTTGATGTGAGACCTTCTCAAATATCTCA CAAGGATGCTGGGCAAGGTCTATTTTTAGATGGGGTAGCAGATGTGGGTGCTGTGCTAGCCTTTTATCCTGGTGTAGTCT ACTTTCCATCTCATTGTCATTGTATTCCTGGATATCTTGATGAGAAGAACCCTTATTTGATAACAAGATATGATGGAACT GTCATTGACGCCCAACCTTGGAGTCGTAGAGGTGATCAGCAAGAACTGTGGAATGGTAGAAATATGTTAGAAAACAAGGT TGAAGTGGAAGGAGCTGAGAAAGGTGCAGACAGCCTAAGTAAGCCTTTGGAAGGATCCCAAGTAGATAGTAGCGATGATG TACTTGAGTGTAGAAACCCATTAGCCTTGGCACACTTCGCTAATCACCCTGCGAAAGGGATGCTTCCAAATGTCATGGTT TGCCCTTATGACTTTCCATTGACTGAAAACAACATGAGAGTTTACATTCCTAATATCTTATATAGAAATGCAGAGGTCAA TGTGAAGAGTTTTAGCAGGTTTTGGTTCAAAATTGGGGTTTCAAGAAATAGTGAATCAAAAGTTCCTACTCTAAATACTG TTGTTTTGGTAGCAACTAGGGCTCTTCAAGATGAGGAACTACTTCTGAACTACAGGCTGAGCAACTCTAAGCGGCGGCCA GAATGGTATGCTCCATTGGATGAAGAAGAGGACATGAGCAGTTGA
Protein sequence (LotjaGi3g1v0529600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSKASVADQKMQVEENVHSQVKAFCTFMDEILRSNEKMVTDSFELSLQANTLPHHSGTSSAKGRCDPPTKYPAASKRRP LSQAEVSQKLKDQIGYSLDVRPSQISHKDAGQGLFLDGVADVGAVLAFYPGVVYFPSHCHCIPGYLDEKNPYLITRYDGT VIDAQPWSRRGDQQELWNGRNMLENKVEVEGAEKGADSLSKPLEGSQVDSSDDVLECRNPLALAHFANHPAKGMLPNVMV CPYDFPLTENNMRVYIPNILYRNAEVNVKSFSRFWFKIGVSRNSESKVPTLNTVVLVATRALQDEELLLNYRLSNSKRRP EWYAPLDEEEDMSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 332 | 330 | 7.7E-174 | – | |
| PANTHER | 3 | 332 | 330 | 7.7E-174 | ||
| MobiDBLite | 55 | 85 | 31 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0529600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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